RNA–Protein interactions for RNA: ENST00000335760.9

APOBEC3B-202, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3B, humanhuman

TSL 1 (best)

Gene APOBEC3B, Length 1,359 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3B-202ENST00000335760 PTGS2P35354 604 aa12.71□□□□□ -0.37
APOBEC3B-202ENST00000335760 RBPJQ06330 500 aa12.71□□□□□ -0.37
APOBEC3B-202ENST00000335760 IGFBP7Q16270 282 aa12.71□□□□□ -0.37
APOBEC3B-202ENST00000335760 CHERPQ8IWX8 916 aaKnown RBP12.71□□□□□ -0.37
APOBEC3B-202ENST00000335760 RNF217Q8TC41 542 aa12.71□□□□□ -0.37
APOBEC3B-202ENST00000335760 C3orf49Q96BT1 292 aa12.71□□□□□ -0.37
APOBEC3B-202ENST00000335760 TMEM185BQ9H7F4 350 aa12.71□□□□□ -0.37
APOBEC3B-202ENST00000335760 SELENONQ9NZV5 590 aa12.71□□□□□ -0.37
APOBEC3B-202ENST00000335760 OSGIN1Q9UJX0 560 aa12.71□□□□□ -0.37
APOBEC3B-202ENST00000335760 ACAD8Q9UKU7 415 aa12.71□□□□□ -0.37
APOBEC3B-202ENST00000335760 TMED7Q9Y3B3 224 aa12.71□□□□□ -0.37
APOBEC3B-202ENST00000335760 AP4B1Q9Y6B7 739 aa12.71□□□□□ -0.37
APOBEC3B-202ENST00000335760 KALRNO60229 2985 aa12.71□□□□□ -0.37
APOBEC3B-202ENST00000335760 ZNF407Q9C0G0 2248 aa12.7□□□□□ -0.38
APOBEC3B-202ENST00000335760 AQP12BA6NM10 295 aa12.7□□□□□ -0.38
APOBEC3B-202ENST00000335760 SEMG1P04279 462 aa12.7□□□□□ -0.38
APOBEC3B-202ENST00000335760 ABOP16442 354 aa12.7□□□□□ -0.38
APOBEC3B-202ENST00000335760 CXCR1P25024 350 aa12.7□□□□□ -0.38
APOBEC3B-202ENST00000335760 YAP1P46937 504 aaKnown RBP12.7□□□□□ -0.38
APOBEC3B-202ENST00000335760 LHX2P50458 406 aa12.7□□□□□ -0.38
APOBEC3B-202ENST00000335760 CDH12P55289 794 aa12.7□□□□□ -0.38
APOBEC3B-202ENST00000335760 TAS2R41P59536 307 aa12.7□□□□□ -0.38
APOBEC3B-202ENST00000335760 RAC1P63000 192 aa12.7□□□□□ -0.38
APOBEC3B-202ENST00000335760 SRYQ05066 204 aa12.7□□□□□ -0.38
APOBEC3B-202ENST00000335760 SELENBP1Q13228 472 aa12.7□□□□□ -0.38
APOBEC3B-202ENST00000335760 C3AR1Q16581 482 aa12.7□□□□□ -0.38
APOBEC3B-202ENST00000335760 ZNF800Q2TB10 664 aaPredicted RBP eCLIP12.7□□□□□ -0.38
APOBEC3B-202ENST00000335760 WLSQ5T9L3 541 aa12.7□□□□□ -0.38
APOBEC3B-202ENST00000335760 ULK3Q6PHR2 472 aa12.7□□□□□ -0.38
APOBEC3B-202ENST00000335760 ATG4DQ86TL0 474 aaPredicted RBP12.7□□□□□ -0.38
APOBEC3B-202ENST00000335760 TSPYL5Q86VY4 417 aaPredicted RBP12.7□□□□□ -0.38
APOBEC3B-202ENST00000335760 SPATA24Q86W54 205 aa12.7□□□□□ -0.38
APOBEC3B-202ENST00000335760 LSRQ86X29 649 aaPredicted RBP12.7□□□□□ -0.38
APOBEC3B-202ENST00000335760 ADGRG3Q86Y34 549 aa12.7□□□□□ -0.38
APOBEC3B-202ENST00000335760 AQP12AQ8IXF9 295 aa12.7□□□□□ -0.38
APOBEC3B-202ENST00000335760 UBQLNLQ8IYU4 475 aa12.7□□□□□ -0.38
APOBEC3B-202ENST00000335760 LILRA2Q8N149 483 aa12.7□□□□□ -0.38
APOBEC3B-202ENST00000335760 OR5M9Q8NGP3 310 aa12.7□□□□□ -0.38
APOBEC3B-202ENST00000335760 ADAMTS16Q8TE57 1224 aa12.7□□□□□ -0.38
APOBEC3B-202ENST00000335760 PHF10Q8WUB8 498 aaKnown RBP12.7□□□□□ -0.38
APOBEC3B-202ENST00000335760 RELTQ969Z4 430 aa12.7□□□□□ -0.38
APOBEC3B-202ENST00000335760 SLC47A1Q96FL8 570 aa12.7□□□□□ -0.38
APOBEC3B-202ENST00000335760 WDYHV1Q96HA8 205 aa12.7□□□□□ -0.38
APOBEC3B-202ENST00000335760 SEPHS2Q99611 448 aa12.7□□□□□ -0.38
APOBEC3B-202ENST00000335760 STOML1Q9UBI4 398 aa12.7□□□□□ -0.38
APOBEC3B-202ENST00000335760 A0A0B4J2E0 115 aa12.69□□□□□ -0.38
APOBEC3B-202ENST00000335760 A0A1B0GX12 115 aa12.69□□□□□ -0.38
APOBEC3B-202ENST00000335760 TMEM72A0PK05 275 aa12.69□□□□□ -0.38
APOBEC3B-202ENST00000335760 TRAPPC13A5PLN9 417 aa12.69□□□□□ -0.38
APOBEC3B-202ENST00000335760 ERICH4A6NGS2 130 aa12.69□□□□□ -0.38
APOBEC3B-202ENST00000335760 J3KTA2 159 aa12.69□□□□□ -0.38
APOBEC3B-202ENST00000335760 hCG_2039718K7EN88 272 aa12.69□□□□□ -0.38
APOBEC3B-202ENST00000335760 BCKDKO14874 412 aa12.69□□□□□ -0.38
APOBEC3B-202ENST00000335760 SEC14L5O43304 696 aa12.69□□□□□ -0.38
APOBEC3B-202ENST00000335760 SEMA7AO75326 666 aa12.69□□□□□ -0.38
APOBEC3B-202ENST00000335760 TPOP07202 933 aa12.69□□□□□ -0.38
APOBEC3B-202ENST00000335760 SFTPDP35247 375 aa12.69□□□□□ -0.38
APOBEC3B-202ENST00000335760 ERFP50548 548 aa12.69□□□□□ -0.38
APOBEC3B-202ENST00000335760 CLDN20P56880 219 aa12.69□□□□□ -0.38
APOBEC3B-202ENST00000335760 MRPL49Q13405 166 aaKnown RBP12.69□□□□□ -0.38
APOBEC3B-202ENST00000335760 PIN1Q13526 163 aaPredicted RBP12.69□□□□□ -0.38
APOBEC3B-202ENST00000335760 BCL2A1Q16548 175 aa12.69□□□□□ -0.38
APOBEC3B-202ENST00000335760 ALG10BQ5I7T1 473 aa12.69□□□□□ -0.38
APOBEC3B-202ENST00000335760 C1orf146Q5VVC0 180 aa12.69□□□□□ -0.38
APOBEC3B-202ENST00000335760 C3orf33Q6P1S2 294 aa12.69□□□□□ -0.38
APOBEC3B-202ENST00000335760 ZNF613Q6PF04 617 aa12.69□□□□□ -0.38
APOBEC3B-202ENST00000335760 DNAJA4Q8WW22 397 aaPredicted RBP12.69□□□□□ -0.38
APOBEC3B-202ENST00000335760 POP5Q969H6 163 aaKnown RBP12.69□□□□□ -0.38
APOBEC3B-202ENST00000335760 C7orf34Q96L11 122 aa12.69□□□□□ -0.38
APOBEC3B-202ENST00000335760 RAB3IPQ96QF0 476 aaPredicted RBP12.69□□□□□ -0.38
APOBEC3B-202ENST00000335760 POLR2J2Q9GZM3 115 aaKnown RBP12.69□□□□□ -0.38
APOBEC3B-202ENST00000335760 POLR2J3Q9H1A7 115 aaKnown RBP12.69□□□□□ -0.38
APOBEC3B-202ENST00000335760 PNPLA3Q9NST1 481 aa12.69□□□□□ -0.38
APOBEC3B-202ENST00000335760 CHRNA9Q9UGM1 479 aa12.69□□□□□ -0.38
APOBEC3B-202ENST00000335760 RIMS3Q9UJD0 308 aa12.69□□□□□ -0.38
APOBEC3B-202ENST00000335760 CAMK2AQ9UQM7 478 aa12.69□□□□□ -0.38
APOBEC3B-202ENST00000335760 ZNF835Q9Y2P0 537 aa12.69□□□□□ -0.38
APOBEC3B-202ENST00000335760 SPIN1Q9Y657 262 aaPredicted RBP12.69□□□□□ -0.38
APOBEC3B-202ENST00000335760 FAM208BQ5VWN6 2430 aa12.69□□□□□ -0.38
APOBEC3B-202ENST00000335760 ELOA3DA6NLF2 546 aaPredicted RBP12.69□□□□□ -0.38
APOBEC3B-202ENST00000335760 SLC19A2O60779 497 aa12.69□□□□□ -0.38
APOBEC3B-202ENST00000335760 OR5F1O95221 314 aa12.69□□□□□ -0.38
APOBEC3B-202ENST00000335760 THY1P04216 161 aa12.69□□□□□ -0.38
APOBEC3B-202ENST00000335760 PNMTP11086 282 aa12.69□□□□□ -0.38
APOBEC3B-202ENST00000335760 CPN1P15169 458 aa12.69□□□□□ -0.38
APOBEC3B-202ENST00000335760 NQO1P15559 274 aaKnown RBP12.69□□□□□ -0.38
APOBEC3B-202ENST00000335760 ZNF708P17019 499 aa12.69□□□□□ -0.38
APOBEC3B-202ENST00000335760 SHC1P29353 583 aa12.69□□□□□ -0.38
APOBEC3B-202ENST00000335760 SUCLG1P53597 346 aaKnown RBP12.69□□□□□ -0.38
APOBEC3B-202ENST00000335760 CLDN18P56856 261 aa12.69□□□□□ -0.38
APOBEC3B-202ENST00000335760 VLDLRP98155 873 aa12.69□□□□□ -0.38
APOBEC3B-202ENST00000335760 FOXD4Q12950 439 aaPredicted RBP12.69□□□□□ -0.38
APOBEC3B-202ENST00000335760 ELOA3BQ3SY89 546 aa12.69□□□□□ -0.38
APOBEC3B-202ENST00000335760 TMEM176BQ3YBM2 270 aaPredicted RBP12.69□□□□□ -0.38
APOBEC3B-202ENST00000335760 GXYLT1Q4G148 440 aa12.69□□□□□ -0.38
APOBEC3B-202ENST00000335760 FAM98BQ52LJ0 330 aaKnown RBP12.69□□□□□ -0.38
APOBEC3B-202ENST00000335760 GDF7Q7Z4P5 450 aa12.69□□□□□ -0.38
APOBEC3B-202ENST00000335760 TSEN54Q7Z6J9 526 aaKnown RBP12.69□□□□□ -0.38
APOBEC3B-202ENST00000335760 GGNQ86UU5 652 aa12.69□□□□□ -0.38
APOBEC3B-202ENST00000335760 CD163Q86VB7 1156 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms