RNA–Protein interactions for RNA: ENST00000344113.8

SYNE2-202, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNE2, Length 21,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-202ENST00000344113 SLC46A2Q9BY10 475 aa3.54□□□□□ -1.84
SYNE2-202ENST00000344113 GPR173Q9NS66 373 aa3.54□□□□□ -1.84
SYNE2-202ENST00000344113 TMEM242Q9NWH2 141 aa3.54□□□□□ -1.84
SYNE2-202ENST00000344113 CLEC4EQ9ULY5 219 aa3.54□□□□□ -1.84
SYNE2-202ENST00000344113 NPTNQ9Y639 398 aa3.54□□□□□ -1.84
SYNE2-202ENST00000344113 A0A1W2PRV1 198 aa3.54□□□□□ -1.84
SYNE2-202ENST00000344113 ARNTLO00327 626 aa3.54□□□□□ -1.84
SYNE2-202ENST00000344113 WDR1O75083 606 aa3.54□□□□□ -1.84
SYNE2-202ENST00000344113 SOX14O95416 240 aa3.54□□□□□ -1.84
SYNE2-202ENST00000344113 CYBBP04839 570 aa3.54□□□□□ -1.84
SYNE2-202ENST00000344113 HOXC4P09017 264 aaPredicted RBP3.54□□□□□ -1.84
SYNE2-202ENST00000344113 EPHA3P29320 983 aa3.54□□□□□ -1.84
SYNE2-202ENST00000344113 GALNSP34059 522 aa3.54□□□□□ -1.84
SYNE2-202ENST00000344113 TMEM119Q4V9L6 283 aa3.54□□□□□ -1.84
SYNE2-202ENST00000344113 TMEM35AQ53FP2 167 aa3.54□□□□□ -1.84
SYNE2-202ENST00000344113 RNF165Q6ZSG1 346 aa3.54□□□□□ -1.84
SYNE2-202ENST00000344113 FAM183BPQ6ZVS7 135 aa3.54□□□□□ -1.84
SYNE2-202ENST00000344113 FBXW5Q969U6 566 aa3.54□□□□□ -1.84
SYNE2-202ENST00000344113 TMIGD2Q96BF3 282 aa3.54□□□□□ -1.84
SYNE2-202ENST00000344113 LYSMD1Q96S90 227 aa3.54□□□□□ -1.84
SYNE2-202ENST00000344113 CABLES2Q9BTV7 478 aa3.54□□□□□ -1.84
SYNE2-202ENST00000344113 TSPAN16Q9UKR8 245 aa3.54□□□□□ -1.84
SYNE2-202ENST00000344113 OTOGLQ3ZCN5 2332 aa3.54□□□□□ -1.84
SYNE2-202ENST00000344113 RPA2P15927 270 aa3.54□□□□□ -1.84
SYNE2-202ENST00000344113 PTPN3P26045 913 aa3.54□□□□□ -1.84
SYNE2-202ENST00000344113 FMO4P31512 558 aa3.54□□□□□ -1.84
SYNE2-202ENST00000344113 GCGRP47871 477 aa3.54□□□□□ -1.84
SYNE2-202ENST00000344113 OR5I1Q13606 314 aa3.54□□□□□ -1.84
SYNE2-202ENST00000344113 ZNF74Q16587 644 aa3.54□□□□□ -1.84
SYNE2-202ENST00000344113 ZNF571Q7Z3V5 609 aaPredicted RBP3.54□□□□□ -1.84
SYNE2-202ENST00000344113 OR6C68A6NDL8 312 aa3.54□□□□□ -1.84
SYNE2-202ENST00000344113 GSRP00390 522 aa3.54□□□□□ -1.84
SYNE2-202ENST00000344113 TYMSP04818 313 aa3.54□□□□□ -1.84
SYNE2-202ENST00000344113 ZNF25P17030 456 aaPredicted RBP3.54□□□□□ -1.84
SYNE2-202ENST00000344113 AKT2P31751 481 aa3.54□□□□□ -1.84
SYNE2-202ENST00000344113 NPBWR2P48146 333 aa3.54□□□□□ -1.84
SYNE2-202ENST00000344113 NUTF2P61970 127 aaKnown RBP3.54□□□□□ -1.84
SYNE2-202ENST00000344113 NKAIN2Q5VXU1 208 aa3.54□□□□□ -1.84
SYNE2-202ENST00000344113 CMTM4Q8IZR5 234 aa3.54□□□□□ -1.84
SYNE2-202ENST00000344113 OR8J2Q8NGG1 315 aa3.54□□□□□ -1.84
SYNE2-202ENST00000344113 OR56A1Q8NGH5 318 aa3.54□□□□□ -1.84
SYNE2-202ENST00000344113 SDSLQ96GA7 329 aa3.54□□□□□ -1.84
SYNE2-202ENST00000344113 KDM5AP29375 1690 aaKnown RBP3.54□□□□□ -1.84
SYNE2-202ENST00000344113 MASP2O00187 686 aa3.54□□□□□ -1.84
SYNE2-202ENST00000344113 CCND3P30281 292 aaPredicted RBP3.54□□□□□ -1.84
SYNE2-202ENST00000344113 CDC34P49427 236 aaPredicted RBP3.54□□□□□ -1.84
SYNE2-202ENST00000344113 HES1Q14469 280 aa3.54□□□□□ -1.84
SYNE2-202ENST00000344113 POU4F3Q15319 338 aa3.54□□□□□ -1.84
SYNE2-202ENST00000344113 HS3ST5Q8IZT8 346 aa3.54□□□□□ -1.84
SYNE2-202ENST00000344113 REEP6Q96HR9 211 aa3.54□□□□□ -1.84
SYNE2-202ENST00000344113 MSLNLQ96KJ4 702 aa3.54□□□□□ -1.84
SYNE2-202ENST00000344113 ALKBH4Q9NXW9 302 aa3.54□□□□□ -1.84
SYNE2-202ENST00000344113 ABRACLQ9P1F3 81 aa3.54□□□□□ -1.84
SYNE2-202ENST00000344113 FLT4P35916 1363 aa3.54□□□□□ -1.84
SYNE2-202ENST00000344113 F5H6K3 240 aa3.54□□□□□ -1.84
SYNE2-202ENST00000344113 LIPFP07098 398 aa3.54□□□□□ -1.84
SYNE2-202ENST00000344113 ACPPP15309 386 aa3.54□□□□□ -1.84
SYNE2-202ENST00000344113 KLRC2P26717 231 aa3.54□□□□□ -1.84
SYNE2-202ENST00000344113 PSMB3P49720 205 aa3.54□□□□□ -1.84
SYNE2-202ENST00000344113 HIST2H2ABQ8IUE6 130 aaPredicted RBP3.54□□□□□ -1.84
SYNE2-202ENST00000344113 CHST14Q8NCH0 376 aa3.54□□□□□ -1.84
SYNE2-202ENST00000344113 ZNF485Q8NCK3 441 aa3.54□□□□□ -1.84
SYNE2-202ENST00000344113 PIP5K1AQ99755 562 aa3.54□□□□□ -1.84
SYNE2-202ENST00000344113 H0YIN7 160 aa3.54□□□□□ -1.84
SYNE2-202ENST00000344113 HNRNPA1L2Q32P51 320 aaKnown RBP3.54□□□□□ -1.84
SYNE2-202ENST00000344113 DMRTA1Q5VZB9 504 aa3.54□□□□□ -1.84
SYNE2-202ENST00000344113 JMJD6Q6NYC1 403 aaPredicted RBP3.54□□□□□ -1.84
SYNE2-202ENST00000344113 SLC47A2Q86VL8 602 aa3.54□□□□□ -1.84
SYNE2-202ENST00000344113 OOSP2Q86WS3 158 aa3.54□□□□□ -1.84
SYNE2-202ENST00000344113 TWIST2Q8WVJ9 160 aa3.54□□□□□ -1.84
SYNE2-202ENST00000344113 NUDT11Q96G61 164 aa3.54□□□□□ -1.84
SYNE2-202ENST00000344113 WDR77Q9BQA1 342 aaPredicted RBP3.54□□□□□ -1.84
SYNE2-202ENST00000344113 ZNF670Q9BS34 389 aa3.54□□□□□ -1.84
SYNE2-202ENST00000344113 ELL3Q9HB65 397 aaPredicted RBP3.54□□□□□ -1.84
SYNE2-202ENST00000344113 GHRLQ9UBU3 117 aa3.54□□□□□ -1.84
SYNE2-202ENST00000344113 ADAMTS13Q76LX8 1427 aa3.54□□□□□ -1.84
SYNE2-202ENST00000344113 C8AP07357 584 aa3.54□□□□□ -1.84
SYNE2-202ENST00000344113 CREB1P16220 341 aa3.54□□□□□ -1.84
SYNE2-202ENST00000344113 CSNK2A2P19784 350 aaPredicted RBP3.54□□□□□ -1.84
SYNE2-202ENST00000344113 BMPR1AP36894 532 aa3.54□□□□□ -1.84
SYNE2-202ENST00000344113 SCNN1AP37088 669 aa3.54□□□□□ -1.84
SYNE2-202ENST00000344113 DCDP81605 110 aaKnown RBP3.54□□□□□ -1.84
SYNE2-202ENST00000344113 DGKZQ13574 1117 aa3.54□□□□□ -1.84
SYNE2-202ENST00000344113 KIAA0319Q5VV43 1072 aa3.54□□□□□ -1.84
SYNE2-202ENST00000344113 GATSQ8NAP1 163 aa3.54□□□□□ -1.84
SYNE2-202ENST00000344113 OR4K2Q8NGD2 314 aa3.54□□□□□ -1.84
SYNE2-202ENST00000344113 NXPE3Q969Y0 559 aa3.54□□□□□ -1.84
SYNE2-202ENST00000344113 PSMG3Q9BT73 122 aaPredicted RBP3.54□□□□□ -1.84
SYNE2-202ENST00000344113 CLDN16Q9Y5I7 305 aa3.54□□□□□ -1.84
SYNE2-202ENST00000344113 SOX21Q9Y651 276 aaPredicted RBP3.54□□□□□ -1.84
SYNE2-202ENST00000344113 CACNA1GO43497 2377 aa3.54□□□□□ -1.84
SYNE2-202ENST00000344113 TCRBV9S1A1TA0A576 114 aa3.54□□□□□ -1.84
SYNE2-202ENST00000344113 EFSO43281 561 aa3.54□□□□□ -1.84
SYNE2-202ENST00000344113 TGFB1I1O43294 461 aa3.54□□□□□ -1.84
SYNE2-202ENST00000344113 POMCP01189 267 aa3.54□□□□□ -1.84
SYNE2-202ENST00000344113 DUSP8Q13202 625 aa3.54□□□□□ -1.84
SYNE2-202ENST00000344113 NLGN4XQ8N0W4 816 aa3.54□□□□□ -1.84
SYNE2-202ENST00000344113 NLGN4YQ8NFZ3 816 aaPredicted RBP3.54□□□□□ -1.84
SYNE2-202ENST00000344113 SLC25A46Q96AG3 418 aa3.54□□□□□ -1.84
SYNE2-202ENST00000344113 PRR14Q9BWN1 585 aa3.54□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms