RNA–Protein interactions for RNA: ENST00000341594.9

SYNE1-201, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SYNE1, Length 26,584 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-201ENST00000341594 FLRT2O43155 660 aa3.32□□□□□ -1.88
SYNE1-201ENST00000341594 SELENBP1Q13228 472 aa3.32□□□□□ -1.88
SYNE1-201ENST00000341594 SCGB2B2Q4G0G5 96 aa3.32□□□□□ -1.88
SYNE1-201ENST00000341594 RSPRY1Q96DX4 576 aa3.32□□□□□ -1.88
SYNE1-201ENST00000341594 NMUR1Q9HB89 426 aa3.32□□□□□ -1.88
SYNE1-201ENST00000341594 CRLF2Q9HC73 371 aa3.32□□□□□ -1.88
SYNE1-201ENST00000341594 FBXL4Q9UKA2 621 aa3.32□□□□□ -1.88
SYNE1-201ENST00000341594 LOC100130705A0A1B0GUX0 176 aa3.32□□□□□ -1.88
SYNE1-201ENST00000341594 EBLN1P0CF75 366 aa3.32□□□□□ -1.88
SYNE1-201ENST00000341594 GKN3PP0CG01 181 aa3.32□□□□□ -1.88
SYNE1-201ENST00000341594 SLC17A1Q14916 467 aa3.32□□□□□ -1.88
SYNE1-201ENST00000341594 C22orf42Q6IC83 251 aa3.32□□□□□ -1.88
SYNE1-201ENST00000341594 FAM151BQ6UXP7 276 aa3.32□□□□□ -1.88
SYNE1-201ENST00000341594 OR2L3Q8NG85 312 aa3.32□□□□□ -1.88
SYNE1-201ENST00000341594 ST6GALNAC5Q9BVH7 336 aa3.32□□□□□ -1.88
SYNE1-201ENST00000341594 XYLT2Q9H1B5 865 aa3.32□□□□□ -1.88
SYNE1-201ENST00000341594 THSD7AQ9UPZ6 1657 aa3.32□□□□□ -1.88
SYNE1-201ENST00000341594 WASH3PC4AMC7 463 aa3.32□□□□□ -1.88
SYNE1-201ENST00000341594 ZNF208O43345 1280 aa3.32□□□□□ -1.88
SYNE1-201ENST00000341594 SDC3O75056 442 aa3.32□□□□□ -1.88
SYNE1-201ENST00000341594 MT-ND4P03905 459 aa3.32□□□□□ -1.88
SYNE1-201ENST00000341594 CSTBP04080 98 aaKnown RBP3.32□□□□□ -1.88
SYNE1-201ENST00000341594 DIO3P55073 304 aa3.32□□□□□ -1.88
SYNE1-201ENST00000341594 SLC35A2P78381 396 aa3.32□□□□□ -1.88
SYNE1-201ENST00000341594 IRF8Q02556 426 aa3.32□□□□□ -1.88
SYNE1-201ENST00000341594 DECR1Q16698 335 aa3.32□□□□□ -1.88
SYNE1-201ENST00000341594 EIPR1Q53HC9 387 aa3.32□□□□□ -1.88
SYNE1-201ENST00000341594 OR4F3Q6IEY1 312 aa3.32□□□□□ -1.88
SYNE1-201ENST00000341594 NXF5Q9H1B4 397 aaKnown RBP3.32□□□□□ -1.88
SYNE1-201ENST00000341594 OR12D3Q9UGF7 316 aa3.32□□□□□ -1.88
SYNE1-201ENST00000341594 SNED1Q8TER0 1413 aa3.32□□□□□ -1.88
SYNE1-201ENST00000341594 NFKBIEO00221 500 aa3.32□□□□□ -1.88
SYNE1-201ENST00000341594 GIPP09681 153 aaPredicted RBP3.32□□□□□ -1.88
SYNE1-201ENST00000341594 HPGDP15428 266 aa3.32□□□□□ -1.88
SYNE1-201ENST00000341594 PCGF2P35227 344 aa3.32□□□□□ -1.88
SYNE1-201ENST00000341594 ZXDAP98168 799 aa3.32□□□□□ -1.88
SYNE1-201ENST00000341594 RAB31Q13636 194 aa3.32□□□□□ -1.88
SYNE1-201ENST00000341594 PLBD1Q6P4A8 553 aa3.32□□□□□ -1.88
SYNE1-201ENST00000341594 WDR88Q6ZMY6 472 aa3.32□□□□□ -1.88
SYNE1-201ENST00000341594 ZNF704Q6ZNC4 412 aaPredicted RBP3.32□□□□□ -1.88
SYNE1-201ENST00000341594 GPR135Q8IZ08 494 aa3.32□□□□□ -1.88
SYNE1-201ENST00000341594 OSTF1Q92882 214 aa3.32□□□□□ -1.88
SYNE1-201ENST00000341594 GPR88Q9GZN0 384 aa3.32□□□□□ -1.88
SYNE1-201ENST00000341594 ETV7Q9Y603 341 aa3.32□□□□□ -1.88
SYNE1-201ENST00000341594 PLEKHS1Q5SXH7 462 aa3.32□□□□□ -1.88
SYNE1-201ENST00000341594 SLIRPQ9GZT3 109 aaKnown RBP3.32□□□□□ -1.88
SYNE1-201ENST00000341594 KCNK15Q9H427 330 aa3.32□□□□□ -1.88
SYNE1-201ENST00000341594 DUS2Q9NX74 493 aaKnown RBP3.32□□□□□ -1.88
SYNE1-201ENST00000341594 SLC25A13Q9UJS0 675 aa3.32□□□□□ -1.88
SYNE1-201ENST00000341594 KCPQ6ZWJ8 1503 aa3.32□□□□□ -1.88
SYNE1-201ENST00000341594 BCKDKO14874 412 aa3.32□□□□□ -1.88
SYNE1-201ENST00000341594 CRHP06850 196 aa3.32□□□□□ -1.88
SYNE1-201ENST00000341594 DPP4P27487 766 aa3.32□□□□□ -1.88
SYNE1-201ENST00000341594 PPM1AP35813 382 aa3.32□□□□□ -1.88
SYNE1-201ENST00000341594 IRF3Q14653 427 aa3.32□□□□□ -1.88
SYNE1-201ENST00000341594 GRHL3Q8TE85 626 aa3.32□□□□□ -1.88
SYNE1-201ENST00000341594 BRI3BPQ8WY22 251 aa3.32□□□□□ -1.88
SYNE1-201ENST00000341594 TM6SF2Q9BZW4 377 aa3.32□□□□□ -1.88
SYNE1-201ENST00000341594 NSUN3Q9H649 340 aaKnown RBP3.32□□□□□ -1.88
SYNE1-201ENST00000341594 CALHM2Q9HA72 323 aa3.32□□□□□ -1.88
SYNE1-201ENST00000341594 NLGN3Q9NZ94 848 aa3.32□□□□□ -1.88
SYNE1-201ENST00000341594 NCKAP1Q9Y2A7 1128 aa3.32□□□□□ -1.88
SYNE1-201ENST00000341594 WDR90Q96KV7 1748 aa3.32□□□□□ -1.88
SYNE1-201ENST00000341594 TRDV1A0A1B0GX56 115 aa3.32□□□□□ -1.88
SYNE1-201ENST00000341594 UBFD1O14562 309 aaKnown RBP3.32□□□□□ -1.88
SYNE1-201ENST00000341594 TNFSF10P50591 281 aa3.32□□□□□ -1.88
SYNE1-201ENST00000341594 FOXA1P55317 472 aa3.32□□□□□ -1.88
SYNE1-201ENST00000341594 ARF6P62330 175 aa3.32□□□□□ -1.88
SYNE1-201ENST00000341594 ASPHD1Q5U4P2 390 aa3.32□□□□□ -1.88
SYNE1-201ENST00000341594 WFDC8Q8IUA0 241 aa3.32□□□□□ -1.88
SYNE1-201ENST00000341594 FAM98AQ8NCA5 519 aaKnown RBP3.32□□□□□ -1.88
SYNE1-201ENST00000341594 RAET1EQ8TD07 263 aa3.32□□□□□ -1.88
SYNE1-201ENST00000341594 MITD1Q8WV92 249 aa3.32□□□□□ -1.88
SYNE1-201ENST00000341594 PYURFQ96I23 114 aa3.32□□□□□ -1.88
SYNE1-201ENST00000341594 SPNS1Q9H2V7 528 aa3.32□□□□□ -1.88
SYNE1-201ENST00000341594 NUDT15Q9NV35 164 aa3.32□□□□□ -1.88
SYNE1-201ENST00000341594 MEMO1Q9Y316 297 aa3.32□□□□□ -1.88
SYNE1-201ENST00000341594 GOLT1BQ9Y3E0 138 aa3.32□□□□□ -1.88
SYNE1-201ENST00000341594 MEIOCA2RUB1 952 aa3.32□□□□□ -1.88
SYNE1-201ENST00000341594 OR2F2O95006 317 aa3.32□□□□□ -1.88
SYNE1-201ENST00000341594 ACVRL1P37023 503 aa3.32□□□□□ -1.88
SYNE1-201ENST00000341594 OR2F1Q13607 317 aa3.32□□□□□ -1.88
SYNE1-201ENST00000341594 TESK1Q15569 626 aa3.32□□□□□ -1.88
SYNE1-201ENST00000341594 HLA-BQ31612 363 aa3.32□□□□□ -1.88
SYNE1-201ENST00000341594 FAM126BQ8IXS8 530 aa3.32□□□□□ -1.88
SYNE1-201ENST00000341594 ZCCHC10Q8TBK6 192 aa3.32□□□□□ -1.88
SYNE1-201ENST00000341594 SORCS1Q8WY21 1168 aa3.32□□□□□ -1.88
SYNE1-201ENST00000341594 FYTTD1Q96QD9 318 aaKnown RBP3.32□□□□□ -1.88
SYNE1-201ENST00000341594 ZNF607Q96SK3 696 aa3.32□□□□□ -1.88
SYNE1-201ENST00000341594 CISHQ9NSE2 258 aa3.32□□□□□ -1.88
SYNE1-201ENST00000341594 TBC1D3DA0A087WVF3 549 aa3.32□□□□□ -1.88
SYNE1-201ENST00000341594 TBC1D3IA0A087WXS9 549 aa3.32□□□□□ -1.88
SYNE1-201ENST00000341594 TBC1D3EA0A087X179 549 aa3.32□□□□□ -1.88
SYNE1-201ENST00000341594 TBC1D3KA0A087X1G2 549 aa3.32□□□□□ -1.88
SYNE1-201ENST00000341594 TRAV34A0A0B4J273 112 aa3.32□□□□□ -1.88
SYNE1-201ENST00000341594 TBC1D3BA6NDS4 549 aa3.32□□□□□ -1.88
SYNE1-201ENST00000341594 TBC1D3FA6NER0 549 aaPredicted RBP3.32□□□□□ -1.88
SYNE1-201ENST00000341594 TBC1D3LB9A6J9 549 aa3.32□□□□□ -1.88
SYNE1-201ENST00000341594 SLC1A7O00341 560 aa3.32□□□□□ -1.88
SYNE1-201ENST00000341594 NUDT21O43809 227 aaKnown RBP3.32□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms