RNA–Protein interactions for RNA: ENST00000338399.8

CDK5RAP3-201, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK5RAP3, Length 1,866 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-201ENST00000338399 KIF18BQ86Y91 864 aa13.42□□□□□ -0.26
CDK5RAP3-201ENST00000338399 CCDC71Q8IV32 467 aaPredicted RBP13.42□□□□□ -0.26
CDK5RAP3-201ENST00000338399 CDK20Q8IZL9 346 aa13.42□□□□□ -0.26
CDK5RAP3-201ENST00000338399 CYP4Z2PQ8N1L4 340 aa13.42□□□□□ -0.26
CDK5RAP3-201ENST00000338399 BPIFA2Q96DR5 249 aa13.42□□□□□ -0.26
CDK5RAP3-201ENST00000338399 SECISBP2Q96T21 854 aaKnown RBP13.42□□□□□ -0.26
CDK5RAP3-201ENST00000338399 SH2D2AQ9NP31 389 aa13.42□□□□□ -0.26
CDK5RAP3-201ENST00000338399 PNPLA3Q9NST1 481 aa13.42□□□□□ -0.26
CDK5RAP3-201ENST00000338399 RYDENQ9NUL5 291 aaKnown RBP13.42□□□□□ -0.26
CDK5RAP3-201ENST00000338399 TAS2R10Q9NYW0 307 aa13.42□□□□□ -0.26
CDK5RAP3-201ENST00000338399 FUT1P19526 365 aa13.42□□□□□ -0.26
CDK5RAP3-201ENST00000338399 CTBP2P56545 445 aa13.42□□□□□ -0.26
CDK5RAP3-201ENST00000338399 ISL1P61371 349 aa13.42□□□□□ -0.26
CDK5RAP3-201ENST00000338399 IL5RAQ01344 420 aa13.42□□□□□ -0.26
CDK5RAP3-201ENST00000338399 CRYZQ08257 329 aaKnown RBP13.42□□□□□ -0.26
CDK5RAP3-201ENST00000338399 SNTA1Q13424 505 aa13.42□□□□□ -0.26
CDK5RAP3-201ENST00000338399 SLC30A6Q6NXT4 461 aa13.42□□□□□ -0.26
CDK5RAP3-201ENST00000338399 TMEM81Q6P7N7 255 aa13.42□□□□□ -0.26
CDK5RAP3-201ENST00000338399 POMZP3Q6PJE2 187 aa13.42□□□□□ -0.26
CDK5RAP3-201ENST00000338399 MDGA2Q7Z553 956 aa13.42□□□□□ -0.26
CDK5RAP3-201ENST00000338399 SETD9Q8NE22 299 aa13.42□□□□□ -0.26
CDK5RAP3-201ENST00000338399 SGCZQ96LD1 299 aa13.42□□□□□ -0.26
CDK5RAP3-201ENST00000338399 CCNL2Q96S94 520 aaPredicted RBP13.42□□□□□ -0.26
CDK5RAP3-201ENST00000338399 APOL4Q9BPW4 351 aa13.42□□□□□ -0.26
CDK5RAP3-201ENST00000338399 ING2Q9H160 280 aa13.42□□□□□ -0.26
CDK5RAP3-201ENST00000338399 EGLN3Q9H6Z9 239 aa13.42□□□□□ -0.26
CDK5RAP3-201ENST00000338399 CPNE5Q9HCH3 593 aa13.42□□□□□ -0.26
CDK5RAP3-201ENST00000338399 TEKT2Q9UIF3 430 aa13.42□□□□□ -0.26
CDK5RAP3-201ENST00000338399 OSGIN1Q9UJX0 560 aa13.42□□□□□ -0.26
CDK5RAP3-201ENST00000338399 TMEM5Q9Y2B1 443 aa13.42□□□□□ -0.26
CDK5RAP3-201ENST00000338399 MAGEA13PA6NCF6 341 aa13.41□□□□□ -0.26
CDK5RAP3-201ENST00000338399 ZAR1LA6NP61 321 aa13.41□□□□□ -0.26
CDK5RAP3-201ENST00000338399 WISP1O95388 367 aa13.41□□□□□ -0.26
CDK5RAP3-201ENST00000338399 F10P00742 488 aa13.41□□□□□ -0.26
CDK5RAP3-201ENST00000338399 CCNA2P20248 432 aa13.41□□□□□ -0.26
CDK5RAP3-201ENST00000338399 MSX1P28360 303 aa13.41□□□□□ -0.26
CDK5RAP3-201ENST00000338399 GGT2P36268 569 aa13.41□□□□□ -0.26
CDK5RAP3-201ENST00000338399 RPS6KA3P51812 740 aa13.41□□□□□ -0.26
CDK5RAP3-201ENST00000338399 SUMO3P55854 103 aaPredicted RBP13.41□□□□□ -0.26
CDK5RAP3-201ENST00000338399 CD47Q08722 323 aa13.41□□□□□ -0.26
CDK5RAP3-201ENST00000338399 ABHD17BQ5VST6 288 aa13.41□□□□□ -0.26
CDK5RAP3-201ENST00000338399 RTL4Q6ZR62 310 aa13.41□□□□□ -0.26
CDK5RAP3-201ENST00000338399 RASSF6Q6ZTQ3 369 aa13.41□□□□□ -0.26
CDK5RAP3-201ENST00000338399 TMPRSS11FQ6ZWK6 438 aa13.41□□□□□ -0.26
CDK5RAP3-201ENST00000338399 ZNF786Q8N393 782 aa13.41□□□□□ -0.26
CDK5RAP3-201ENST00000338399 FAM81AQ8TBF8 368 aa13.41□□□□□ -0.26
CDK5RAP3-201ENST00000338399 THAP4Q8WY91 577 aa13.41□□□□□ -0.26
CDK5RAP3-201ENST00000338399 UBE2FQ969M7 185 aa13.41□□□□□ -0.26
CDK5RAP3-201ENST00000338399 SCNM1Q9BWG6 230 aa13.41□□□□□ -0.26
CDK5RAP3-201ENST00000338399 ANGPTL4Q9BY76 406 aa13.41□□□□□ -0.26
CDK5RAP3-201ENST00000338399 PLA2G12AQ9BZM1 189 aa13.41□□□□□ -0.26
CDK5RAP3-201ENST00000338399 C12orf10Q9HB07 376 aa13.41□□□□□ -0.26
CDK5RAP3-201ENST00000338399 PROK2Q9HC23 129 aa13.41□□□□□ -0.26
CDK5RAP3-201ENST00000338399 AASSQ9UDR5 926 aa13.41□□□□□ -0.26
CDK5RAP3-201ENST00000338399 DCHS1Q96JQ0 3298 aa13.41□□□□□ -0.26
CDK5RAP3-201ENST00000338399 IGKV1D-42A0A075B6H8 117 aa13.4□□□□□ -0.26
CDK5RAP3-201ENST00000338399 IGLV3-32A0A0A0MS00 114 aa13.4□□□□□ -0.26
CDK5RAP3-201ENST00000338399 UNC119BA6NIH7 251 aa13.4□□□□□ -0.26
CDK5RAP3-201ENST00000338399 ENO4A6NNW6 628 aa13.4□□□□□ -0.26
CDK5RAP3-201ENST00000338399 G3V3Y1 287 aa13.4□□□□□ -0.26
CDK5RAP3-201ENST00000338399 CXCR1P25024 350 aa13.4□□□□□ -0.26
CDK5RAP3-201ENST00000338399 ELK4P28324 431 aa13.4□□□□□ -0.26
CDK5RAP3-201ENST00000338399 CYB561P49447 251 aa13.4□□□□□ -0.26
CDK5RAP3-201ENST00000338399 HLCSP50747 726 aa13.4□□□□□ -0.26
CDK5RAP3-201ENST00000338399 OC90Q02509 493 aaPredicted RBP13.4□□□□□ -0.26
CDK5RAP3-201ENST00000338399 CTU2Q2VPK5 515 aaKnown RBP13.4□□□□□ -0.26
CDK5RAP3-201ENST00000338399 ARSKQ6UWY0 536 aa13.4□□□□□ -0.26
CDK5RAP3-201ENST00000338399 GALNT16Q8N428 558 aa13.4□□□□□ -0.26
CDK5RAP3-201ENST00000338399 WDSUB1Q8N9V3 476 aa13.4□□□□□ -0.26
CDK5RAP3-201ENST00000338399 OR2M3Q8NG83 312 aa13.4□□□□□ -0.26
CDK5RAP3-201ENST00000338399 TMEM234Q8WY98 164 aa13.4□□□□□ -0.26
CDK5RAP3-201ENST00000338399 FRMD6Q96NE9 622 aa13.4□□□□□ -0.26
CDK5RAP3-201ENST00000338399 FBXL2Q9UKC9 423 aa13.4□□□□□ -0.26
CDK5RAP3-201ENST00000338399 VDAC3Q9Y277 283 aa13.4□□□□□ -0.26
CDK5RAP3-201ENST00000338399 CELSR3Q9NYQ7 3312 aa13.4□□□□□ -0.26
CDK5RAP3-201ENST00000338399 A6NL46 340 aa13.4□□□□□ -0.26
CDK5RAP3-201ENST00000338399 EFCAB9A8MZ26 197 aa13.4□□□□□ -0.26
CDK5RAP3-201ENST00000338399 SAGP10523 405 aaPredicted RBP13.4□□□□□ -0.26
CDK5RAP3-201ENST00000338399 PRKCAP17252 672 aa13.4□□□□□ -0.26
CDK5RAP3-201ENST00000338399 POLR2HP52434 150 aaKnown RBP13.4□□□□□ -0.26
CDK5RAP3-201ENST00000338399 RRADP55042 308 aa13.4□□□□□ -0.26
CDK5RAP3-201ENST00000338399 EGR4Q05215 589 aa13.4□□□□□ -0.26
CDK5RAP3-201ENST00000338399 GRINAQ7Z429 371 aa13.4□□□□□ -0.26
CDK5RAP3-201ENST00000338399 ZNF227Q86WZ6 799 aa13.4□□□□□ -0.26
CDK5RAP3-201ENST00000338399 IQCF1Q8N6M8 205 aa13.4□□□□□ -0.26
CDK5RAP3-201ENST00000338399 OR4K17Q8NGC6 315 aa13.4□□□□□ -0.26
CDK5RAP3-201ENST00000338399 OR8D4Q8NGM9 314 aa13.4□□□□□ -0.26
CDK5RAP3-201ENST00000338399 CNIH3Q8TBE1 160 aa13.4□□□□□ -0.26
CDK5RAP3-201ENST00000338399 NPAS1Q99742 590 aa13.4□□□□□ -0.26
CDK5RAP3-201ENST00000338399 TMEM43Q9BTV4 400 aa13.4□□□□□ -0.26
CDK5RAP3-201ENST00000338399 RASSF1Q9NS23 344 aa13.4□□□□□ -0.26
CDK5RAP3-201ENST00000338399 HSPE1-MOB4S4R3N1 261 aa13.4□□□□□ -0.26
CDK5RAP3-201ENST00000338399 TMED7-TICAM2A0A0A6YYA0 188 aa13.39□□□□□ -0.27
CDK5RAP3-201ENST00000338399 M0R129 80 aa13.39□□□□□ -0.27
CDK5RAP3-201ENST00000338399 TNFAIP8O95379 198 aa13.39□□□□□ -0.27
CDK5RAP3-201ENST00000338399 P04436 131 aa13.39□□□□□ -0.27
CDK5RAP3-201ENST00000338399 NUP107P57740 925 aa13.39□□□□□ -0.27
CDK5RAP3-201ENST00000338399 CDK5R2Q13319 367 aa13.39□□□□□ -0.27
CDK5RAP3-201ENST00000338399 GINS1Q14691 196 aa13.39□□□□□ -0.27
CDK5RAP3-201ENST00000338399 MAD2L1BPQ15013 274 aaPredicted RBP13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms