RNA–Protein interactions for RNA: ENST00000341060.3

TDP2-201, Transcript of tyrosyl-DNA phosphodiesterase 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TDP2, Length 2,120 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP2-201ENST00000341060 ORC5O43913 435 aa13.42□□□□□ -0.26
TDP2-201ENST00000341060 EIF4EP06730 217 aaKnown RBP13.42□□□□□ -0.26
TDP2-201ENST00000341060 SLC6A6P31641 620 aa13.42□□□□□ -0.26
TDP2-201ENST00000341060 AKT2P31751 481 aa13.42□□□□□ -0.26
TDP2-201ENST00000341060 OR12D2P58182 307 aa13.42□□□□□ -0.26
TDP2-201ENST00000341060 VSX2P58304 361 aaPredicted RBP13.42□□□□□ -0.26
TDP2-201ENST00000341060 ALG10BQ5I7T1 473 aa13.42□□□□□ -0.26
TDP2-201ENST00000341060 TMEM31Q5JXX7 168 aa13.42□□□□□ -0.26
TDP2-201ENST00000341060 ZNF57Q68EA5 555 aaPredicted RBP13.42□□□□□ -0.26
TDP2-201ENST00000341060 DMKNQ6E0U4 476 aaPredicted RBP13.42□□□□□ -0.26
TDP2-201ENST00000341060 FAAH2Q6GMR7 532 aa13.42□□□□□ -0.26
TDP2-201ENST00000341060 Q6ZSR6 202 aa13.42□□□□□ -0.26
TDP2-201ENST00000341060 SLC44A3Q8N4M1 653 aa13.42□□□□□ -0.26
TDP2-201ENST00000341060 ZNF614Q8N883 585 aa13.42□□□□□ -0.26
TDP2-201ENST00000341060 ABHD4Q8TB40 342 aa13.42□□□□□ -0.26
TDP2-201ENST00000341060 GPBAR1Q8TDU6 330 aa13.42□□□□□ -0.26
TDP2-201ENST00000341060 CREB3L1Q96BA8 519 aa13.42□□□□□ -0.26
TDP2-201ENST00000341060 PTCHD1Q96NR3 888 aa13.42□□□□□ -0.26
TDP2-201ENST00000341060 LMF2Q9BU23 707 aaKnown RBP13.42□□□□□ -0.26
TDP2-201ENST00000341060 MCCC2Q9HCC0 563 aa13.42□□□□□ -0.26
TDP2-201ENST00000341060 CLEC1BQ9P126 229 aa13.42□□□□□ -0.26
TDP2-201ENST00000341060 RASD1Q9Y272 281 aa13.42□□□□□ -0.26
TDP2-201ENST00000341060 BOLA1Q9Y3E2 137 aa13.42□□□□□ -0.26
TDP2-201ENST00000341060 A0A0G2JK05 382 aa13.42□□□□□ -0.26
TDP2-201ENST00000341060 J3QLW9 94 aa13.42□□□□□ -0.26
TDP2-201ENST00000341060 RDH16O75452 317 aa13.42□□□□□ -0.26
TDP2-201ENST00000341060 ZNF19P17023 458 aa13.42□□□□□ -0.26
TDP2-201ENST00000341060 NPR2P20594 1047 aa13.42□□□□□ -0.26
TDP2-201ENST00000341060 EMDP50402 254 aa13.42□□□□□ -0.26
TDP2-201ENST00000341060 RACK1P63244 317 aaKnown RBP13.42□□□□□ -0.26
TDP2-201ENST00000341060 SLC3A1Q07837 685 aa13.42□□□□□ -0.26
TDP2-201ENST00000341060 CEACAM19Q7Z692 300 aa13.42□□□□□ -0.26
TDP2-201ENST00000341060 LIX1LQ8IVB5 337 aa13.42□□□□□ -0.26
TDP2-201ENST00000341060 SAMD12Q8N8I0 201 aa13.42□□□□□ -0.26
TDP2-201ENST00000341060 OR4M1Q8NGD0 313 aa13.42□□□□□ -0.26
TDP2-201ENST00000341060 TRIM63Q969Q1 353 aa13.42□□□□□ -0.26
TDP2-201ENST00000341060 LRFN5Q96NI6 719 aa13.42□□□□□ -0.26
TDP2-201ENST00000341060 TNFRSF13CQ96RJ3 184 aa13.42□□□□□ -0.26
TDP2-201ENST00000341060 CCDC3Q9BQI4 270 aa13.42□□□□□ -0.26
TDP2-201ENST00000341060 WACQ9BTA9 647 aa13.42□□□□□ -0.26
TDP2-201ENST00000341060 TRIM2Q9C040 744 aa13.42□□□□□ -0.26
TDP2-201ENST00000341060 TTYH1Q9H313 450 aaPredicted RBP13.42□□□□□ -0.26
TDP2-201ENST00000341060 SLA2Q9H6Q3 261 aa13.42□□□□□ -0.26
TDP2-201ENST00000341060 CAPN10Q9HC96 672 aa13.42□□□□□ -0.26
TDP2-201ENST00000341060 STARD5Q9NSY2 213 aa13.42□□□□□ -0.26
TDP2-201ENST00000341060 SYNDIG1LA6NDD5 238 aa13.41□□□□□ -0.26
TDP2-201ENST00000341060 A6NL46 340 aa13.41□□□□□ -0.26
TDP2-201ENST00000341060 HCRTR1O43613 425 aa13.41□□□□□ -0.26
TDP2-201ENST00000341060 OR10H2O60403 315 aa13.41□□□□□ -0.26
TDP2-201ENST00000341060 IFNGP01579 166 aa13.41□□□□□ -0.26
TDP2-201ENST00000341060 GYPBP06028 91 aa13.41□□□□□ -0.26
TDP2-201ENST00000341060 SPTBP11277 2137 aa13.41□□□□□ -0.26
TDP2-201ENST00000341060 ARSBP15848 533 aa13.41□□□□□ -0.26
TDP2-201ENST00000341060 S1PR1P21453 382 aa13.41□□□□□ -0.26
TDP2-201ENST00000341060 SLC6A1P30531 599 aa13.41□□□□□ -0.26
TDP2-201ENST00000341060 PITPNBP48739 271 aa13.41□□□□□ -0.26
TDP2-201ENST00000341060 ATP12AP54707 1039 aa13.41□□□□□ -0.26
TDP2-201ENST00000341060 OR10A3P58181 314 aa13.41□□□□□ -0.26
TDP2-201ENST00000341060 PPP1CAP62136 330 aa13.41□□□□□ -0.26
TDP2-201ENST00000341060 TFF2Q03403 129 aa13.41□□□□□ -0.26
TDP2-201ENST00000341060 C6orf183Q5T699 404 aa13.41□□□□□ -0.26
TDP2-201ENST00000341060 ZC3H14Q6PJT7 736 aaKnown RBP13.41□□□□□ -0.26
TDP2-201ENST00000341060 IL20RBQ6UXL0 311 aa13.41□□□□□ -0.26
TDP2-201ENST00000341060 RPTNQ6XPR3 784 aa13.41□□□□□ -0.26
TDP2-201ENST00000341060 LINC00114Q6XXX2 140 aa13.41□□□□□ -0.26
TDP2-201ENST00000341060 ZNF438Q7Z4V0 828 aa13.41□□□□□ -0.26
TDP2-201ENST00000341060 SFTPA2Q8IWL1 248 aa13.41□□□□□ -0.26
TDP2-201ENST00000341060 SLC22A18ASQ8N1D0 253 aa13.41□□□□□ -0.26
TDP2-201ENST00000341060 MS4A15Q8N5U1 240 aa13.41□□□□□ -0.26
TDP2-201ENST00000341060 YIPF7Q8N8F6 280 aa13.41□□□□□ -0.26
TDP2-201ENST00000341060 TEX19Q8NA77 164 aa13.41□□□□□ -0.26
TDP2-201ENST00000341060 SLC37A2Q8TED4 501 aa13.41□□□□□ -0.26
TDP2-201ENST00000341060 PEX11GQ96HA9 241 aa13.41□□□□□ -0.26
TDP2-201ENST00000341060 FOLH1BQ9HBA9 442 aa13.41□□□□□ -0.26
TDP2-201ENST00000341060 SERTAD3Q9UJW9 196 aa13.41□□□□□ -0.26
TDP2-201ENST00000341060 TRIOO75962 3097 aa13.4□□□□□ -0.26
TDP2-201ENST00000341060 KIR2DS5A0A0G2JLQ3 304 aa13.4□□□□□ -0.26
TDP2-201ENST00000341060 A0A0G2JNG1 304 aa13.4□□□□□ -0.26
TDP2-201ENST00000341060 CENPBD1B2RD01 187 aa13.4□□□□□ -0.26
TDP2-201ENST00000341060 KIR2DS3K7RE56 304 aa13.4□□□□□ -0.26
TDP2-201ENST00000341060 IGFBP4P22692 258 aa13.4□□□□□ -0.26
TDP2-201ENST00000341060 ERP29P30040 261 aaKnown RBP13.4□□□□□ -0.26
TDP2-201ENST00000341060 PYCR1P32322 319 aa13.4□□□□□ -0.26
TDP2-201ENST00000341060 ACVR1BP36896 505 aa13.4□□□□□ -0.26
TDP2-201ENST00000341060 NRG3P56975 720 aa13.4□□□□□ -0.26
TDP2-201ENST00000341060 GAS6Q14393 721 aa13.4□□□□□ -0.26
TDP2-201ENST00000341060 KIR2DS5Q14953 304 aa13.4□□□□□ -0.26
TDP2-201ENST00000341060 ZNHIT3Q15649 155 aaPredicted RBP13.4□□□□□ -0.26
TDP2-201ENST00000341060 YIF1BQ5BJH7 314 aa13.4□□□□□ -0.26
TDP2-201ENST00000341060 TMEM92Q6UXU6 159 aa13.4□□□□□ -0.26
TDP2-201ENST00000341060 SSX6Q7RTT6 188 aa13.4□□□□□ -0.26
TDP2-201ENST00000341060 OR13H1Q8NG92 308 aa13.4□□□□□ -0.26
TDP2-201ENST00000341060 OR5J2Q8NH18 312 aa13.4□□□□□ -0.26
TDP2-201ENST00000341060 SMAP2Q8WU79 429 aaPredicted RBP13.4□□□□□ -0.26
TDP2-201ENST00000341060 RFT1Q96AA3 541 aa13.4□□□□□ -0.26
TDP2-201ENST00000341060 THAP7Q9BT49 309 aaPredicted RBP13.4□□□□□ -0.26
TDP2-201ENST00000341060 GSDMCQ9BYG8 508 aa13.4□□□□□ -0.26
TDP2-201ENST00000341060 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP13.4□□□□□ -0.26
TDP2-201ENST00000341060 HDHD2Q9H0R4 259 aa13.4□□□□□ -0.26
TDP2-201ENST00000341060 CHRNA9Q9UGM1 479 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms