RNA–Protein interactions for RNA: ENST00000343483.6

HOXA9-201, Transcript of homeobox A9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA9, Length 2,060 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9-201ENST00000343483 ENKD1Q9H0I2 346 aa17.09■□□□□ 0.33
HOXA9-201ENST00000343483 MED17Q9NVC6 651 aa17.09■□□□□ 0.33
HOXA9-201ENST00000343483 CRNNQ9UBG3 495 aaPredicted RBP17.09■□□□□ 0.33
HOXA9-201ENST00000343483 TRAV27A0A087WT01 109 aa17.08■□□□□ 0.33
HOXA9-201ENST00000343483 FRG2CA6NGY1 282 aa17.08■□□□□ 0.33
HOXA9-201ENST00000343483 PATE3B3GLJ2 98 aa17.08■□□□□ 0.33
HOXA9-201ENST00000343483 NGFRP08138 427 aa17.08■□□□□ 0.33
HOXA9-201ENST00000343483 TBXA2RP21731 343 aa17.08■□□□□ 0.33
HOXA9-201ENST00000343483 CTBP2P56545 445 aa17.08■□□□□ 0.33
HOXA9-201ENST00000343483 WNT4P56705 351 aa17.08■□□□□ 0.33
HOXA9-201ENST00000343483 ACY1Q03154 408 aa17.08■□□□□ 0.33
HOXA9-201ENST00000343483 SPANXN2Q5MJ10 180 aa17.08■□□□□ 0.33
HOXA9-201ENST00000343483 STEAP3Q658P3 488 aa17.08■□□□□ 0.33
HOXA9-201ENST00000343483 FAAH2Q6GMR7 532 aa17.08■□□□□ 0.33
HOXA9-201ENST00000343483 SHFQ7M4L6 423 aa17.08■□□□□ 0.33
HOXA9-201ENST00000343483 FAM83FQ8NEG4 500 aaPredicted RBP17.08■□□□□ 0.33
HOXA9-201ENST00000343483 OR51A7Q8NH64 312 aa17.08■□□□□ 0.33
HOXA9-201ENST00000343483 DAZLQ92904 295 aaKnown RBP17.08■□□□□ 0.33
HOXA9-201ENST00000343483 RFKQ969G6 155 aa17.08■□□□□ 0.33
HOXA9-201ENST00000343483 NRSN2Q9GZP1 204 aa17.08■□□□□ 0.33
HOXA9-201ENST00000343483 UBQLN4Q9NRR5 601 aa17.08■□□□□ 0.33
HOXA9-201ENST00000343483 ZNF229Q9UJW7 825 aa17.08■□□□□ 0.33
HOXA9-201ENST00000343483 SLC35A3Q9Y2D2 325 aa17.08■□□□□ 0.33
HOXA9-201ENST00000343483 UGT2A1Q9Y4X1 527 aa17.08■□□□□ 0.33
HOXA9-201ENST00000343483 SPIN1Q9Y657 262 aaPredicted RBP17.08■□□□□ 0.33
HOXA9-201ENST00000343483 R4GN57 208 aa17.08■□□□□ 0.33
HOXA9-201ENST00000343483 A0A075B6Q4 140 aa17.08■□□□□ 0.32
HOXA9-201ENST00000343483 IGHV5-10-1A0A0J9YXX1 117 aa17.08■□□□□ 0.32
HOXA9-201ENST00000343483 PNMA8CA0A1B0GUJ8 204 aa17.08■□□□□ 0.32
HOXA9-201ENST00000343483 C2orf92A0A1B0GVN3 265 aa17.08■□□□□ 0.32
HOXA9-201ENST00000343483 CDC14CA4D256 554 aa17.08■□□□□ 0.32
HOXA9-201ENST00000343483 EFCAB7A8K855 629 aa17.08■□□□□ 0.32
HOXA9-201ENST00000343483 ZNF670-ZNF695F2Z2N8 137 aa17.08■□□□□ 0.32
HOXA9-201ENST00000343483 CTDSP2O14595 271 aa17.08■□□□□ 0.32
HOXA9-201ENST00000343483 RCBTB2O95199 551 aa17.08■□□□□ 0.32
HOXA9-201ENST00000343483 IL33O95760 270 aa17.08■□□□□ 0.32
HOXA9-201ENST00000343483 TSPAN19P0C672 248 aa17.08■□□□□ 0.32
HOXA9-201ENST00000343483 CPEP16870 476 aa17.08■□□□□ 0.32
HOXA9-201ENST00000343483 GTF2E2P29084 291 aaKnown RBP17.08■□□□□ 0.32
HOXA9-201ENST00000343483 RBM34P42696 430 aaKnown RBP17.08■□□□□ 0.32
HOXA9-201ENST00000343483 COPZ1P61923 177 aa17.08■□□□□ 0.32
HOXA9-201ENST00000343483 SLC35F1Q5T1Q4 408 aa17.08■□□□□ 0.32
HOXA9-201ENST00000343483 OR2G6Q5TZ20 316 aa17.08■□□□□ 0.32
HOXA9-201ENST00000343483 RHBDD2Q6NTF9 364 aa17.08■□□□□ 0.32
HOXA9-201ENST00000343483 PRR23CQ6ZRP0 262 aa17.08■□□□□ 0.32
HOXA9-201ENST00000343483 BBS1Q8NFJ9 593 aa17.08■□□□□ 0.32
HOXA9-201ENST00000343483 OR4D9Q8NGE8 314 aa17.08■□□□□ 0.32
HOXA9-201ENST00000343483 OR14A16Q8NHC5 309 aa17.08■□□□□ 0.32
HOXA9-201ENST00000343483 CEP19Q96LK0 163 aa17.08■□□□□ 0.32
HOXA9-201ENST00000343483 ZNF426Q9BUY5 554 aa17.08■□□□□ 0.32
HOXA9-201ENST00000343483 IFT27Q9BW83 186 aa17.08■□□□□ 0.32
HOXA9-201ENST00000343483 COPS7AQ9UBW8 275 aa17.08■□□□□ 0.32
HOXA9-201ENST00000343483 SIGLEC7Q9Y286 467 aa17.08■□□□□ 0.32
HOXA9-201ENST00000343483 TMEM129A0AVI4 362 aa17.07■□□□□ 0.32
HOXA9-201ENST00000343483 FAM183AA6NL82 134 aa17.07■□□□□ 0.32
HOXA9-201ENST00000343483 SCDO00767 359 aa17.07■□□□□ 0.32
HOXA9-201ENST00000343483 UTS2O95399 124 aa17.07■□□□□ 0.32
HOXA9-201ENST00000343483 ANKRD34CP0C6C1 535 aa17.07■□□□□ 0.32
HOXA9-201ENST00000343483 ETV6P41212 452 aa17.07■□□□□ 0.32
HOXA9-201ENST00000343483 CRYZQ08257 329 aaKnown RBP17.07■□□□□ 0.32
HOXA9-201ENST00000343483 SQSTM1Q13501 440 aa17.07■□□□□ 0.32
HOXA9-201ENST00000343483 CD226Q15762 336 aa17.07■□□□□ 0.32
HOXA9-201ENST00000343483 AADACL4Q5VUY2 407 aa17.07■□□□□ 0.32
HOXA9-201ENST00000343483 HLA-DQA1Q5Y7H0 255 aa17.07■□□□□ 0.32
HOXA9-201ENST00000343483 RPL13AP3Q6NVV1 102 aa17.07■□□□□ 0.32
HOXA9-201ENST00000343483 THSD4Q6ZMP0 1018 aa17.07■□□□□ 0.32
HOXA9-201ENST00000343483 LANCL3Q6ZV70 420 aa17.07■□□□□ 0.32
HOXA9-201ENST00000343483 OAFQ86UD1 273 aa17.07■□□□□ 0.32
HOXA9-201ENST00000343483 CCDC190Q86UF4 302 aa17.07■□□□□ 0.32
HOXA9-201ENST00000343483 C9orf40Q8IXQ3 194 aa17.07■□□□□ 0.32
HOXA9-201ENST00000343483 FAM181AQ8N9Y4 354 aa17.07■□□□□ 0.32
HOXA9-201ENST00000343483 ADIPOR1Q96A54 375 aa17.07■□□□□ 0.32
HOXA9-201ENST00000343483 ADOQ96SZ5 270 aa17.07■□□□□ 0.32
HOXA9-201ENST00000343483 HOXD1Q9GZZ0 328 aa17.07■□□□□ 0.32
HOXA9-201ENST00000343483 LRRN3Q9H3W5 708 aa17.07■□□□□ 0.32
HOXA9-201ENST00000343483 SMURF1Q9HCE7 757 aa17.07■□□□□ 0.32
HOXA9-201ENST00000343483 SLC22A11Q9NSA0 550 aa17.07■□□□□ 0.32
HOXA9-201ENST00000343483 SNTG1Q9NSN8 517 aa17.07■□□□□ 0.32
HOXA9-201ENST00000343483 EXOSC1Q9Y3B2 195 aaKnown RBP17.07■□□□□ 0.32
HOXA9-201ENST00000343483 BHLHE40O14503 412 aa17.06■□□□□ 0.32
HOXA9-201ENST00000343483 TIAF1O95411 115 aa17.06■□□□□ 0.32
HOXA9-201ENST00000343483 RORCP51449 518 aa17.06■□□□□ 0.32
HOXA9-201ENST00000343483 CCR4P51679 360 aa17.06■□□□□ 0.32
HOXA9-201ENST00000343483 EBPQ15125 230 aaKnown RBP17.06■□□□□ 0.32
HOXA9-201ENST00000343483 COX15Q7KZN9 410 aa17.06■□□□□ 0.32
HOXA9-201ENST00000343483 CPOQ8IVL8 374 aa17.06■□□□□ 0.32
HOXA9-201ENST00000343483 SLITRK4Q8IW52 837 aa17.06■□□□□ 0.32
HOXA9-201ENST00000343483 POC5Q8NA72 575 aa17.06■□□□□ 0.32
HOXA9-201ENST00000343483 SLC38A9Q8NBW4 561 aa17.06■□□□□ 0.32
HOXA9-201ENST00000343483 PHOSPHO1Q8TCT1 267 aa17.06■□□□□ 0.32
HOXA9-201ENST00000343483 GATAD2BQ8WXI9 593 aa17.06■□□□□ 0.32
HOXA9-201ENST00000343483 ART5Q96L15 291 aa17.06■□□□□ 0.32
HOXA9-201ENST00000343483 CCDC74BQ96LY2 380 aa17.06■□□□□ 0.32
HOXA9-201ENST00000343483 BARHL1Q9BZE3 327 aa17.06■□□□□ 0.32
HOXA9-201ENST00000343483 HINT3Q9NQE9 182 aaKnown RBP17.06■□□□□ 0.32
HOXA9-201ENST00000343483 H2AFY2Q9P0M6 372 aaPredicted RBP17.06■□□□□ 0.32
HOXA9-201ENST00000343483 MRTO4Q9UKD2 239 aaKnown RBP17.06■□□□□ 0.32
HOXA9-201ENST00000343483 PCDHGB6Q9Y5F9 930 aa17.06■□□□□ 0.32
HOXA9-201ENST00000343483 CFAP54Q96N23 3096 aa17.06■□□□□ 0.32
HOXA9-201ENST00000343483 YKT6O15498 198 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms