RNA–Protein interactions for RNA: ENST00000337571.8

CAPN3-202, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,271 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-202ENST00000337571 POTEKPQ9BYX7 375 aa9.46□□□□□ -0.9
CAPN3-202ENST00000337571 QRSL1Q9H0R6 528 aaKnown RBP9.46□□□□□ -0.9
CAPN3-202ENST00000337571 OR51I1Q9H343 314 aa9.46□□□□□ -0.9
CAPN3-202ENST00000337571 CENPHQ9H3R5 247 aa9.46□□□□□ -0.9
CAPN3-202ENST00000337571 ALG2Q9H553 416 aa9.46□□□□□ -0.9
CAPN3-202ENST00000337571 COQ10BQ9H8M1 238 aa9.46□□□□□ -0.9
CAPN3-202ENST00000337571 POLE3Q9NRF9 147 aa9.46□□□□□ -0.9
CAPN3-202ENST00000337571 ACER3Q9NUN7 267 aa9.46□□□□□ -0.9
CAPN3-202ENST00000337571 FAIMQ9NVQ4 179 aa9.46□□□□□ -0.9
CAPN3-202ENST00000337571 EMC3Q9P0I2 261 aa9.46□□□□□ -0.9
CAPN3-202ENST00000337571 SLC35A3Q9Y2D2 325 aa9.46□□□□□ -0.9
CAPN3-202ENST00000337571 RAP2CQ9Y3L5 183 aa9.46□□□□□ -0.9
CAPN3-202ENST00000337571 WDR45Q9Y484 360 aa9.46□□□□□ -0.9
CAPN3-202ENST00000337571 A0A1W2PP18 115 aa9.45□□□□□ -0.9
CAPN3-202ENST00000337571 ZNF724A8MTY0 619 aa9.45□□□□□ -0.9
CAPN3-202ENST00000337571 ZNF814B7Z6K7 855 aa9.45□□□□□ -0.9
CAPN3-202ENST00000337571 TM9SF1O15321 606 aa9.45□□□□□ -0.9
CAPN3-202ENST00000337571 ITM2AO43736 263 aa9.45□□□□□ -0.9
CAPN3-202ENST00000337571 LYZL6O75951 148 aa9.45□□□□□ -0.9
CAPN3-202ENST00000337571 OR12D1P0DN82 309 aa9.45□□□□□ -0.9
CAPN3-202ENST00000337571 NID1P14543 1247 aa9.45□□□□□ -0.9
CAPN3-202ENST00000337571 GGT1P19440 569 aa9.45□□□□□ -0.9
CAPN3-202ENST00000337571 S100A3P33764 101 aa9.45□□□□□ -0.9
CAPN3-202ENST00000337571 RYKP34925 604 aa9.45□□□□□ -0.9
CAPN3-202ENST00000337571 ETV4P43268 484 aa9.45□□□□□ -0.9
CAPN3-202ENST00000337571 SLC1A6P48664 564 aa9.45□□□□□ -0.9
CAPN3-202ENST00000337571 ANXA11P50995 505 aaKnown RBP9.45□□□□□ -0.9
CAPN3-202ENST00000337571 CLNS1AP54105 237 aaKnown RBP9.45□□□□□ -0.9
CAPN3-202ENST00000337571 ZNF844Q08AG5 666 aa9.45□□□□□ -0.9
CAPN3-202ENST00000337571 STX3Q13277 289 aa9.45□□□□□ -0.9
CAPN3-202ENST00000337571 SKP2Q13309 424 aa9.45□□□□□ -0.9
CAPN3-202ENST00000337571 PPA1Q15181 289 aa9.45□□□□□ -0.9
CAPN3-202ENST00000337571 CLEC12BQ2HXU8 276 aa9.45□□□□□ -0.9
CAPN3-202ENST00000337571 DPY19L1Q2PZI1 675 aa9.45□□□□□ -0.9
CAPN3-202ENST00000337571 SYT14P1Q58G82 188 aa9.45□□□□□ -0.9
CAPN3-202ENST00000337571 TMPPEQ6ZT21 453 aa9.45□□□□□ -0.9
CAPN3-202ENST00000337571 MTDHQ86UE4 582 aaKnown RBP9.45□□□□□ -0.9
CAPN3-202ENST00000337571 P2RY8Q86VZ1 359 aa9.45□□□□□ -0.9
CAPN3-202ENST00000337571 ANKRD46Q86W74 232 aa9.45□□□□□ -0.9
CAPN3-202ENST00000337571 ARFGAP2Q8N6H7 521 aa9.45□□□□□ -0.9
CAPN3-202ENST00000337571 PIWIL2Q8TC59 973 aaKnown RBP9.45□□□□□ -0.9
CAPN3-202ENST00000337571 MIPOL1Q8TD10 442 aa9.45□□□□□ -0.9
CAPN3-202ENST00000337571 AENQ8WTP8 325 aaKnown RBP9.45□□□□□ -0.9
CAPN3-202ENST00000337571 RAB8BQ92930 207 aa9.45□□□□□ -0.9
CAPN3-202ENST00000337571 ROPN1LQ96C74 230 aa9.45□□□□□ -0.9
CAPN3-202ENST00000337571 PKNOX2Q96KN3 472 aa9.45□□□□□ -0.9
CAPN3-202ENST00000337571 KCNK9Q9NPC2 374 aa9.45□□□□□ -0.9
CAPN3-202ENST00000337571 ST6GALNAC1Q9NSC7 600 aaPredicted RBP9.45□□□□□ -0.9
CAPN3-202ENST00000337571 MARCOQ9UEW3 520 aaPredicted RBP9.45□□□□□ -0.9
CAPN3-202ENST00000337571 PRSS50Q9UI38 385 aa9.45□□□□□ -0.9
CAPN3-202ENST00000337571 NAV3Q8IVL0 2385 aa9.44□□□□□ -0.9
CAPN3-202ENST00000337571 CIB4A0PJX0 185 aa9.44□□□□□ -0.9
CAPN3-202ENST00000337571 ETV2O00321 342 aaPredicted RBP9.44□□□□□ -0.9
CAPN3-202ENST00000337571 GPR171O14626 319 aa9.44□□□□□ -0.9
CAPN3-202ENST00000337571 SMAD9O15198 467 aaKnown RBP9.44□□□□□ -0.9
CAPN3-202ENST00000337571 TP53P04637 393 aaPredicted RBP9.44□□□□□ -0.9
CAPN3-202ENST00000337571 GUSBP08236 651 aa9.44□□□□□ -0.9
CAPN3-202ENST00000337571 LBPP18428 481 aa9.44□□□□□ -0.9
CAPN3-202ENST00000337571 HTR3AP46098 478 aa9.44□□□□□ -0.9
CAPN3-202ENST00000337571 CLK1P49759 484 aaKnown RBP9.44□□□□□ -0.9
CAPN3-202ENST00000337571 KHKP50053 298 aa9.44□□□□□ -0.9
CAPN3-202ENST00000337571 BSPH1Q075Z2 132 aa9.44□□□□□ -0.9
CAPN3-202ENST00000337571 TNK1Q13470 666 aa9.44□□□□□ -0.9
CAPN3-202ENST00000337571 VEZF1Q14119 521 aa9.44□□□□□ -0.9
CAPN3-202ENST00000337571 GNA13Q14344 377 aa9.44□□□□□ -0.9
CAPN3-202ENST00000337571 LINC01559Q495D7 138 aa9.44□□□□□ -0.9
CAPN3-202ENST00000337571 ZNF672Q499Z4 452 aaPredicted RBP9.44□□□□□ -0.9
CAPN3-202ENST00000337571 TIMM23BQ5SRD1 257 aa9.44□□□□□ -0.9
CAPN3-202ENST00000337571 TYW3Q6IPR3 259 aaKnown RBP9.44□□□□□ -0.9
CAPN3-202ENST00000337571 HEPHL1Q6MZM0 1159 aa9.44□□□□□ -0.9
CAPN3-202ENST00000337571 WDR93Q6P2C0 686 aa9.44□□□□□ -0.9
CAPN3-202ENST00000337571 TNFAIP8L2Q6P589 184 aaPredicted RBP9.44□□□□□ -0.9
CAPN3-202ENST00000337571 GRINAQ7Z429 371 aa9.44□□□□□ -0.9
CAPN3-202ENST00000337571 DEPDC4Q8N2C3 294 aa9.44□□□□□ -0.9
CAPN3-202ENST00000337571 TRIML2Q8N7C3 387 aa9.44□□□□□ -0.9
CAPN3-202ENST00000337571 IGFBPL1Q8WX77 278 aa9.44□□□□□ -0.9
CAPN3-202ENST00000337571 TESCQ96BS2 214 aa9.44□□□□□ -0.9
CAPN3-202ENST00000337571 RADILQ96JH8 1075 aa9.44□□□□□ -0.9
CAPN3-202ENST00000337571 ZNF300Q96RE9 604 aaPredicted RBP9.44□□□□□ -0.9
CAPN3-202ENST00000337571 PAIP2Q9BPZ3 127 aaKnown RBP9.44□□□□□ -0.9
CAPN3-202ENST00000337571 SLC35A5Q9BS91 424 aa9.44□□□□□ -0.9
CAPN3-202ENST00000337571 ZNF350Q9GZX5 532 aa9.44□□□□□ -0.9
CAPN3-202ENST00000337571 SERHL2Q9H4I8 314 aa9.44□□□□□ -0.9
CAPN3-202ENST00000337571 SSU72Q9NP77 194 aaKnown RBP9.44□□□□□ -0.9
CAPN3-202ENST00000337571 CISD1Q9NZ45 108 aaKnown RBP9.44□□□□□ -0.9
CAPN3-202ENST00000337571 KCNE5Q9UJ90 142 aa9.44□□□□□ -0.9
CAPN3-202ENST00000337571 LIPT1Q9Y234 373 aa9.44□□□□□ -0.9
CAPN3-202ENST00000337571 NOSIPQ9Y314 301 aaKnown RBP9.44□□□□□ -0.9
CAPN3-202ENST00000337571 DPRXA6NFQ7 191 aa9.43□□□□□ -0.9
CAPN3-202ENST00000337571 CCT8L1PA6NM43 557 aa9.43□□□□□ -0.9
CAPN3-202ENST00000337571 DNAJA2O60884 412 aa9.43□□□□□ -0.9
CAPN3-202ENST00000337571 MRPL33O75394 65 aaKnown RBP9.43□□□□□ -0.9
CAPN3-202ENST00000337571 H6PDO95479 791 aa9.43□□□□□ -0.9
CAPN3-202ENST00000337571 F12P00748 615 aaPredicted RBP9.43□□□□□ -0.9
CAPN3-202ENST00000337571 UQCRBP14927 111 aa9.43□□□□□ -0.9
CAPN3-202ENST00000337571 CCNA2P20248 432 aa9.43□□□□□ -0.9
CAPN3-202ENST00000337571 PGM1P36871 562 aa9.43□□□□□ -0.9
CAPN3-202ENST00000337571 MAGEA8P43361 318 aa9.43□□□□□ -0.9
CAPN3-202ENST00000337571 IDH2P48735 452 aaKnown RBP9.43□□□□□ -0.9
CAPN3-202ENST00000337571 OR2B6P58173 313 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 116.9 ms