RNA–Protein interactions for RNA: ENST00000333371.7

VPS33B-201, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS33B, Length 2,767 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-201ENST00000333371 NGFRP08138 427 aa11.38□□□□□ -0.59
VPS33B-201ENST00000333371 ADRB1P08588 477 aa11.38□□□□□ -0.59
VPS33B-201ENST00000333371 CPMP14384 443 aa11.38□□□□□ -0.59
VPS33B-201ENST00000333371 PVRP15151 417 aa11.38□□□□□ -0.59
VPS33B-201ENST00000333371 NAA10P41227 235 aaPredicted RBP11.38□□□□□ -0.59
VPS33B-201ENST00000333371 TBC1D3GQ6DHY5 549 aa11.38□□□□□ -0.59
VPS33B-201ENST00000333371 SIAH3Q8IW03 269 aa11.38□□□□□ -0.59
VPS33B-201ENST00000333371 SFTPA2Q8IWL1 248 aa11.38□□□□□ -0.59
VPS33B-201ENST00000333371 ZNF655Q8N720 491 aaPredicted RBP11.38□□□□□ -0.59
VPS33B-201ENST00000333371 COX18Q8N8Q8 333 aa11.38□□□□□ -0.59
VPS33B-201ENST00000333371 CNOT9Q92600 299 aaKnown RBP11.38□□□□□ -0.59
VPS33B-201ENST00000333371 DACT3Q96B18 629 aaPredicted RBP11.38□□□□□ -0.59
VPS33B-201ENST00000333371 APOOQ9BUR5 198 aa11.38□□□□□ -0.59
VPS33B-201ENST00000333371 ZNF350Q9GZX5 532 aa11.38□□□□□ -0.59
VPS33B-201ENST00000333371 ZFP64Q9NPA5 681 aa11.38□□□□□ -0.59
VPS33B-201ENST00000333371 CD93Q9NPY3 652 aa11.38□□□□□ -0.59
VPS33B-201ENST00000333371 TBC1D3DA0A087WVF3 549 aa11.38□□□□□ -0.59
VPS33B-201ENST00000333371 TBC1D3IA0A087WXS9 549 aa11.38□□□□□ -0.59
VPS33B-201ENST00000333371 TBC1D3EA0A087X179 549 aa11.38□□□□□ -0.59
VPS33B-201ENST00000333371 TBC1D3LB9A6J9 549 aa11.38□□□□□ -0.59
VPS33B-201ENST00000333371 TPD52L2O43399 206 aaKnown RBP11.38□□□□□ -0.59
VPS33B-201ENST00000333371 TBC1D3HP0C7X1 549 aa11.38□□□□□ -0.59
VPS33B-201ENST00000333371 NT5EP21589 574 aa11.38□□□□□ -0.59
VPS33B-201ENST00000333371 DRD5P21918 477 aa11.38□□□□□ -0.59
VPS33B-201ENST00000333371 RBMS1P29558 406 aaKnown RBP11.38□□□□□ -0.59
VPS33B-201ENST00000333371 NTSR1P30989 418 aa11.38□□□□□ -0.59
VPS33B-201ENST00000333371 KIR2DL1P43626 348 aaPredicted RBP11.38□□□□□ -0.59
VPS33B-201ENST00000333371 PPP2CBP62714 309 aa11.38□□□□□ -0.59
VPS33B-201ENST00000333371 PPP2CAP67775 309 aa11.38□□□□□ -0.59
VPS33B-201ENST00000333371 TBC1D3CQ6IPX1 549 aa11.38□□□□□ -0.59
VPS33B-201ENST00000333371 TBC1D3Q8IZP1 549 aaPredicted RBP11.38□□□□□ -0.59
VPS33B-201ENST00000333371 ZNF619Q8N2I2 560 aa11.38□□□□□ -0.59
VPS33B-201ENST00000333371 SLC44A3Q8N4M1 653 aa11.38□□□□□ -0.59
VPS33B-201ENST00000333371 SDR9C7Q8NEX9 313 aa11.38□□□□□ -0.59
VPS33B-201ENST00000333371 ZNRF4Q8WWF5 429 aa11.38□□□□□ -0.59
VPS33B-201ENST00000333371 YIPF5Q969M3 257 aa11.38□□□□□ -0.59
VPS33B-201ENST00000333371 TSACCQ96A04 125 aaPredicted RBP11.38□□□□□ -0.59
VPS33B-201ENST00000333371 SARGQ9BW04 601 aa11.38□□□□□ -0.59
VPS33B-201ENST00000333371 GSDMCQ9BYG8 508 aa11.38□□□□□ -0.59
VPS33B-201ENST00000333371 GHITMQ9H3K2 345 aa11.38□□□□□ -0.59
VPS33B-201ENST00000333371 AUNIPQ9H7T9 357 aa11.38□□□□□ -0.59
VPS33B-201ENST00000333371 STARD5Q9NSY2 213 aa11.38□□□□□ -0.59
VPS33B-201ENST00000333371 UCKL1Q9NWZ5 548 aa11.38□□□□□ -0.59
VPS33B-201ENST00000333371 DAPP1Q9UN19 280 aa11.38□□□□□ -0.59
VPS33B-201ENST00000333371 AK6Q9Y3D8 172 aaKnown RBP11.38□□□□□ -0.59
VPS33B-201ENST00000333371 A0A087WV48 116 aa11.37□□□□□ -0.59
VPS33B-201ENST00000333371 TEX13CA0A0J9YWL9 993 aa11.37□□□□□ -0.59
VPS33B-201ENST00000333371 A0A1W2PQ72 361 aa11.37□□□□□ -0.59
VPS33B-201ENST00000333371 FAM86C2PA6NEL3 165 aa11.37□□□□□ -0.59
VPS33B-201ENST00000333371 PSMD9O00233 223 aa11.37□□□□□ -0.59
VPS33B-201ENST00000333371 TFP02787 698 aa11.37□□□□□ -0.59
VPS33B-201ENST00000333371 TCRBP04435 133 aa11.37□□□□□ -0.59
VPS33B-201ENST00000333371 NID1P14543 1247 aa11.37□□□□□ -0.59
VPS33B-201ENST00000333371 HK1P19367 917 aa11.37□□□□□ -0.59
VPS33B-201ENST00000333371 POLR2CP19387 275 aaPredicted RBP11.37□□□□□ -0.59
VPS33B-201ENST00000333371 F8A1P23610 371 aa11.37□□□□□ -0.59
VPS33B-201ENST00000333371 ARFIP1P53367 373 aa11.37□□□□□ -0.59
VPS33B-201ENST00000333371 BDH1Q02338 343 aa11.37□□□□□ -0.59
VPS33B-201ENST00000333371 RGS1Q08116 209 aa11.37□□□□□ -0.59
VPS33B-201ENST00000333371 TMEM31Q5JXX7 168 aa11.37□□□□□ -0.59
VPS33B-201ENST00000333371 ELMOD2Q8IZ81 293 aa11.37□□□□□ -0.59
VPS33B-201ENST00000333371 ZNF687Q8N1G0 1237 aa11.37□□□□□ -0.59
VPS33B-201ENST00000333371 ZNF431Q8TF32 576 aaPredicted RBP11.37□□□□□ -0.59
VPS33B-201ENST00000333371 NKIRAS2Q9NYR9 191 aa11.37□□□□□ -0.59
VPS33B-201ENST00000333371 FLRT3Q9NZU0 649 aa11.37□□□□□ -0.59
VPS33B-201ENST00000333371 STX11O75558 287 aa11.37□□□□□ -0.59
VPS33B-201ENST00000333371 SLC35G6P0C7Q6 338 aa11.37□□□□□ -0.59
VPS33B-201ENST00000333371 PEPDP12955 493 aa11.37□□□□□ -0.59
VPS33B-201ENST00000333371 RAB3BP20337 219 aa11.37□□□□□ -0.59
VPS33B-201ENST00000333371 SLC2A5P22732 501 aa11.37□□□□□ -0.59
VPS33B-201ENST00000333371 SSTR2P30874 369 aa11.37□□□□□ -0.59
VPS33B-201ENST00000333371 BMP8BP34820 402 aa11.37□□□□□ -0.59
VPS33B-201ENST00000333371 GABRA3P34903 492 aa11.37□□□□□ -0.59
VPS33B-201ENST00000333371 GARNL3Q5VVW2 1013 aa11.37□□□□□ -0.59
VPS33B-201ENST00000333371 DGAT2L6Q6ZPD8 337 aa11.37□□□□□ -0.59
VPS33B-201ENST00000333371 CREB3L2Q70SY1 520 aa11.37□□□□□ -0.59
VPS33B-201ENST00000333371 BMP8AQ7Z5Y6 402 aa11.37□□□□□ -0.59
VPS33B-201ENST00000333371 OR4K13Q8NH42 304 aa11.37□□□□□ -0.59
VPS33B-201ENST00000333371 PATE1Q8WXA2 126 aa11.37□□□□□ -0.59
VPS33B-201ENST00000333371 THAP4Q8WY91 577 aa11.37□□□□□ -0.59
VPS33B-201ENST00000333371 OR1E3Q8WZA6 343 aa11.37□□□□□ -0.59
VPS33B-201ENST00000333371 HYLS1Q96M11 299 aa11.37□□□□□ -0.59
VPS33B-201ENST00000333371 OR2A5Q96R48 311 aa11.37□□□□□ -0.59
VPS33B-201ENST00000333371 PDCD1LG2Q9BQ51 273 aa11.37□□□□□ -0.59
VPS33B-201ENST00000333371 ZNF559Q9BR84 538 aa11.37□□□□□ -0.59
VPS33B-201ENST00000333371 SRMSQ9H3Y6 488 aa11.37□□□□□ -0.59
VPS33B-201ENST00000333371 PIGUQ9H490 435 aa11.37□□□□□ -0.59
VPS33B-201ENST00000333371 BRD7Q9NPI1 651 aa11.37□□□□□ -0.59
VPS33B-201ENST00000333371 TMEM5Q9Y2B1 443 aa11.37□□□□□ -0.59
VPS33B-201ENST00000333371 SLC22A31A6NKX4 558 aa11.36□□□□□ -0.59
VPS33B-201ENST00000333371 HOXB2P14652 356 aa11.36□□□□□ -0.59
VPS33B-201ENST00000333371 ENPP1P22413 925 aa11.36□□□□□ -0.59
VPS33B-201ENST00000333371 PSMB10P40306 273 aa11.36□□□□□ -0.59
VPS33B-201ENST00000333371 EMDP50402 254 aa11.36□□□□□ -0.59
VPS33B-201ENST00000333371 AMZ1Q400G9 498 aa11.36□□□□□ -0.59
VPS33B-201ENST00000333371 EIPR1Q53HC9 387 aa11.36□□□□□ -0.59
VPS33B-201ENST00000333371 FHL5Q5TD97 284 aa11.36□□□□□ -0.59
VPS33B-201ENST00000333371 PXKQ7Z7A4 578 aa11.36□□□□□ -0.59
VPS33B-201ENST00000333371 TOMM5Q8N4H5 51 aa11.36□□□□□ -0.59
VPS33B-201ENST00000333371 LRRC17Q8N6Y2 441 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms