RNA–Protein interactions for RNA: ENST00000339037.3

LINC01116-202, Transcript of long intergenic non-protein coding RNA 1116, humanhuman

TSL 3 BASIC

Gene LINC01116, Length 838 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01116-202ENST00000339037 ATAD3AQ9NVI7 634 aa13.81□□□□□ -0.2
LINC01116-202ENST00000339037 GPATCH2Q9NW75 528 aa13.81□□□□□ -0.2
LINC01116-202ENST00000339037 NPAP1Q9NZP6 1156 aa13.81□□□□□ -0.2
LINC01116-202ENST00000339037 B3GALT5Q9Y2C3 310 aa13.81□□□□□ -0.2
LINC01116-202ENST00000339037 KCNE3Q9Y6H6 103 aa13.81□□□□□ -0.2
LINC01116-202ENST00000339037 IGHV4-30-2A0A087WSY4 118 aa13.8□□□□□ -0.2
LINC01116-202ENST00000339037 OR5H1A6NKK0 313 aa13.8□□□□□ -0.2
LINC01116-202ENST00000339037 ZNF724A8MTY0 619 aa13.8□□□□□ -0.2
LINC01116-202ENST00000339037 EIF4E2O60573 245 aaKnown RBP13.8□□□□□ -0.2
LINC01116-202ENST00000339037 PEX11AO75192 247 aa13.8□□□□□ -0.2
LINC01116-202ENST00000339037 SLU7O95391 586 aaKnown RBP13.8□□□□□ -0.2
LINC01116-202ENST00000339037 H6PDO95479 791 aa13.8□□□□□ -0.2
LINC01116-202ENST00000339037 PTNP21246 168 aa13.8□□□□□ -0.2
LINC01116-202ENST00000339037 IGHV1-2P23083 117 aa13.8□□□□□ -0.2
LINC01116-202ENST00000339037 TIGD2Q4W5G0 525 aa13.8□□□□□ -0.2
LINC01116-202ENST00000339037 TMEM108Q6UXF1 575 aa13.8□□□□□ -0.2
LINC01116-202ENST00000339037 NANOS1Q8WY41 292 aaKnown RBP13.8□□□□□ -0.2
LINC01116-202ENST00000339037 PPP3R2Q96LZ3 170 aa13.8□□□□□ -0.2
LINC01116-202ENST00000339037 ADAD1Q96M93 576 aaKnown RBP13.8□□□□□ -0.2
LINC01116-202ENST00000339037 ROPN1BQ9BZX4 212 aaPredicted RBP13.8□□□□□ -0.2
LINC01116-202ENST00000339037 ROPN1Q9HAT0 212 aaPredicted RBP13.8□□□□□ -0.2
LINC01116-202ENST00000339037 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.8□□□□□ -0.2
LINC01116-202ENST00000339037 ZDHHC2Q9UIJ5 367 aa13.8□□□□□ -0.2
LINC01116-202ENST00000339037 V9GYY5 206 aaPredicted RBP13.8□□□□□ -0.2
LINC01116-202ENST00000339037 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.79□□□□□ -0.2
LINC01116-202ENST00000339037 TYROBPO43914 113 aa13.79□□□□□ -0.2
LINC01116-202ENST00000339037 GPRIN2O60269 458 aa13.79□□□□□ -0.2
LINC01116-202ENST00000339037 PGM3O95394 542 aa13.79□□□□□ -0.2
LINC01116-202ENST00000339037 C6orf47O95873 294 aa13.79□□□□□ -0.2
LINC01116-202ENST00000339037 BPGMP07738 259 aa13.79□□□□□ -0.2
LINC01116-202ENST00000339037 LSM12Q3MHD2 195 aaKnown RBP13.79□□□□□ -0.2
LINC01116-202ENST00000339037 C6orf136Q5SQH8 315 aa13.79□□□□□ -0.2
LINC01116-202ENST00000339037 PDZK1Q5T2W1 519 aa13.79□□□□□ -0.2
LINC01116-202ENST00000339037 C6orf52Q5T4I8 152 aa13.79□□□□□ -0.2
LINC01116-202ENST00000339037 EMBQ6PCB8 327 aa13.79□□□□□ -0.2
LINC01116-202ENST00000339037 CLEC2AQ6UVW9 174 aa13.79□□□□□ -0.2
LINC01116-202ENST00000339037 NATD1Q8N6N6 113 aa13.79□□□□□ -0.2
LINC01116-202ENST00000339037 OR5D16Q8NGK9 328 aa13.79□□□□□ -0.2
LINC01116-202ENST00000339037 SFXN5Q8TD22 340 aa13.79□□□□□ -0.2
LINC01116-202ENST00000339037 ST8SIA1Q92185 356 aa13.79□□□□□ -0.2
LINC01116-202ENST00000339037 ZNF75CPQ92670 426 aaPredicted RBP13.79□□□□□ -0.2
LINC01116-202ENST00000339037 MOAP1Q96BY2 351 aa13.79□□□□□ -0.2
LINC01116-202ENST00000339037 CACNG6Q9BXT2 260 aa13.79□□□□□ -0.2
LINC01116-202ENST00000339037 NMUR2Q9GZQ4 415 aa13.79□□□□□ -0.2
LINC01116-202ENST00000339037 QRSL1Q9H0R6 528 aaKnown RBP13.79□□□□□ -0.2
LINC01116-202ENST00000339037 EMC3Q9P0I2 261 aa13.79□□□□□ -0.2
LINC01116-202ENST00000339037 CDC42EP3Q9UKI2 254 aa13.79□□□□□ -0.2
LINC01116-202ENST00000339037 POU2F3Q9UKI9 436 aa13.79□□□□□ -0.2
LINC01116-202ENST00000339037 GOLGA8QA0A0J9YX86 632 aa13.78□□□□□ -0.2
LINC01116-202ENST00000339037 FAM234BA2RU67 622 aa13.78□□□□□ -0.2
LINC01116-202ENST00000339037 GOLGA8OA6NCC3 632 aa13.78□□□□□ -0.2
LINC01116-202ENST00000339037 SERINC4A6NH21 518 aa13.78□□□□□ -0.2
LINC01116-202ENST00000339037 GOLGA8NF8WBI6 632 aa13.78□□□□□ -0.2
LINC01116-202ENST00000339037 LYPLA1O75608 230 aaPredicted RBP13.78□□□□□ -0.2
LINC01116-202ENST00000339037 RAD51DO75771 328 aa13.78□□□□□ -0.2
LINC01116-202ENST00000339037 CYP7B1O75881 506 aa13.78□□□□□ -0.2
LINC01116-202ENST00000339037 FAM157CP0CG43 387 aa13.78□□□□□ -0.2
LINC01116-202ENST00000339037 TTKP33981 857 aa13.78□□□□□ -0.2
LINC01116-202ENST00000339037 SERPINB5P36952 375 aa13.78□□□□□ -0.2
LINC01116-202ENST00000339037 ETV4P43268 484 aa13.78□□□□□ -0.2
LINC01116-202ENST00000339037 DIO1P49895 249 aa13.78□□□□□ -0.2
LINC01116-202ENST00000339037 CSNK2A1P68400 391 aaPredicted RBP13.78□□□□□ -0.2
LINC01116-202ENST00000339037 IRX1P78414 480 aaPredicted RBP13.78□□□□□ -0.2
LINC01116-202ENST00000339037 SKP2Q13309 424 aa13.78□□□□□ -0.2
LINC01116-202ENST00000339037 TMEM249Q2WGJ8 235 aa13.78□□□□□ -0.2
LINC01116-202ENST00000339037 ATP6AP1LQ52LC2 224 aa13.78□□□□□ -0.2
LINC01116-202ENST00000339037 FBXW9Q5XUX1 488 aa13.78□□□□□ -0.2
LINC01116-202ENST00000339037 WDR93Q6P2C0 686 aa13.78□□□□□ -0.2
LINC01116-202ENST00000339037 BHLHB9Q6PI77 547 aa13.78□□□□□ -0.2
LINC01116-202ENST00000339037 SLC22A25Q6T423 547 aa13.78□□□□□ -0.2
LINC01116-202ENST00000339037 UBE2J2Q8N2K1 259 aa13.78□□□□□ -0.2
LINC01116-202ENST00000339037 KRTCAP2Q8N6L1 136 aa13.78□□□□□ -0.2
LINC01116-202ENST00000339037 ZNF433Q8N7K0 673 aaPredicted RBP13.78□□□□□ -0.2
LINC01116-202ENST00000339037 OR5AK3PQ8NH89 298 aa13.78□□□□□ -0.2
LINC01116-202ENST00000339037 PKNOX2Q96KN3 472 aa13.78□□□□□ -0.2
LINC01116-202ENST00000339037 OR7D2Q96RA2 312 aa13.78□□□□□ -0.2
LINC01116-202ENST00000339037 SDF2Q99470 211 aa13.78□□□□□ -0.2
LINC01116-202ENST00000339037 PRPF18Q99633 342 aaKnown RBP13.78□□□□□ -0.2
LINC01116-202ENST00000339037 THUMPD3Q9BV44 507 aaKnown RBP13.78□□□□□ -0.2
LINC01116-202ENST00000339037 SERINC1Q9NRX5 453 aa13.78□□□□□ -0.2
LINC01116-202ENST00000339037 A0A096LNT2 108 aa13.77□□□□□ -0.21
LINC01116-202ENST00000339037 SULT2B1O00204 365 aa13.77□□□□□ -0.21
LINC01116-202ENST00000339037 CFLARO15519 480 aa13.77□□□□□ -0.21
LINC01116-202ENST00000339037 PHF1O43189 567 aaPredicted RBP13.77□□□□□ -0.21
LINC01116-202ENST00000339037 IGHV3-9P01782 118 aa13.77□□□□□ -0.21
LINC01116-202ENST00000339037 DHRS4L1P0CG22 281 aa13.77□□□□□ -0.21
LINC01116-202ENST00000339037 SOAT1P35610 550 aa13.77□□□□□ -0.21
LINC01116-202ENST00000339037 SESN3P58005 492 aa13.77□□□□□ -0.21
LINC01116-202ENST00000339037 DSCR9P59020 149 aa13.77□□□□□ -0.21
LINC01116-202ENST00000339037 RPS26P62854 115 aaKnown RBP13.77□□□□□ -0.21
LINC01116-202ENST00000339037 CHRNEQ04844 493 aa13.77□□□□□ -0.21
LINC01116-202ENST00000339037 MERTKQ12866 999 aa13.77□□□□□ -0.21
LINC01116-202ENST00000339037 GPR68Q15743 365 aa13.77□□□□□ -0.21
LINC01116-202ENST00000339037 SYT14P1Q58G82 188 aa13.77□□□□□ -0.21
LINC01116-202ENST00000339037 IL23RQ5VWK5 629 aa13.77□□□□□ -0.21
LINC01116-202ENST00000339037 ABLIM2Q6H8Q1 611 aa13.77□□□□□ -0.21
LINC01116-202ENST00000339037 C11orf71Q6IPW1 123 aa13.77□□□□□ -0.21
LINC01116-202ENST00000339037 KLHL17Q6TDP4 642 aa13.77□□□□□ -0.21
LINC01116-202ENST00000339037 TMPPEQ6ZT21 453 aa13.77□□□□□ -0.21
LINC01116-202ENST00000339037 MUC15Q8N387 334 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms