RNA–Protein interactions for RNA: ENST00000340192.11

ERCC1-203, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 1 (best) BASIC

Gene ERCC1, Length 949 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-203ENST00000340192 CALML5Q9NZT1 146 aa13.05□□□□□ -0.32
ERCC1-203ENST00000340192 SLAMF8Q9P0V8 285 aa13.05□□□□□ -0.32
ERCC1-203ENST00000340192 IGHV3-15A0A0B4J1V0 119 aa13.04□□□□□ -0.32
ERCC1-203ENST00000340192 TMEM247A6NEH6 219 aa13.04□□□□□ -0.32
ERCC1-203ENST00000340192 NUDT7P0C024 238 aa13.04□□□□□ -0.32
ERCC1-203ENST00000340192 POU2F1P14859 743 aa13.04□□□□□ -0.32
ERCC1-203ENST00000340192 ENPP1P22413 925 aa13.04□□□□□ -0.32
ERCC1-203ENST00000340192 AGTR1P30556 359 aa13.04□□□□□ -0.32
ERCC1-203ENST00000340192 UGT2B10P36537 528 aa13.04□□□□□ -0.32
ERCC1-203ENST00000340192 APOBEC1P41238 236 aaKnown RBP13.04□□□□□ -0.32
ERCC1-203ENST00000340192 IDH2P48735 452 aaKnown RBP13.04□□□□□ -0.32
ERCC1-203ENST00000340192 PCYT1AP49585 367 aa13.04□□□□□ -0.32
ERCC1-203ENST00000340192 RAC3P60763 192 aa13.04□□□□□ -0.32
ERCC1-203ENST00000340192 FADDQ13158 208 aa13.04□□□□□ -0.32
ERCC1-203ENST00000340192 RNPS1Q15287 305 aaKnown RBP13.04□□□□□ -0.32
ERCC1-203ENST00000340192 EXOC3L2Q2M3D2 409 aa13.04□□□□□ -0.32
ERCC1-203ENST00000340192 FCRLAQ7L513 359 aa13.04□□□□□ -0.32
ERCC1-203ENST00000340192 GRINAQ7Z429 371 aa13.04□□□□□ -0.32
ERCC1-203ENST00000340192 VRK2Q86Y07 508 aa13.04□□□□□ -0.32
ERCC1-203ENST00000340192 OR52P1PQ8NH57 321 aa13.04□□□□□ -0.32
ERCC1-203ENST00000340192 MAL2Q969L2 176 aa13.04□□□□□ -0.32
ERCC1-203ENST00000340192 TMEM19Q96HH6 336 aa13.04□□□□□ -0.32
ERCC1-203ENST00000340192 SIKE1Q9BRV8 207 aa13.04□□□□□ -0.32
ERCC1-203ENST00000340192 RAD21L1Q9H4I0 556 aa13.04□□□□□ -0.32
ERCC1-203ENST00000340192 RABEP2Q9H5N1 569 aa13.04□□□□□ -0.32
ERCC1-203ENST00000340192 RLIMQ9NVW2 624 aa13.04□□□□□ -0.32
ERCC1-203ENST00000340192 CHRNA9Q9UGM1 479 aa13.04□□□□□ -0.32
ERCC1-203ENST00000340192 NDRG3Q9UGV2 375 aa13.04□□□□□ -0.32
ERCC1-203ENST00000340192 TESMINQ9Y4I5 508 aa13.04□□□□□ -0.32
ERCC1-203ENST00000340192 A0A0G2JND7 137 aa13.03□□□□□ -0.32
ERCC1-203ENST00000340192 A0A0G2JPF8 293 aa13.03□□□□□ -0.32
ERCC1-203ENST00000340192 CDHR4A6H8M9 788 aa13.03□□□□□ -0.32
ERCC1-203ENST00000340192 HNRNPCL2B2RXH8 293 aa13.03□□□□□ -0.32
ERCC1-203ENST00000340192 HNRNPCL3B7ZW38 293 aa13.03□□□□□ -0.32
ERCC1-203ENST00000340192 C16orf97H3BN30 126 aa13.03□□□□□ -0.32
ERCC1-203ENST00000340192 HNRNPCL1O60812 293 aaKnown RBP13.03□□□□□ -0.32
ERCC1-203ENST00000340192 PRKD3O94806 890 aa13.03□□□□□ -0.32
ERCC1-203ENST00000340192 HNRNPCL4P0DMR1 293 aa13.03□□□□□ -0.32
ERCC1-203ENST00000340192 CCKARP32238 428 aa13.03□□□□□ -0.32
ERCC1-203ENST00000340192 LIN52Q52LA3 116 aa13.03□□□□□ -0.32
ERCC1-203ENST00000340192 SYT14P1Q58G82 188 aa13.03□□□□□ -0.32
ERCC1-203ENST00000340192 FBXW10Q5XX13 1052 aa13.03□□□□□ -0.32
ERCC1-203ENST00000340192 ZNF836Q6ZNA1 936 aa13.03□□□□□ -0.32
ERCC1-203ENST00000340192 ADGRG3Q86Y34 549 aa13.03□□□□□ -0.32
ERCC1-203ENST00000340192 TUSC5Q8IXB3 177 aa13.03□□□□□ -0.32
ERCC1-203ENST00000340192 SLC25A43Q8WUT9 341 aaPredicted RBP13.03□□□□□ -0.32
ERCC1-203ENST00000340192 WFIKKN1Q96NZ8 548 aa13.03□□□□□ -0.32
ERCC1-203ENST00000340192 ZNF385DQ9H6B1 395 aa13.03□□□□□ -0.32
ERCC1-203ENST00000340192 C12orf49Q9H741 205 aa13.03□□□□□ -0.32
ERCC1-203ENST00000340192 A4GALTQ9NPC4 353 aa13.03□□□□□ -0.32
ERCC1-203ENST00000340192 KLHL28Q9NXS3 571 aa13.03□□□□□ -0.32
ERCC1-203ENST00000340192 VAPAQ9P0L0 249 aa13.03□□□□□ -0.32
ERCC1-203ENST00000340192 KLHL13Q9P2N7 655 aa13.03□□□□□ -0.32
ERCC1-203ENST00000340192 ITGB1BP2Q9UKP3 347 aa13.03□□□□□ -0.32
ERCC1-203ENST00000340192 TRIM33Q9UPN9 1127 aa13.03□□□□□ -0.32
ERCC1-203ENST00000340192 ZNF443Q9Y2A4 671 aaPredicted RBP13.03□□□□□ -0.32
ERCC1-203ENST00000340192 SPIN1Q9Y657 262 aaPredicted RBP13.03□□□□□ -0.32
ERCC1-203ENST00000340192 TRBV5-3A0A0A0MS03 114 aa13.02□□□□□ -0.33
ERCC1-203ENST00000340192 A0A1W2PP18 115 aa13.02□□□□□ -0.33
ERCC1-203ENST00000340192 CFAP73A6NFT4 308 aa13.02□□□□□ -0.33
ERCC1-203ENST00000340192 SULT2B1O00204 365 aa13.02□□□□□ -0.33
ERCC1-203ENST00000340192 FAAHO00519 579 aa13.02□□□□□ -0.33
ERCC1-203ENST00000340192 SMAD9O15198 467 aaKnown RBP13.02□□□□□ -0.33
ERCC1-203ENST00000340192 TFPIP10646 304 aa13.02□□□□□ -0.33
ERCC1-203ENST00000340192 BMP2P12643 396 aa13.02□□□□□ -0.33
ERCC1-203ENST00000340192 UQCRBP14927 111 aa13.02□□□□□ -0.33
ERCC1-203ENST00000340192 KLK2P20151 261 aa13.02□□□□□ -0.33
ERCC1-203ENST00000340192 CCNA2P20248 432 aa13.02□□□□□ -0.33
ERCC1-203ENST00000340192 HTR3AP46098 478 aa13.02□□□□□ -0.33
ERCC1-203ENST00000340192 DIO1P49895 249 aa13.02□□□□□ -0.33
ERCC1-203ENST00000340192 EPS8Q12929 822 aa13.02□□□□□ -0.33
ERCC1-203ENST00000340192 LARS2Q15031 903 aaKnown RBP13.02□□□□□ -0.33
ERCC1-203ENST00000340192 TMEM201Q5SNT2 666 aa13.02□□□□□ -0.33
ERCC1-203ENST00000340192 TMPPEQ6ZT21 453 aa13.02□□□□□ -0.33
ERCC1-203ENST00000340192 LSRQ86X29 649 aaPredicted RBP13.02□□□□□ -0.33
ERCC1-203ENST00000340192 CDC20BQ86Y33 519 aa13.02□□□□□ -0.33
ERCC1-203ENST00000340192 ZNF440Q8IYI8 595 aa13.02□□□□□ -0.33
ERCC1-203ENST00000340192 SLC43A2Q8N370 569 aa13.02□□□□□ -0.33
ERCC1-203ENST00000340192 KLHL4Q9C0H6 718 aa13.02□□□□□ -0.33
ERCC1-203ENST00000340192 GP6Q9HCN6 339 aa13.02□□□□□ -0.33
ERCC1-203ENST00000340192 ZNF232Q9UNY5 417 aa13.02□□□□□ -0.33
ERCC1-203ENST00000340192 TMED7-TICAM2A0A0A6YYA0 188 aa13.01□□□□□ -0.33
ERCC1-203ENST00000340192 C5orf58C9J3I9 102 aa13.01□□□□□ -0.33
ERCC1-203ENST00000340192 CASKO14936 926 aa13.01□□□□□ -0.33
ERCC1-203ENST00000340192 CYTIPO60759 359 aa13.01□□□□□ -0.33
ERCC1-203ENST00000340192 GOSR1O95249 250 aa13.01□□□□□ -0.33
ERCC1-203ENST00000340192 FESP07332 822 aa13.01□□□□□ -0.33
ERCC1-203ENST00000340192 YES1P07947 543 aa13.01□□□□□ -0.33
ERCC1-203ENST00000340192 THBS1P07996 1170 aa13.01□□□□□ -0.33
ERCC1-203ENST00000340192 GKN3PP0CG01 181 aa13.01□□□□□ -0.33
ERCC1-203ENST00000340192 PPIBP23284 216 aaKnown RBP13.01□□□□□ -0.33
ERCC1-203ENST00000340192 FKBP2P26885 142 aaKnown RBP13.01□□□□□ -0.33
ERCC1-203ENST00000340192 TACR3P29371 465 aa13.01□□□□□ -0.33
ERCC1-203ENST00000340192 DNAJA1P31689 397 aaKnown RBP13.01□□□□□ -0.33
ERCC1-203ENST00000340192 SLC1A3P43003 542 aa13.01□□□□□ -0.33
ERCC1-203ENST00000340192 POLR2HP52434 150 aaKnown RBP13.01□□□□□ -0.33
ERCC1-203ENST00000340192 CSNK2A1P68400 391 aaPredicted RBP13.01□□□□□ -0.33
ERCC1-203ENST00000340192 RNF220Q5VTB9 566 aa13.01□□□□□ -0.33
ERCC1-203ENST00000340192 PRAMEF8Q5VWM4 474 aa13.01□□□□□ -0.33
ERCC1-203ENST00000340192 PRAMEF7Q5VXH5 474 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 79 ms