RNA–Protein interactions for RNA: ENST00000334859.8

LRCH3-201, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene LRCH3, Length 2,258 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-201ENST00000334859 S1PR1P21453 382 aa16.32■□□□□ 0.2
LRCH3-201ENST00000334859 SLC2A5P22732 501 aa16.32■□□□□ 0.2
LRCH3-201ENST00000334859 ACVR1BP36896 505 aa16.32■□□□□ 0.2
LRCH3-201ENST00000334859 ACAA2P42765 397 aaKnown RBP16.32■□□□□ 0.2
LRCH3-201ENST00000334859 OR12D2P58182 307 aa16.32■□□□□ 0.2
LRCH3-201ENST00000334859 FZD2Q14332 565 aa16.32■□□□□ 0.2
LRCH3-201ENST00000334859 HBMQ6B0K9 141 aa16.32■□□□□ 0.2
LRCH3-201ENST00000334859 FAM98AQ8NCA5 519 aaKnown RBP16.32■□□□□ 0.2
LRCH3-201ENST00000334859 C17orf47Q8NEP4 570 aa16.32■□□□□ 0.2
LRCH3-201ENST00000334859 ZDHHC1Q8WTX9 485 aa16.32■□□□□ 0.2
LRCH3-201ENST00000334859 SLC7A6Q92536 515 aa16.32■□□□□ 0.2
LRCH3-201ENST00000334859 SLC35B4Q969S0 331 aa16.32■□□□□ 0.2
LRCH3-201ENST00000334859 TOE1Q96GM8 510 aaKnown RBP16.32■□□□□ 0.2
LRCH3-201ENST00000334859 ERMAPQ96PL5 475 aaPredicted RBP16.32■□□□□ 0.2
LRCH3-201ENST00000334859 SMAD5Q99717 465 aaKnown RBP16.32■□□□□ 0.2
LRCH3-201ENST00000334859 TMEM43Q9BTV4 400 aa16.32■□□□□ 0.2
LRCH3-201ENST00000334859 LMF2Q9BU23 707 aaKnown RBP16.32■□□□□ 0.2
LRCH3-201ENST00000334859 C8orf33Q9H7E9 229 aaPredicted RBP16.32■□□□□ 0.2
LRCH3-201ENST00000334859 RBFOX1Q9NWB1 397 aaKnown RBP16.32■□□□□ 0.2
LRCH3-201ENST00000334859 PCDHGB7Q9Y5F8 929 aa16.32■□□□□ 0.2
LRCH3-201ENST00000334859 FAM240BA0A1B0GVZ2 78 aa16.31■□□□□ 0.2
LRCH3-201ENST00000334859 SLC9B1P1A6NJY1 282 aa16.31■□□□□ 0.2
LRCH3-201ENST00000334859 TGFBR3LH3BV60 316 aa16.31■□□□□ 0.2
LRCH3-201ENST00000334859 LYRM1O43325 122 aa16.31■□□□□ 0.2
LRCH3-201ENST00000334859 TRAPPC2P0DI81 140 aa16.31■□□□□ 0.2
LRCH3-201ENST00000334859 TRAPPC2BP0DI82 140 aa16.31■□□□□ 0.2
LRCH3-201ENST00000334859 RNH1P13489 461 aaKnown RBP16.31■□□□□ 0.2
LRCH3-201ENST00000334859 RBM34P42696 430 aaKnown RBP16.31■□□□□ 0.2
LRCH3-201ENST00000334859 TAS2R43P59537 309 aa16.31■□□□□ 0.2
LRCH3-201ENST00000334859 MAT1AQ00266 395 aaKnown RBP16.31■□□□□ 0.2
LRCH3-201ENST00000334859 CCDC85BQ15834 202 aaPredicted RBP16.31■□□□□ 0.2
LRCH3-201ENST00000334859 ZNF57Q68EA5 555 aaPredicted RBP16.31■□□□□ 0.2
LRCH3-201ENST00000334859 FAAH2Q6GMR7 532 aa16.31■□□□□ 0.2
LRCH3-201ENST00000334859 KIRREL2Q6UWL6 708 aa16.31■□□□□ 0.2
LRCH3-201ENST00000334859 CEACAM19Q7Z692 300 aa16.31■□□□□ 0.2
LRCH3-201ENST00000334859 MCATQ8IVS2 390 aaKnown RBP16.31■□□□□ 0.2
LRCH3-201ENST00000334859 SLC44A3Q8N4M1 653 aa16.31■□□□□ 0.2
LRCH3-201ENST00000334859 SDR9C7Q8NEX9 313 aa16.31■□□□□ 0.2
LRCH3-201ENST00000334859 HOXB13Q92826 284 aaPredicted RBP16.31■□□□□ 0.2
LRCH3-201ENST00000334859 SPACA7Q96KW9 195 aa16.31■□□□□ 0.2
LRCH3-201ENST00000334859 VSTM2LQ96N03 204 aa16.31■□□□□ 0.2
LRCH3-201ENST00000334859 TTYH2Q9BSA4 534 aa16.31■□□□□ 0.2
LRCH3-201ENST00000334859 ZNF426Q9BUY5 554 aa16.31■□□□□ 0.2
LRCH3-201ENST00000334859 A0A0G2JMP0 313 aa16.31■□□□□ 0.2
LRCH3-201ENST00000334859 A0A0X1KG70 313 aa16.31■□□□□ 0.2
LRCH3-201ENST00000334859 OR2W5A6NFC9 320 aa16.31■□□□□ 0.2
LRCH3-201ENST00000334859 TCEA1P23193 301 aaKnown RBP16.31■□□□□ 0.2
LRCH3-201ENST00000334859 PTBP1P26599 531 aaKnown RBP eCLIP16.31■□□□□ 0.2
LRCH3-201ENST00000334859 PYCR1P32322 319 aa16.31■□□□□ 0.2
LRCH3-201ENST00000334859 PPM1FP49593 454 aaPredicted RBP16.31■□□□□ 0.2
LRCH3-201ENST00000334859 PGDP52209 483 aa16.31■□□□□ 0.2
LRCH3-201ENST00000334859 OR10A3P58181 314 aa16.31■□□□□ 0.2
LRCH3-201ENST00000334859 ACTC1P68032 377 aa16.31■□□□□ 0.2
LRCH3-201ENST00000334859 ACTA1P68133 377 aa16.31■□□□□ 0.2
LRCH3-201ENST00000334859 ZNF85Q03923 595 aa16.31■□□□□ 0.2
LRCH3-201ENST00000334859 ERV3-1Q14264 604 aa16.31■□□□□ 0.2
LRCH3-201ENST00000334859 ZNF267Q14586 743 aaPredicted RBP16.31■□□□□ 0.2
LRCH3-201ENST00000334859 NDUFAF6Q330K2 333 aa16.31■□□□□ 0.2
LRCH3-201ENST00000334859 VASH1Q7L8A9 365 aaPredicted RBP16.31■□□□□ 0.2
LRCH3-201ENST00000334859 GRAMD2AQ8IUY3 354 aa16.31■□□□□ 0.2
LRCH3-201ENST00000334859 RFLNBQ8N5W9 214 aa16.31■□□□□ 0.2
LRCH3-201ENST00000334859 OR4M2Q8NGB6 313 aa16.31■□□□□ 0.2
LRCH3-201ENST00000334859 OR52E2Q8NGJ4 325 aa16.31■□□□□ 0.2
LRCH3-201ENST00000334859 OR5J2Q8NH18 312 aa16.31■□□□□ 0.2
LRCH3-201ENST00000334859 OR4K13Q8NH42 304 aa16.31■□□□□ 0.2
LRCH3-201ENST00000334859 AHCYL2Q96HN2 611 aaKnown RBP16.31■□□□□ 0.2
LRCH3-201ENST00000334859 RANGRFQ9HD47 186 aaPredicted RBP16.31■□□□□ 0.2
LRCH3-201ENST00000334859 MRPS33Q9Y291 106 aaKnown RBP16.31■□□□□ 0.2
LRCH3-201ENST00000334859 CLCA3PQ9Y6N3 262 aa16.31■□□□□ 0.2
LRCH3-201ENST00000334859 A0A0C4DFX4 3053 aa16.31■□□□□ 0.2
LRCH3-201ENST00000334859 COL4A2P08572 1712 aa16.3■□□□□ 0.2
LRCH3-201ENST00000334859 PLPP2O43688 288 aa16.3■□□□□ 0.2
LRCH3-201ENST00000334859 TALDO1P37837 337 aa16.3■□□□□ 0.2
LRCH3-201ENST00000334859 KIAA0895LQ68EN5 471 aa16.3■□□□□ 0.2
LRCH3-201ENST00000334859 NPSR1Q6W5P4 371 aa16.3■□□□□ 0.2
LRCH3-201ENST00000334859 SSX6Q7RTT6 188 aa16.3■□□□□ 0.2
LRCH3-201ENST00000334859 SAMD12Q8N8I0 201 aa16.3■□□□□ 0.2
LRCH3-201ENST00000334859 DTX3Q8N9I9 347 aa16.3■□□□□ 0.2
LRCH3-201ENST00000334859 ZMYND19Q96E35 227 aaPredicted RBP16.3■□□□□ 0.2
LRCH3-201ENST00000334859 WACQ9BTA9 647 aa16.3■□□□□ 0.2
LRCH3-201ENST00000334859 GPR174Q9BXC1 333 aa16.3■□□□□ 0.2
LRCH3-201ENST00000334859 HDHD2Q9H0R4 259 aa16.3■□□□□ 0.2
LRCH3-201ENST00000334859 EVA1AQ9H8M9 152 aa16.3■□□□□ 0.2
LRCH3-201ENST00000334859 ERVMER34-1Q9H9K5 563 aa16.3■□□□□ 0.2
LRCH3-201ENST00000334859 ST6GALNAC1Q9NSC7 600 aaPredicted RBP16.3■□□□□ 0.2
LRCH3-201ENST00000334859 NLKQ9UBE8 527 aa16.3■□□□□ 0.2
LRCH3-201ENST00000334859 RASD1Q9Y272 281 aa16.3■□□□□ 0.2
LRCH3-201ENST00000334859 USP34Q70CQ2 3546 aa16.3■□□□□ 0.2
LRCH3-201ENST00000334859 CD83Q01151 205 aa16.3■□□□□ 0.2
LRCH3-201ENST00000334859 RIN1Q13671 783 aa16.3■□□□□ 0.2
LRCH3-201ENST00000334859 TATDN3Q17R31 274 aa16.3■□□□□ 0.2
LRCH3-201ENST00000334859 SFXN4Q6P4A7 337 aa16.3■□□□□ 0.2
LRCH3-201ENST00000334859 ULK3Q6PHR2 472 aa16.3■□□□□ 0.2
LRCH3-201ENST00000334859 ARL14Q8N4G2 192 aa16.3■□□□□ 0.2
LRCH3-201ENST00000334859 METTL27Q8N6F8 245 aaPredicted RBP16.3■□□□□ 0.2
LRCH3-201ENST00000334859 RCBTB1Q8NDN9 531 aa16.3■□□□□ 0.2
LRCH3-201ENST00000334859 OR51L1Q8NGJ5 315 aa16.3■□□□□ 0.2
LRCH3-201ENST00000334859 OR5M3Q8NGP4 307 aa16.3■□□□□ 0.2
LRCH3-201ENST00000334859 SNX18Q96RF0 628 aa16.3■□□□□ 0.2
LRCH3-201ENST00000334859 Q9N2J8 555 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 147.9 ms