RNA–Protein interactions for RNA: ENST00000340417.7

LIN54-201, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIN54, Length 6,127 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-201ENST00000340417 TMEM17Q86X19 198 aa11.86□□□□□ -0.51
LIN54-201ENST00000340417 PAPD5Q8NDF8 572 aaKnown RBP11.86□□□□□ -0.51
LIN54-201ENST00000340417 OR8J2Q8NGG1 315 aa11.86□□□□□ -0.51
LIN54-201ENST00000340417 ZNF317Q96PQ6 595 aaPredicted RBP11.86□□□□□ -0.51
LIN54-201ENST00000340417 RAD51DO75771 328 aa11.86□□□□□ -0.51
LIN54-201ENST00000340417 GLP1RP43220 463 aa11.86□□□□□ -0.51
LIN54-201ENST00000340417 SLC6A12P48065 614 aa11.86□□□□□ -0.51
LIN54-201ENST00000340417 RUNX2Q13950 521 aa11.86□□□□□ -0.51
LIN54-201ENST00000340417 SLC22A25Q6T423 547 aa11.86□□□□□ -0.51
LIN54-201ENST00000340417 STON2Q8WXE9 905 aa11.86□□□□□ -0.51
LIN54-201ENST00000340417 QRSL1Q9H0R6 528 aaKnown RBP11.86□□□□□ -0.51
LIN54-201ENST00000340417 LNP1A1A4G5 178 aa11.86□□□□□ -0.51
LIN54-201ENST00000340417 SERPINA7P05543 415 aa11.86□□□□□ -0.51
LIN54-201ENST00000340417 ACTA2P62736 377 aa11.86□□□□□ -0.51
LIN54-201ENST00000340417 ACTG2P63267 376 aa11.86□□□□□ -0.51
LIN54-201ENST00000340417 MTFR2Q6P444 385 aa11.86□□□□□ -0.51
LIN54-201ENST00000340417 PRSS42Q7Z5A4 293 aa11.86□□□□□ -0.51
LIN54-201ENST00000340417 LAS2Q8IYD9 372 aa11.86□□□□□ -0.51
LIN54-201ENST00000340417 SDR9C7Q8NEX9 313 aa11.86□□□□□ -0.51
LIN54-201ENST00000340417 FAM71F1Q96KD3 344 aaPredicted RBP11.86□□□□□ -0.51
LIN54-201ENST00000340417 SECISBP2Q96T21 854 aaKnown RBP11.86□□□□□ -0.51
LIN54-201ENST00000340417 TREX2Q9BQ50 279 aaPredicted RBP11.86□□□□□ -0.51
LIN54-201ENST00000340417 VN1R1Q9GZP7 353 aa11.86□□□□□ -0.51
LIN54-201ENST00000340417 TRIP11Q15643 1979 aa11.86□□□□□ -0.51
LIN54-201ENST00000340417 APOL3O95236 402 aa11.85□□□□□ -0.51
LIN54-201ENST00000340417 APOBEC1P41238 236 aaKnown RBP11.85□□□□□ -0.51
LIN54-201ENST00000340417 PSMD7P51665 324 aa11.85□□□□□ -0.51
LIN54-201ENST00000340417 OLFML2AQ68BL7 652 aa11.85□□□□□ -0.51
LIN54-201ENST00000340417 FBXO42Q6P3S6 717 aa11.85□□□□□ -0.51
LIN54-201ENST00000340417 CMIPQ8IY22 773 aa11.85□□□□□ -0.51
LIN54-201ENST00000340417 ZNF768Q9H5H4 540 aaKnown RBP11.85□□□□□ -0.51
LIN54-201ENST00000340417 VAPAQ9P0L0 249 aa11.85□□□□□ -0.51
LIN54-201ENST00000340417 TRAV27A0A087WT01 109 aa11.85□□□□□ -0.51
LIN54-201ENST00000340417 OR2W5A6NFC9 320 aa11.85□□□□□ -0.51
LIN54-201ENST00000340417 SAGE2PA6NJ88 616 aa11.85□□□□□ -0.51
LIN54-201ENST00000340417 LIPCP11150 499 aa11.85□□□□□ -0.51
LIN54-201ENST00000340417 GPX3P22352 226 aa11.85□□□□□ -0.51
LIN54-201ENST00000340417 RUNDC3AQ59EK9 446 aa11.85□□□□□ -0.51
LIN54-201ENST00000340417 GPR139Q6DWJ6 353 aa11.85□□□□□ -0.51
LIN54-201ENST00000340417 GRINAQ7Z429 371 aa11.85□□□□□ -0.51
LIN54-201ENST00000340417 OR5T2Q8NGG2 359 aa11.85□□□□□ -0.51
LIN54-201ENST00000340417 OR5W2Q8NH69 310 aa11.85□□□□□ -0.51
LIN54-201ENST00000340417 TXLNGYQ9BZA5 131 aa11.85□□□□□ -0.51
LIN54-201ENST00000340417 DDX31Q9H8H2 851 aaKnown RBP11.85□□□□□ -0.51
LIN54-201ENST00000340417 FKRPQ9H9S5 495 aa11.85□□□□□ -0.51
LIN54-201ENST00000340417 KCNIP1Q9NZI2 227 aa11.85□□□□□ -0.51
LIN54-201ENST00000340417 C19orf53Q9UNZ5 99 aaPredicted RBP11.85□□□□□ -0.51
LIN54-201ENST00000340417 SYT7O43581 403 aa11.85□□□□□ -0.51
LIN54-201ENST00000340417 F13BP05160 661 aa11.85□□□□□ -0.51
LIN54-201ENST00000340417 CEACAM1P13688 526 aa11.85□□□□□ -0.51
LIN54-201ENST00000340417 HOXB3P14651 431 aaPredicted RBP11.85□□□□□ -0.51
LIN54-201ENST00000340417 VBP1P61758 197 aa11.85□□□□□ -0.51
LIN54-201ENST00000340417 MADCAM1Q13477 382 aa11.85□□□□□ -0.51
LIN54-201ENST00000340417 RSU1Q15404 277 aa11.85□□□□□ -0.51
LIN54-201ENST00000340417 PLCZ1Q86YW0 608 aa11.85□□□□□ -0.51
LIN54-201ENST00000340417 SLC16A11Q8NCK7 471 aa11.85□□□□□ -0.51
LIN54-201ENST00000340417 SPACA9Q96E40 222 aaPredicted RBP11.85□□□□□ -0.51
LIN54-201ENST00000340417 WWTR1Q9GZV5 400 aa11.85□□□□□ -0.51
LIN54-201ENST00000340417 NOP16Q9Y3C1 178 aaKnown RBP11.85□□□□□ -0.51
LIN54-201ENST00000340417 RBBP6Q7Z6E9 1792 aaKnown RBP11.85□□□□□ -0.51
LIN54-201ENST00000340417 ADAP00813 363 aa11.85□□□□□ -0.51
LIN54-201ENST00000340417 TGFBR2P37173 567 aa11.85□□□□□ -0.51
LIN54-201ENST00000340417 PPP1CAP62136 330 aa11.85□□□□□ -0.51
LIN54-201ENST00000340417 CYHR1Q6ZMK1 362 aa11.85□□□□□ -0.51
LIN54-201ENST00000340417 DIRAS2Q96HU8 199 aa11.85□□□□□ -0.51
LIN54-201ENST00000340417 KLHL15Q96M94 604 aa11.85□□□□□ -0.51
LIN54-201ENST00000340417 CBR3O75828 277 aa11.85□□□□□ -0.51
LIN54-201ENST00000340417 GSTT1P30711 240 aa11.85□□□□□ -0.51
LIN54-201ENST00000340417 CLDN15P56746 228 aa11.85□□□□□ -0.51
LIN54-201ENST00000340417 AP3S2P59780 193 aa11.85□□□□□ -0.51
LIN54-201ENST00000340417 MAD2L1BPQ15013 274 aaPredicted RBP11.85□□□□□ -0.51
LIN54-201ENST00000340417 ANKDD1AQ495B1 522 aa11.85□□□□□ -0.51
LIN54-201ENST00000340417 RHBDD2Q6NTF9 364 aa11.85□□□□□ -0.51
LIN54-201ENST00000340417 SLC46A3Q7Z3Q1 461 aa11.85□□□□□ -0.51
LIN54-201ENST00000340417 ANKRD37Q7Z713 158 aa11.85□□□□□ -0.51
LIN54-201ENST00000340417 PACRGLQ8N7B6 248 aa11.85□□□□□ -0.51
LIN54-201ENST00000340417 CYB561A3Q8NBI2 242 aa11.85□□□□□ -0.51
LIN54-201ENST00000340417 C16orf52Q8NHV5 167 aa11.85□□□□□ -0.51
LIN54-201ENST00000340417 DNASE2BQ8WZ79 361 aa11.85□□□□□ -0.51
LIN54-201ENST00000340417 FBXL20Q96IG2 436 aa11.85□□□□□ -0.51
LIN54-201ENST00000340417 SORT1Q99523 831 aa11.85□□□□□ -0.51
LIN54-201ENST00000340417 PAIP1Q9H074 479 aaKnown RBP11.85□□□□□ -0.51
LIN54-201ENST00000340417 ANKRA2Q9H9E1 313 aa11.85□□□□□ -0.51
LIN54-201ENST00000340417 A8MVM7 634 aa11.84□□□□□ -0.51
LIN54-201ENST00000340417 SSNA1O43805 119 aa11.84□□□□□ -0.51
LIN54-201ENST00000340417 BIDP55957 195 aa11.84□□□□□ -0.51
LIN54-201ENST00000340417 CISD2Q8N5K1 135 aaKnown RBP11.84□□□□□ -0.51
LIN54-201ENST00000340417 C1QTNF6Q9BXI9 259 aa11.84□□□□□ -0.51
LIN54-201ENST00000340417 TMEM74BQ9NUR3 256 aa11.84□□□□□ -0.51
LIN54-201ENST00000340417 KIF13BQ9NQT8 1826 aa11.84□□□□□ -0.51
LIN54-201ENST00000340417 OR2A25A4D2G3 310 aa11.84□□□□□ -0.51
LIN54-201ENST00000340417 HPP00738 406 aa11.84□□□□□ -0.51
LIN54-201ENST00000340417 GNG2P59768 71 aa11.84□□□□□ -0.51
LIN54-201ENST00000340417 TBC1D28Q2M2D7 210 aa11.84□□□□□ -0.51
LIN54-201ENST00000340417 ZBED5Q49AG3 693 aa11.84□□□□□ -0.51
LIN54-201ENST00000340417 TMEM200AQ86VY9 491 aa11.84□□□□□ -0.51
LIN54-201ENST00000340417 LSM14AQ8ND56 463 aaKnown RBP11.84□□□□□ -0.51
LIN54-201ENST00000340417 OR2T11Q8NH01 316 aa11.84□□□□□ -0.51
LIN54-201ENST00000340417 ACOT11Q8WXI4 607 aaPredicted RBP11.84□□□□□ -0.51
LIN54-201ENST00000340417 TIMD4Q96H15 378 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms