RNA–Protein interactions for RNA: ENST00000343575.10

CXCL12-201, Transcript of C-X-C motif chemokine ligand 12, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CXCL12, Length 1,857 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-201ENST00000343575 GRAMD2AQ8IUY3 354 aa13.46□□□□□ -0.26
CXCL12-201ENST00000343575 ARMC10Q8N2F6 343 aa13.46□□□□□ -0.26
CXCL12-201ENST00000343575 OR52J3Q8NH60 311 aa13.46□□□□□ -0.26
CXCL12-201ENST00000343575 KLHDC3Q9BQ90 382 aa13.46□□□□□ -0.26
CXCL12-201ENST00000343575 DEFB126Q9BYW3 111 aa13.46□□□□□ -0.26
CXCL12-201ENST00000343575 ZBTB20Q9HC78 741 aaPredicted RBP13.46□□□□□ -0.26
CXCL12-201ENST00000343575 ACOT13Q9NPJ3 140 aa13.46□□□□□ -0.26
CXCL12-201ENST00000343575 CTPS2Q9NRF8 586 aa13.46□□□□□ -0.26
CXCL12-201ENST00000343575 ERVK-18Q9QC07 812 aa13.46□□□□□ -0.26
CXCL12-201ENST00000343575 WASF3Q9UPY6 502 aa13.46□□□□□ -0.26
CXCL12-201ENST00000343575 TRABD2BA6NFA1 517 aa13.45□□□□□ -0.26
CXCL12-201ENST00000343575 OR6C70A6NIJ9 312 aa13.45□□□□□ -0.26
CXCL12-201ENST00000343575 EFCAB9A8MZ26 197 aa13.45□□□□□ -0.26
CXCL12-201ENST00000343575 ADAMDEC1O15204 470 aa13.45□□□□□ -0.26
CXCL12-201ENST00000343575 OIP5O43482 229 aa13.45□□□□□ -0.26
CXCL12-201ENST00000343575 FADS1O60427 444 aa13.45□□□□□ -0.26
CXCL12-201ENST00000343575 PPM1BO75688 479 aa13.45□□□□□ -0.26
CXCL12-201ENST00000343575 HPP00738 406 aa13.45□□□□□ -0.26
CXCL12-201ENST00000343575 APOA1P02647 267 aa13.45□□□□□ -0.26
CXCL12-201ENST00000343575 FPR1P21462 350 aa13.45□□□□□ -0.26
CXCL12-201ENST00000343575 ADH7P40394 386 aa13.45□□□□□ -0.26
CXCL12-201ENST00000343575 PSMD4P55036 377 aaKnown RBP13.45□□□□□ -0.26
CXCL12-201ENST00000343575 CDH12P55289 794 aa13.45□□□□□ -0.26
CXCL12-201ENST00000343575 RGS8P57771 180 aaPredicted RBP13.45□□□□□ -0.26
CXCL12-201ENST00000343575 FBXW4P57775 412 aa13.45□□□□□ -0.26
CXCL12-201ENST00000343575 SPIBQ01892 262 aa13.45□□□□□ -0.26
CXCL12-201ENST00000343575 PIGFQ07326 219 aa13.45□□□□□ -0.26
CXCL12-201ENST00000343575 EIPR1Q53HC9 387 aa13.45□□□□□ -0.26
CXCL12-201ENST00000343575 POGLUT1Q8NBL1 392 aa13.45□□□□□ -0.26
CXCL12-201ENST00000343575 FAM71CQ8NEG0 241 aa13.45□□□□□ -0.26
CXCL12-201ENST00000343575 HGDQ93099 445 aa13.45□□□□□ -0.26
CXCL12-201ENST00000343575 ZNF524Q96C55 264 aa13.45□□□□□ -0.26
CXCL12-201ENST00000343575 RASL10BQ96S79 203 aa13.45□□□□□ -0.26
CXCL12-201ENST00000343575 EPYCQ99645 322 aa13.45□□□□□ -0.26
CXCL12-201ENST00000343575 NXF2Q9GZY0 626 aaKnown RBP13.45□□□□□ -0.26
CXCL12-201ENST00000343575 TRIM45Q9H8W5 580 aaPredicted RBP13.45□□□□□ -0.26
CXCL12-201ENST00000343575 REEP1Q9H902 201 aa13.45□□□□□ -0.26
CXCL12-201ENST00000343575 ST6GALNAC1Q9NSC7 600 aaPredicted RBP13.45□□□□□ -0.26
CXCL12-201ENST00000343575 CCDC59Q9P031 241 aaKnown RBP13.45□□□□□ -0.26
CXCL12-201ENST00000343575 MRTO4Q9UKD2 239 aaKnown RBP13.45□□□□□ -0.26
CXCL12-201ENST00000343575 POU2F3Q9UKI9 436 aa13.45□□□□□ -0.26
CXCL12-201ENST00000343575 KLK13Q9UKR3 277 aa13.45□□□□□ -0.26
CXCL12-201ENST00000343575 MED13Q9UHV7 2174 aa13.45□□□□□ -0.26
CXCL12-201ENST00000343575 PCNX3Q9H6A9 2034 aa13.44□□□□□ -0.26
CXCL12-201ENST00000343575 TRBV4-1A0A0J9YWV2 114 aa13.44□□□□□ -0.26
CXCL12-201ENST00000343575 TNFRSF11BO00300 401 aa13.44□□□□□ -0.26
CXCL12-201ENST00000343575 NTN1O95631 604 aa13.44□□□□□ -0.26
CXCL12-201ENST00000343575 NGFRP08138 427 aa13.44□□□□□ -0.26
CXCL12-201ENST00000343575 LIFP15018 202 aa13.44□□□□□ -0.26
CXCL12-201ENST00000343575 IL12BP29460 328 aa13.44□□□□□ -0.26
CXCL12-201ENST00000343575 LCN1P31025 176 aa13.44□□□□□ -0.26
CXCL12-201ENST00000343575 S100A5P33763 92 aa13.44□□□□□ -0.26
CXCL12-201ENST00000343575 LSM11P83369 360 aaKnown RBP eCLIP13.44□□□□□ -0.26
CXCL12-201ENST00000343575 RAPSNQ13702 412 aa13.44□□□□□ -0.26
CXCL12-201ENST00000343575 EXOC3L2Q2M3D2 409 aa13.44□□□□□ -0.26
CXCL12-201ENST00000343575 ENTPD8Q5MY95 495 aa13.44□□□□□ -0.26
CXCL12-201ENST00000343575 FCRLBQ6BAA4 426 aa13.44□□□□□ -0.26
CXCL12-201ENST00000343575 SLC7A5P1Q8MH63 180 aa13.44□□□□□ -0.26
CXCL12-201ENST00000343575 POC5Q8NA72 575 aa13.44□□□□□ -0.26
CXCL12-201ENST00000343575 GATSQ8NAP1 163 aa13.44□□□□□ -0.26
CXCL12-201ENST00000343575 KBTBD8Q8NFY9 601 aa13.44□□□□□ -0.26
CXCL12-201ENST00000343575 RNF138Q8WVD3 245 aa13.44□□□□□ -0.26
CXCL12-201ENST00000343575 PSMF1Q92530 271 aa13.44□□□□□ -0.26
CXCL12-201ENST00000343575 PRRC1Q96M27 445 aa13.44□□□□□ -0.26
CXCL12-201ENST00000343575 SNX18Q96RF0 628 aa13.44□□□□□ -0.26
CXCL12-201ENST00000343575 DCSTAMPQ9H295 470 aa13.44□□□□□ -0.26
CXCL12-201ENST00000343575 KLHL28Q9NXS3 571 aa13.44□□□□□ -0.26
CXCL12-201ENST00000343575 AKAP13Q12802 2813 aa13.44□□□□□ -0.26
CXCL12-201ENST00000343575 METTL15A6NJ78 407 aa13.44□□□□□ -0.26
CXCL12-201ENST00000343575 B4DXG7 233 aa13.44□□□□□ -0.26
CXCL12-201ENST00000343575 ALG1L2C9J202 215 aa13.44□□□□□ -0.26
CXCL12-201ENST00000343575 XPNPEP2O43895 674 aa13.44□□□□□ -0.26
CXCL12-201ENST00000343575 KRT8P05787 483 aa13.44□□□□□ -0.26
CXCL12-201ENST00000343575 LIPCP11150 499 aa13.44□□□□□ -0.26
CXCL12-201ENST00000343575 WT1P19544 449 aaPredicted RBP13.44□□□□□ -0.26
CXCL12-201ENST00000343575 CLK1P49759 484 aaKnown RBP13.44□□□□□ -0.26
CXCL12-201ENST00000343575 NRG3P56975 720 aa13.44□□□□□ -0.26
CXCL12-201ENST00000343575 PSPHP78330 225 aa13.44□□□□□ -0.26
CXCL12-201ENST00000343575 FOXD4Q12950 439 aaPredicted RBP13.44□□□□□ -0.26
CXCL12-201ENST00000343575 SEC23BQ15437 767 aa13.44□□□□□ -0.26
CXCL12-201ENST00000343575 TMEM236Q5W0B7 351 aa13.44□□□□□ -0.26
CXCL12-201ENST00000343575 CBLN3Q6UW01 205 aa13.44□□□□□ -0.26
CXCL12-201ENST00000343575 MARCH3Q86UD3 253 aa13.44□□□□□ -0.26
CXCL12-201ENST00000343575 VASH2Q86V25 355 aa13.44□□□□□ -0.26
CXCL12-201ENST00000343575 CYP4Z1Q86W10 505 aa13.44□□□□□ -0.26
CXCL12-201ENST00000343575 CMIPQ8IY22 773 aa13.44□□□□□ -0.26
CXCL12-201ENST00000343575 ZNF540Q8NDQ6 660 aa13.44□□□□□ -0.26
CXCL12-201ENST00000343575 LILRB4Q8NHJ6 448 aa13.44□□□□□ -0.26
CXCL12-201ENST00000343575 SLC7A13Q8TCU3 470 aa13.44□□□□□ -0.26
CXCL12-201ENST00000343575 GRHL3Q8TE85 626 aa13.44□□□□□ -0.26
CXCL12-201ENST00000343575 OIT3Q8WWZ8 545 aa13.44□□□□□ -0.26
CXCL12-201ENST00000343575 MCHR1Q99705 422 aa13.44□□□□□ -0.26
CXCL12-201ENST00000343575 SLC13A4Q9UKG4 626 aa13.44□□□□□ -0.26
CXCL12-201ENST00000343575 GMPPBQ9Y5P6 360 aa13.44□□□□□ -0.26
CXCL12-201ENST00000343575 PEX16Q9Y5Y5 336 aa13.44□□□□□ -0.26
CXCL12-201ENST00000343575 A0A1W2PRQ8 180 aa13.43□□□□□ -0.26
CXCL12-201ENST00000343575 CPSF4LA6NMK7 179 aaKnown RBP13.43□□□□□ -0.26
CXCL12-201ENST00000343575 FAM20BO75063 409 aa13.43□□□□□ -0.26
CXCL12-201ENST00000343575 ITGA10O75578 1167 aa13.43□□□□□ -0.26
CXCL12-201ENST00000343575 GADD45GO95257 159 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms