RNA–Protein interactions for RNA: ENST00000339865.9

USP47-202, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 2 BASIC

Gene USP47, Length 7,775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-202ENST00000339865 SLC41A2Q96JW4 573 aa12.09□□□□□ -0.47
USP47-202ENST00000339865 NLE1Q9NVX2 485 aaPredicted RBP12.09□□□□□ -0.47
USP47-202ENST00000339865 TAS2R46P59540 309 aa12.09□□□□□ -0.47
USP47-202ENST00000339865 RAP1AP62834 184 aa12.09□□□□□ -0.47
USP47-202ENST00000339865 MFGE8Q08431 387 aaPredicted RBP12.09□□□□□ -0.47
USP47-202ENST00000339865 BAMBIQ13145 260 aa12.09□□□□□ -0.47
USP47-202ENST00000339865 DEFB134Q4QY38 66 aa12.09□□□□□ -0.47
USP47-202ENST00000339865 KCTD11Q693B1 232 aa12.09□□□□□ -0.47
USP47-202ENST00000339865 ABHD12BQ7Z5M8 362 aaPredicted RBP12.09□□□□□ -0.47
USP47-202ENST00000339865 OR13C9Q8NGT0 318 aa12.09□□□□□ -0.47
USP47-202ENST00000339865 ZNF417Q8TAU3 575 aa12.09□□□□□ -0.47
USP47-202ENST00000339865 SMAP2Q8WU79 429 aaPredicted RBP12.09□□□□□ -0.47
USP47-202ENST00000339865 OR10A5Q9H207 317 aa12.09□□□□□ -0.47
USP47-202ENST00000339865 OR10A2Q9H208 303 aa12.09□□□□□ -0.47
USP47-202ENST00000339865 KDM6BO15054 1643 aa12.09□□□□□ -0.47
USP47-202ENST00000339865 I6L893 689 aaPredicted RBP12.09□□□□□ -0.47
USP47-202ENST00000339865 DDCP20711 480 aa12.09□□□□□ -0.47
USP47-202ENST00000339865 GLO1Q04760 184 aa12.09□□□□□ -0.47
USP47-202ENST00000339865 TMEM115Q12893 351 aaPredicted RBP12.09□□□□□ -0.47
USP47-202ENST00000339865 LYPD4Q6UWN0 246 aa12.09□□□□□ -0.47
USP47-202ENST00000339865 B3GNT7Q8NFL0 401 aa12.09□□□□□ -0.47
USP47-202ENST00000339865 OR5M8Q8NGP6 311 aa12.09□□□□□ -0.47
USP47-202ENST00000339865 OR4A16Q8NH70 328 aa12.09□□□□□ -0.47
USP47-202ENST00000339865 FCRL1Q96LA6 429 aa12.09□□□□□ -0.47
USP47-202ENST00000339865 SORBS1Q9BX66 1292 aaKnown RBP12.09□□□□□ -0.47
USP47-202ENST00000339865 LDHAL6BQ9BYZ2 381 aaPredicted RBP12.09□□□□□ -0.47
USP47-202ENST00000339865 NKX6-2Q9C056 277 aaPredicted RBP12.09□□□□□ -0.47
USP47-202ENST00000339865 TET3O43151 1660 aa12.09□□□□□ -0.47
USP47-202ENST00000339865 TMEM82A0PJX8 343 aa12.09□□□□□ -0.47
USP47-202ENST00000339865 DCTN6O00399 190 aa12.09□□□□□ -0.47
USP47-202ENST00000339865 CPOXP36551 454 aa12.09□□□□□ -0.47
USP47-202ENST00000339865 AMTP48728 403 aa12.09□□□□□ -0.47
USP47-202ENST00000339865 RPS26P11Q5JNZ5 115 aaPredicted RBP12.09□□□□□ -0.47
USP47-202ENST00000339865 TXNDC8Q6A555 127 aa12.09□□□□□ -0.47
USP47-202ENST00000339865 STT3BQ8TCJ2 826 aa12.09□□□□□ -0.47
USP47-202ENST00000339865 SH3RF2Q8TEC5 729 aa12.09□□□□□ -0.47
USP47-202ENST00000339865 HCAR1Q9BXC0 346 aa12.09□□□□□ -0.47
USP47-202ENST00000339865 NMES1Q9C002 83 aa12.09□□□□□ -0.47
USP47-202ENST00000339865 GAR1Q9NY12 217 aaKnown RBP12.09□□□□□ -0.47
USP47-202ENST00000339865 PLEK2Q9NYT0 353 aa12.09□□□□□ -0.47
USP47-202ENST00000339865 WIF1Q9Y5W5 379 aa12.09□□□□□ -0.47
USP47-202ENST00000339865 A0A1W2PQ09 198 aa12.09□□□□□ -0.47
USP47-202ENST00000339865 P04436 131 aa12.09□□□□□ -0.47
USP47-202ENST00000339865 CD1CP29017 333 aa12.09□□□□□ -0.47
USP47-202ENST00000339865 LTBQ06643 244 aa12.09□□□□□ -0.47
USP47-202ENST00000339865 BCL7AQ4VC05 210 aa12.09□□□□□ -0.47
USP47-202ENST00000339865 FBXL16Q8N461 479 aa12.09□□□□□ -0.47
USP47-202ENST00000339865 PARP16Q8N5Y8 322 aa12.09□□□□□ -0.47
USP47-202ENST00000339865 SUMF1Q8NBK3 374 aa12.09□□□□□ -0.47
USP47-202ENST00000339865 ASB11Q8WXH4 323 aa12.09□□□□□ -0.47
USP47-202ENST00000339865 CENPOQ9BU64 300 aa12.09□□□□□ -0.47
USP47-202ENST00000339865 THSD1Q9NS62 852 aa12.09□□□□□ -0.47
USP47-202ENST00000339865 OSGIN1Q9UJX0 560 aa12.09□□□□□ -0.47
USP47-202ENST00000339865 HSPE1-MOB4S4R3N1 261 aa12.09□□□□□ -0.47
USP47-202ENST00000339865 TNFRSF10AO00220 468 aa12.09□□□□□ -0.47
USP47-202ENST00000339865 HPNP05981 417 aa12.09□□□□□ -0.47
USP47-202ENST00000339865 HADHBP55084 474 aaKnown RBP12.09□□□□□ -0.47
USP47-202ENST00000339865 NSDHLQ15738 373 aa12.09□□□□□ -0.47
USP47-202ENST00000339865 PIGCQ92535 297 aa12.09□□□□□ -0.47
USP47-202ENST00000339865 RBM14Q96PK6 669 aaKnown RBP12.09□□□□□ -0.47
USP47-202ENST00000339865 CTDSP1Q9GZU7 261 aa12.09□□□□□ -0.47
USP47-202ENST00000339865 PLK3Q9H4B4 646 aa12.09□□□□□ -0.47
USP47-202ENST00000339865 INTS1Q8N201 2190 aaKnown RBP12.09□□□□□ -0.47
USP47-202ENST00000339865 GSTP1P09211 210 aaKnown RBP12.08□□□□□ -0.47
USP47-202ENST00000339865 RBMS2Q15434 407 aaKnown RBP12.08□□□□□ -0.47
USP47-202ENST00000339865 H3F3CQ6NXT2 135 aa12.08□□□□□ -0.47
USP47-202ENST00000339865 B3GNT9Q6UX72 402 aa12.08□□□□□ -0.47
USP47-202ENST00000339865 PRR22Q8IZ63 422 aa12.08□□□□□ -0.47
USP47-202ENST00000339865 MOCOSQ96EN8 888 aa12.08□□□□□ -0.47
USP47-202ENST00000339865 DPH1Q9BZG8 443 aa12.08□□□□□ -0.47
USP47-202ENST00000339865 WWTR1Q9GZV5 400 aa12.08□□□□□ -0.47
USP47-202ENST00000339865 C1orf198Q9H425 327 aa12.08□□□□□ -0.47
USP47-202ENST00000339865 KIAA1324LA8MWY0 1029 aaPredicted RBP12.08□□□□□ -0.48
USP47-202ENST00000339865 GALTP07902 379 aa12.08□□□□□ -0.48
USP47-202ENST00000339865 ARRB1P49407 418 aaPredicted RBP12.08□□□□□ -0.48
USP47-202ENST00000339865 OR4D2P58180 307 aa12.08□□□□□ -0.48
USP47-202ENST00000339865 CXCR4P61073 352 aa12.08□□□□□ -0.48
USP47-202ENST00000339865 C3orf38Q5JPI3 329 aa12.08□□□□□ -0.48
USP47-202ENST00000339865 OR8G2PQ6IF36 304 aa12.08□□□□□ -0.48
USP47-202ENST00000339865 KCTD13Q8WZ19 329 aa12.08□□□□□ -0.48
USP47-202ENST00000339865 RBPMSQ93062 196 aaKnown RBP12.08□□□□□ -0.48
USP47-202ENST00000339865 NSUN5Q96P11 429 aaKnown RBP12.08□□□□□ -0.48
USP47-202ENST00000339865 OLAHQ9NV23 265 aa12.08□□□□□ -0.48
USP47-202ENST00000339865 SPHK1Q9NYA1 384 aa12.08□□□□□ -0.48
USP47-202ENST00000339865 CNIH4Q9P003 139 aa12.08□□□□□ -0.48
USP47-202ENST00000339865 FAM221BA6H8Z2 402 aa12.08□□□□□ -0.48
USP47-202ENST00000339865 ARHGAP33O14559 1287 aa12.08□□□□□ -0.48
USP47-202ENST00000339865 EEDO75530 441 aaKnown RBP12.08□□□□□ -0.48
USP47-202ENST00000339865 GLSO94925 669 aaPredicted RBP12.08□□□□□ -0.48
USP47-202ENST00000339865 MMP12P39900 470 aa12.08□□□□□ -0.48
USP47-202ENST00000339865 DUSP6Q16828 381 aa12.08□□□□□ -0.48
USP47-202ENST00000339865 FAM74A1Q5RGS3 127 aa12.08□□□□□ -0.48
USP47-202ENST00000339865 NRMQ8IXM6 262 aa12.08□□□□□ -0.48
USP47-202ENST00000339865 NHLRC2Q8NBF2 726 aa12.08□□□□□ -0.48
USP47-202ENST00000339865 TMIGD2Q96BF3 282 aa12.08□□□□□ -0.48
USP47-202ENST00000339865 GALNT9Q9HCQ5 603 aa12.08□□□□□ -0.48
USP47-202ENST00000339865 STYXL1Q9Y6J8 313 aa12.08□□□□□ -0.48
USP47-202ENST00000339865 COL1A2P08123 1366 aa12.08□□□□□ -0.48
USP47-202ENST00000339865 OR2M7Q8NG81 312 aa12.08□□□□□ -0.48
USP47-202ENST00000339865 DUSP19Q8WTR2 217 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms