RNA–Protein interactions for RNA: ENST00000337526.10

RTN4-202, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,790 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-202ENST00000337526 RAP1BP61224 184 aa12.84□□□□□ -0.35
RTN4-202ENST00000337526 RAP1AP62834 184 aa12.84□□□□□ -0.35
RTN4-202ENST00000337526 IL13RA1P78552 427 aa12.84□□□□□ -0.35
RTN4-202ENST00000337526 RPE65Q16518 533 aa12.84□□□□□ -0.35
RTN4-202ENST00000337526 FOXB2Q5VYV0 432 aa12.84□□□□□ -0.35
RTN4-202ENST00000337526 HBMQ6B0K9 141 aa12.84□□□□□ -0.35
RTN4-202ENST00000337526 SPNS2Q8IVW8 549 aa12.84□□□□□ -0.35
RTN4-202ENST00000337526 SLC35F3Q8IY50 421 aa12.84□□□□□ -0.35
RTN4-202ENST00000337526 PBDC1Q9BVG4 233 aa12.84□□□□□ -0.35
RTN4-202ENST00000337526 TNFRSF12AQ9NP84 129 aa12.84□□□□□ -0.35
RTN4-202ENST00000337526 UBQLN4Q9NRR5 601 aa12.84□□□□□ -0.35
RTN4-202ENST00000337526 CPNE7Q9UBL6 633 aa12.84□□□□□ -0.35
RTN4-202ENST00000337526 HCFC2Q9Y5Z7 792 aa12.84□□□□□ -0.35
RTN4-202ENST00000337526 PRSS38A1L453 326 aa12.83□□□□□ -0.36
RTN4-202ENST00000337526 PRAMEF26H0Y7S4 382 aa12.83□□□□□ -0.36
RTN4-202ENST00000337526 SHC1P29353 583 aa12.83□□□□□ -0.36
RTN4-202ENST00000337526 RBMS1P29558 406 aaKnown RBP12.83□□□□□ -0.36
RTN4-202ENST00000337526 DLSTP36957 453 aa12.83□□□□□ -0.36
RTN4-202ENST00000337526 OPRD1P41143 372 aa12.83□□□□□ -0.36
RTN4-202ENST00000337526 PGFP49763 221 aa12.83□□□□□ -0.36
RTN4-202ENST00000337526 MRPL49Q13405 166 aaKnown RBP12.83□□□□□ -0.36
RTN4-202ENST00000337526 DUSP7Q16829 419 aa12.83□□□□□ -0.36
RTN4-202ENST00000337526 TMPPEQ6ZT21 453 aa12.83□□□□□ -0.36
RTN4-202ENST00000337526 SIMC1Q8NDZ2 872 aa12.83□□□□□ -0.36
RTN4-202ENST00000337526 OR9A4Q8NGU2 314 aa12.83□□□□□ -0.36
RTN4-202ENST00000337526 WFDC5Q8TCV5 224 aa12.83□□□□□ -0.36
RTN4-202ENST00000337526 SNX18Q96RF0 628 aa12.83□□□□□ -0.36
RTN4-202ENST00000337526 GLIPR2Q9H4G4 154 aa12.83□□□□□ -0.36
RTN4-202ENST00000337526 RLIMQ9NVW2 624 aa12.83□□□□□ -0.36
RTN4-202ENST00000337526 CCL26Q9Y258 94 aa12.83□□□□□ -0.36
RTN4-202ENST00000337526 ZNF175Q9Y473 711 aa12.83□□□□□ -0.36
RTN4-202ENST00000337526 PCDHGA6Q9Y5G7 932 aa12.83□□□□□ -0.36
RTN4-202ENST00000337526 GAPDHSO14556 408 aaPredicted RBP12.83□□□□□ -0.36
RTN4-202ENST00000337526 C12orf45Q8N5I9 185 aaPredicted RBP12.83□□□□□ -0.36
RTN4-202ENST00000337526 TMEM185AQ8NFB2 350 aa12.83□□□□□ -0.36
RTN4-202ENST00000337526 TM4SF18Q96CE8 201 aa12.83□□□□□ -0.36
RTN4-202ENST00000337526 MYADMQ96S97 322 aa12.83□□□□□ -0.36
RTN4-202ENST00000337526 ZNF436Q9C0F3 470 aaPredicted RBP12.83□□□□□ -0.36
RTN4-202ENST00000337526 METTL17Q9H7H0 456 aaPredicted RBP12.83□□□□□ -0.36
RTN4-202ENST00000337526 CLEC2DQ9UHP7 191 aa12.83□□□□□ -0.36
RTN4-202ENST00000337526 CBLCQ9ULV8 474 aa12.83□□□□□ -0.36
RTN4-202ENST00000337526 PPT2Q9UMR5 302 aa12.83□□□□□ -0.36
RTN4-202ENST00000337526 ACOD1A6NK06 481 aa12.83□□□□□ -0.36
RTN4-202ENST00000337526 F5H5K5 113 aa12.83□□□□□ -0.36
RTN4-202ENST00000337526 FXYD1O00168 92 aa12.83□□□□□ -0.36
RTN4-202ENST00000337526 TSPAN15O95858 294 aa12.83□□□□□ -0.36
RTN4-202ENST00000337526 LIPCP11150 499 aa12.83□□□□□ -0.36
RTN4-202ENST00000337526 MAOBP27338 520 aa12.83□□□□□ -0.36
RTN4-202ENST00000337526 SLX4IPQ5VYV7 408 aa12.83□□□□□ -0.36
RTN4-202ENST00000337526 GPR139Q6DWJ6 353 aa12.83□□□□□ -0.36
RTN4-202ENST00000337526 FAM111BQ6SJ93 734 aa12.83□□□□□ -0.36
RTN4-202ENST00000337526 OR51T1Q8NGJ9 327 aa12.83□□□□□ -0.36
RTN4-202ENST00000337526 PRRT1Q99946 306 aa12.83□□□□□ -0.36
RTN4-202ENST00000337526 ENY2Q9NPA8 101 aa12.83□□□□□ -0.36
RTN4-202ENST00000337526 GLS2Q9UI32 602 aa12.83□□□□□ -0.36
RTN4-202ENST00000337526 ZNF281Q9Y2X9 895 aa12.83□□□□□ -0.36
RTN4-202ENST00000337526 BOLA1Q9Y3E2 137 aa12.83□□□□□ -0.36
RTN4-202ENST00000337526 H0YGG7 62 aa12.82□□□□□ -0.36
RTN4-202ENST00000337526 HTR3BO95264 441 aa12.82□□□□□ -0.36
RTN4-202ENST00000337526 BPNT1O95861 308 aa12.82□□□□□ -0.36
RTN4-202ENST00000337526 SERPINA5P05154 406 aa12.82□□□□□ -0.36
RTN4-202ENST00000337526 F13BP05160 661 aa12.82□□□□□ -0.36
RTN4-202ENST00000337526 DUSP3P51452 185 aaPredicted RBP12.82□□□□□ -0.36
RTN4-202ENST00000337526 PPA1Q15181 289 aa12.82□□□□□ -0.36
RTN4-202ENST00000337526 KRBOX4Q5JUW0 171 aa12.82□□□□□ -0.36
RTN4-202ENST00000337526 NXNL2Q5VZ03 156 aa12.82□□□□□ -0.36
RTN4-202ENST00000337526 OR7E24Q6IFN5 339 aa12.82□□□□□ -0.36
RTN4-202ENST00000337526 ZNF419Q96HQ0 510 aaPredicted RBP12.82□□□□□ -0.36
RTN4-202ENST00000337526 NECTIN4Q96NY8 510 aa12.82□□□□□ -0.36
RTN4-202ENST00000337526 TNFRSF13CQ96RJ3 184 aa12.82□□□□□ -0.36
RTN4-202ENST00000337526 BTAF1O14981 1849 aa12.82□□□□□ -0.36
RTN4-202ENST00000337526 SRPX2O60687 465 aaPredicted RBP12.82□□□□□ -0.36
RTN4-202ENST00000337526 CSO75390 466 aaKnown RBP12.82□□□□□ -0.36
RTN4-202ENST00000337526 OR8G3PP0DMU2 310 aa12.82□□□□□ -0.36
RTN4-202ENST00000337526 PSMB1P20618 241 aaKnown RBP12.82□□□□□ -0.36
RTN4-202ENST00000337526 VEGFBP49765 207 aa12.82□□□□□ -0.36
RTN4-202ENST00000337526 DAP3P51398 398 aaKnown RBP12.82□□□□□ -0.36
RTN4-202ENST00000337526 RAP2BP61225 183 aa12.82□□□□□ -0.36
RTN4-202ENST00000337526 S100A12P80511 92 aa12.82□□□□□ -0.36
RTN4-202ENST00000337526 LTBQ06643 244 aa12.82□□□□□ -0.36
RTN4-202ENST00000337526 GPR18Q14330 331 aa12.82□□□□□ -0.36
RTN4-202ENST00000337526 C18orf63Q68DL7 685 aa12.82□□□□□ -0.36
RTN4-202ENST00000337526 WBP2NLQ6ICG8 309 aa12.82□□□□□ -0.36
RTN4-202ENST00000337526 LCN10Q6JVE6 187 aa12.82□□□□□ -0.36
RTN4-202ENST00000337526 MBOAT2Q6ZWT7 520 aa12.82□□□□□ -0.36
RTN4-202ENST00000337526 ZNF611Q8N823 705 aa12.82□□□□□ -0.36
RTN4-202ENST00000337526 DUS3LQ96G46 650 aaKnown RBP12.82□□□□□ -0.36
RTN4-202ENST00000337526 AMDHD1Q96NU7 426 aa12.82□□□□□ -0.36
RTN4-202ENST00000337526 ZIC5Q96T25 663 aa12.82□□□□□ -0.36
RTN4-202ENST00000337526 ZFP57Q9NU63 452 aa12.82□□□□□ -0.36
RTN4-202ENST00000337526 DNMT3BQ9UBC3 853 aaKnown RBP12.82□□□□□ -0.36
RTN4-202ENST00000337526 ASB1Q9Y576 335 aa12.82□□□□□ -0.36
RTN4-202ENST00000337526 SYT5O00445 386 aa12.82□□□□□ -0.36
RTN4-202ENST00000337526 ZNF217O75362 1048 aa12.82□□□□□ -0.36
RTN4-202ENST00000337526 CLEC2LP0C7M8 214 aa12.82□□□□□ -0.36
RTN4-202ENST00000337526 GAAP10253 952 aa12.82□□□□□ -0.36
RTN4-202ENST00000337526 RAB3AP20336 220 aa12.82□□□□□ -0.36
RTN4-202ENST00000337526 CDK2P24941 298 aa12.82□□□□□ -0.36
RTN4-202ENST00000337526 AKR1C2P52895 323 aa12.82□□□□□ -0.36
RTN4-202ENST00000337526 SIRPAP78324 504 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms