RNA–Protein interactions for RNA: ENST00000332728.8

LYSMD4-201, Transcript of LysM domain containing 4, humanhuman

TSL 4 BASIC

Gene LYSMD4, Length 2,847 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4-201ENST00000332728 TDGQ13569 410 aa16.72■□□□□ 0.27
LYSMD4-201ENST00000332728 IDNKQ5T6J7 187 aa16.72■□□□□ 0.27
LYSMD4-201ENST00000332728 SYT13Q7L8C5 426 aa16.72■□□□□ 0.27
LYSMD4-201ENST00000332728 CLDN22Q8N7P3 220 aa16.72■□□□□ 0.27
LYSMD4-201ENST00000332728 OR6K6Q8NGW6 343 aa16.72■□□□□ 0.27
LYSMD4-201ENST00000332728 C4orf36Q96KX1 117 aa16.72■□□□□ 0.27
LYSMD4-201ENST00000332728 DEPDC7Q96QD5 511 aa16.72■□□□□ 0.27
LYSMD4-201ENST00000332728 TEAD3Q99594 435 aa16.72■□□□□ 0.27
LYSMD4-201ENST00000332728 PRRG3Q9BZD7 231 aa16.72■□□□□ 0.27
LYSMD4-201ENST00000332728 CLDN16Q9Y5I7 305 aa16.72■□□□□ 0.27
LYSMD4-201ENST00000332728 IDSB3KWA1 339 aa16.71■□□□□ 0.27
LYSMD4-201ENST00000332728 RPS4Y1P22090 263 aaKnown RBP16.71■□□□□ 0.27
LYSMD4-201ENST00000332728 PSMB10P40306 273 aa16.71■□□□□ 0.27
LYSMD4-201ENST00000332728 CCR5P51681 352 aa16.71■□□□□ 0.27
LYSMD4-201ENST00000332728 ZP2Q05996 745 aa16.71■□□□□ 0.27
LYSMD4-201ENST00000332728 ELOCQ15369 112 aa16.71■□□□□ 0.27
LYSMD4-201ENST00000332728 PRTGQ2VWP7 1150 aa16.71■□□□□ 0.27
LYSMD4-201ENST00000332728 MEPCEQ7L2J0 689 aaKnown RBP16.71■□□□□ 0.27
LYSMD4-201ENST00000332728 NR2C2APQ86WQ0 139 aa16.71■□□□□ 0.27
LYSMD4-201ENST00000332728 SIX5Q8N196 739 aa16.71■□□□□ 0.27
LYSMD4-201ENST00000332728 ADOQ96SZ5 270 aa16.71■□□□□ 0.27
LYSMD4-201ENST00000332728 NMNAT3Q96T66 252 aa16.71■□□□□ 0.27
LYSMD4-201ENST00000332728 A0A0B4J2E0 115 aa16.71■□□□□ 0.27
LYSMD4-201ENST00000332728 A0A1B0GX12 115 aa16.71■□□□□ 0.27
LYSMD4-201ENST00000332728 TMEM129A0AVI4 362 aa16.71■□□□□ 0.27
LYSMD4-201ENST00000332728 C2orf72A6NCS6 295 aa16.71■□□□□ 0.27
LYSMD4-201ENST00000332728 PAHP00439 452 aa16.71■□□□□ 0.27
LYSMD4-201ENST00000332728 PYCR1P32322 319 aa16.71■□□□□ 0.27
LYSMD4-201ENST00000332728 ARL4DP49703 201 aa16.71■□□□□ 0.27
LYSMD4-201ENST00000332728 EFNA3P52797 238 aa16.71■□□□□ 0.27
LYSMD4-201ENST00000332728 RAB25P57735 213 aa16.71■□□□□ 0.27
LYSMD4-201ENST00000332728 DMWDQ09019 674 aa16.71■□□□□ 0.27
LYSMD4-201ENST00000332728 ZNF362Q5T0B9 420 aaPredicted RBP16.71■□□□□ 0.27
LYSMD4-201ENST00000332728 OR5M10Q6IEU7 315 aa16.71■□□□□ 0.27
LYSMD4-201ENST00000332728 MTFR2Q6P444 385 aa16.71■□□□□ 0.27
LYSMD4-201ENST00000332728 APOOLQ6UXV4 268 aa16.71■□□□□ 0.27
LYSMD4-201ENST00000332728 QSOX2Q6ZRP7 698 aa16.71■□□□□ 0.27
LYSMD4-201ENST00000332728 MED25Q71SY5 747 aa16.71■□□□□ 0.27
LYSMD4-201ENST00000332728 ACBD7Q8N6N7 88 aa16.71■□□□□ 0.27
LYSMD4-201ENST00000332728 OR5J2Q8NH18 312 aa16.71■□□□□ 0.27
LYSMD4-201ENST00000332728 STACQ99469 402 aa16.71■□□□□ 0.27
LYSMD4-201ENST00000332728 RTN4RQ9BZR6 473 aa16.71■□□□□ 0.27
LYSMD4-201ENST00000332728 MCCC2Q9HCC0 563 aa16.71■□□□□ 0.27
LYSMD4-201ENST00000332728 NCOR1O75376 2440 aa16.71■□□□□ 0.26
LYSMD4-201ENST00000332728 CLDN4O14493 209 aa16.7■□□□□ 0.26
LYSMD4-201ENST00000332728 IL7P13232 177 aa16.7■□□□□ 0.26
LYSMD4-201ENST00000332728 HPGDP15428 266 aa16.7■□□□□ 0.26
LYSMD4-201ENST00000332728 SELENBP1Q13228 472 aa16.7■□□□□ 0.26
LYSMD4-201ENST00000332728 AGAP7PQ5VUJ5 663 aa16.7■□□□□ 0.26
LYSMD4-201ENST00000332728 MRGPREQ86SM8 312 aa16.7■□□□□ 0.26
LYSMD4-201ENST00000332728 SENP5Q96HI0 755 aaPredicted RBP16.7■□□□□ 0.26
LYSMD4-201ENST00000332728 Q9N2J8 555 aa16.7■□□□□ 0.26
LYSMD4-201ENST00000332728 RNF215Q9Y6U7 377 aa16.7■□□□□ 0.26
LYSMD4-201ENST00000332728 FAM86C2PA6NEL3 165 aa16.7■□□□□ 0.26
LYSMD4-201ENST00000332728 OR2B3O76000 313 aa16.7■□□□□ 0.26
LYSMD4-201ENST00000332728 HMGN1P05114 100 aa16.7■□□□□ 0.26
LYSMD4-201ENST00000332728 F13BP05160 661 aa16.7■□□□□ 0.26
LYSMD4-201ENST00000332728 SLC2A2P11168 524 aaPredicted RBP16.7■□□□□ 0.26
LYSMD4-201ENST00000332728 SRFP11831 508 aa16.7■□□□□ 0.26
LYSMD4-201ENST00000332728 CTBP2P56545 445 aa16.7■□□□□ 0.26
LYSMD4-201ENST00000332728 FAM69BQ5VUD6 431 aa16.7■□□□□ 0.26
LYSMD4-201ENST00000332728 TMEM91Q6ZNR0 172 aa16.7■□□□□ 0.26
LYSMD4-201ENST00000332728 ARHGEF39Q8N4T4 335 aa16.7■□□□□ 0.26
LYSMD4-201ENST00000332728 KISS1RQ969F8 398 aaPredicted RBP16.7■□□□□ 0.26
LYSMD4-201ENST00000332728 TIMP4Q99727 224 aa16.7■□□□□ 0.26
LYSMD4-201ENST00000332728 NXF5Q9H1B4 397 aaKnown RBP16.7■□□□□ 0.26
LYSMD4-201ENST00000332728 UBE2ZQ9H832 354 aaPredicted RBP16.7■□□□□ 0.26
LYSMD4-201ENST00000332728 PI4KAP42356 2102 aa16.7■□□□□ 0.26
LYSMD4-201ENST00000332728 URB1O60287 2271 aaKnown RBP16.7■□□□□ 0.26
LYSMD4-201ENST00000332728 SAGE2PA6NJ88 616 aa16.69■□□□□ 0.26
LYSMD4-201ENST00000332728 RIIAD1A6NNX1 92 aa16.69■□□□□ 0.26
LYSMD4-201ENST00000332728 CTNSO60931 367 aa16.69■□□□□ 0.26
LYSMD4-201ENST00000332728 MAP3K8P41279 467 aa16.69■□□□□ 0.26
LYSMD4-201ENST00000332728 ZNF485Q8NCK3 441 aa16.69■□□□□ 0.26
LYSMD4-201ENST00000332728 MOSPD2Q8NHP6 518 aa16.69■□□□□ 0.26
LYSMD4-201ENST00000332728 PDE7BQ9NP56 450 aa16.69■□□□□ 0.26
LYSMD4-201ENST00000332728 KRCC1Q9NPI7 259 aaPredicted RBP16.69■□□□□ 0.26
LYSMD4-201ENST00000332728 GSTK1Q9Y2Q3 226 aa16.69■□□□□ 0.26
LYSMD4-201ENST00000332728 GPANK1O95872 356 aa16.69■□□□□ 0.26
LYSMD4-201ENST00000332728 ENDOUP21128 410 aaKnown RBP16.69■□□□□ 0.26
LYSMD4-201ENST00000332728 DRD5P21918 477 aa16.69■□□□□ 0.26
LYSMD4-201ENST00000332728 GABRA5P31644 462 aa16.69■□□□□ 0.26
LYSMD4-201ENST00000332728 TPBGQ13641 420 aa16.69■□□□□ 0.26
LYSMD4-201ENST00000332728 IL18Q14116 193 aa16.69■□□□□ 0.26
LYSMD4-201ENST00000332728 ODF4Q2M2E3 257 aa16.69■□□□□ 0.26
LYSMD4-201ENST00000332728 SLC25A30Q5SVS4 291 aa16.69■□□□□ 0.26
LYSMD4-201ENST00000332728 CNIH2Q6PI25 160 aa16.69■□□□□ 0.26
LYSMD4-201ENST00000332728 SMPDL3BQ92485 455 aa16.69■□□□□ 0.26
LYSMD4-201ENST00000332728 ATXN7L1Q9ULK2 861 aaPredicted RBP16.69■□□□□ 0.26
LYSMD4-201ENST00000332728 SATB2Q9UPW6 733 aa16.69■□□□□ 0.26
LYSMD4-201ENST00000332728 MRPS33Q9Y291 106 aaKnown RBP16.69■□□□□ 0.26
LYSMD4-201ENST00000332728 ANKRD61A6NGH8 418 aa16.69■□□□□ 0.26
LYSMD4-201ENST00000332728 FAM25AB3EWG3 89 aa16.69■□□□□ 0.26
LYSMD4-201ENST00000332728 FAM25CB3EWG5 89 aa16.69■□□□□ 0.26
LYSMD4-201ENST00000332728 FAM25GB3EWG6 89 aa16.69■□□□□ 0.26
LYSMD4-201ENST00000332728 COQ9O75208 318 aa16.69■□□□□ 0.26
LYSMD4-201ENST00000332728 NUDT14O95848 222 aa16.69■□□□□ 0.26
LYSMD4-201ENST00000332728 GPR3P46089 330 aa16.69■□□□□ 0.26
LYSMD4-201ENST00000332728 PHF7Q9BWX1 381 aaPredicted RBP16.69■□□□□ 0.26
LYSMD4-201ENST00000332728 ANKRD19PQ9H560 264 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms