RNA–Protein interactions for RNA: ENST00000331456.6

TRAIP-201, Transcript of TRAF interacting protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAIP, Length 2,028 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIP-201ENST00000331456 SLC23A3Q6PIS1 610 aa12.81□□□□□ -0.36
TRAIP-201ENST00000331456 THSD4Q6ZMP0 1018 aa12.81□□□□□ -0.36
TRAIP-201ENST00000331456 SHISA6Q6ZSJ9 500 aa12.81□□□□□ -0.36
TRAIP-201ENST00000331456 MEPCEQ7L2J0 689 aaKnown RBP12.81□□□□□ -0.36
TRAIP-201ENST00000331456 DTWD2Q8NBA8 298 aa12.81□□□□□ -0.36
TRAIP-201ENST00000331456 BBS1Q8NFJ9 593 aa12.81□□□□□ -0.36
TRAIP-201ENST00000331456 OR2I1PQ8NGU4 316 aa12.81□□□□□ -0.36
TRAIP-201ENST00000331456 PHOX2BQ99453 314 aa12.81□□□□□ -0.36
TRAIP-201ENST00000331456 WDR12Q9GZL7 423 aaKnown RBP12.81□□□□□ -0.36
TRAIP-201ENST00000331456 NRSN2Q9GZP1 204 aa12.81□□□□□ -0.36
TRAIP-201ENST00000331456 ENKD1Q9H0I2 346 aa12.81□□□□□ -0.36
TRAIP-201ENST00000331456 PI4KAP42356 2102 aa12.81□□□□□ -0.36
TRAIP-201ENST00000331456 A0A1W2PQD3 144 aa12.81□□□□□ -0.36
TRAIP-201ENST00000331456 CLDN25C9JDP6 229 aa12.81□□□□□ -0.36
TRAIP-201ENST00000331456 TSPAN2O60636 221 aa12.81□□□□□ -0.36
TRAIP-201ENST00000331456 NDUFB2O95178 105 aa12.81□□□□□ -0.36
TRAIP-201ENST00000331456 TSPAN19P0C672 248 aa12.81□□□□□ -0.36
TRAIP-201ENST00000331456 ZNF3P17036 446 aa12.81□□□□□ -0.36
TRAIP-201ENST00000331456 PNLIPRP2P54317 469 aa12.81□□□□□ -0.36
TRAIP-201ENST00000331456 NIPAL3Q6P499 406 aa12.81□□□□□ -0.36
TRAIP-201ENST00000331456 ANKRD37Q7Z713 158 aa12.81□□□□□ -0.36
TRAIP-201ENST00000331456 SLC38A9Q8NBW4 561 aa12.81□□□□□ -0.36
TRAIP-201ENST00000331456 MCFD2Q8NI22 146 aa12.81□□□□□ -0.36
TRAIP-201ENST00000331456 NACC2Q96BF6 587 aa12.81□□□□□ -0.36
TRAIP-201ENST00000331456 OMA1Q96E52 524 aa12.81□□□□□ -0.36
TRAIP-201ENST00000331456 RNF31Q96EP0 1072 aa12.81□□□□□ -0.36
TRAIP-201ENST00000331456 SH3YL1Q96HL8 342 aaPredicted RBP12.81□□□□□ -0.36
TRAIP-201ENST00000331456 GTPBP2Q9BX10 602 aaKnown RBP12.81□□□□□ -0.36
TRAIP-201ENST00000331456 MCCC2Q9HCC0 563 aa12.81□□□□□ -0.36
TRAIP-201ENST00000331456 PALMDQ9NP74 551 aa12.81□□□□□ -0.36
TRAIP-201ENST00000331456 NDUFB11Q9NX14 153 aa12.81□□□□□ -0.36
TRAIP-201ENST00000331456 CCDC59Q9P031 241 aaKnown RBP12.81□□□□□ -0.36
TRAIP-201ENST00000331456 TNFRSF10DQ9UBN6 386 aa12.81□□□□□ -0.36
TRAIP-201ENST00000331456 ZNF337Q9Y3M9 751 aa12.81□□□□□ -0.36
TRAIP-201ENST00000331456 CDC14CA4D256 554 aa12.8□□□□□ -0.36
TRAIP-201ENST00000331456 FAM183AA6NL82 134 aa12.8□□□□□ -0.36
TRAIP-201ENST00000331456 IDSB3KWA1 339 aa12.8□□□□□ -0.36
TRAIP-201ENST00000331456 SOCS6O14544 535 aa12.8□□□□□ -0.36
TRAIP-201ENST00000331456 ALOX12BO75342 701 aa12.8□□□□□ -0.36
TRAIP-201ENST00000331456 TIAF1O95411 115 aa12.8□□□□□ -0.36
TRAIP-201ENST00000331456 PPP1R3DO95685 299 aa12.8□□□□□ -0.36
TRAIP-201ENST00000331456 ONECUT2O95948 504 aa12.8□□□□□ -0.36
TRAIP-201ENST00000331456 PEPDP12955 493 aa12.8□□□□□ -0.36
TRAIP-201ENST00000331456 OPRL1P41146 370 aa12.8□□□□□ -0.36
TRAIP-201ENST00000331456 SLC1A3P43003 542 aa12.8□□□□□ -0.36
TRAIP-201ENST00000331456 NRG3P56975 720 aa12.8□□□□□ -0.36
TRAIP-201ENST00000331456 C16orf87Q6PH81 154 aa12.8□□□□□ -0.36
TRAIP-201ENST00000331456 APOOLQ6UXV4 268 aa12.8□□□□□ -0.36
TRAIP-201ENST00000331456 SHFQ7M4L6 423 aa12.8□□□□□ -0.36
TRAIP-201ENST00000331456 OVCH1Q7RTY7 1134 aa12.8□□□□□ -0.36
TRAIP-201ENST00000331456 SLC15A4Q8N697 577 aa12.8□□□□□ -0.36
TRAIP-201ENST00000331456 ZNF441Q8N8Z8 693 aa12.8□□□□□ -0.36
TRAIP-201ENST00000331456 ZNF563Q8TA94 476 aa12.8□□□□□ -0.36
TRAIP-201ENST00000331456 TP53INP1Q96A56 240 aa12.8□□□□□ -0.36
TRAIP-201ENST00000331456 CENPOQ9BU64 300 aa12.8□□□□□ -0.36
TRAIP-201ENST00000331456 TBL1XR1Q9BZK7 514 aa12.8□□□□□ -0.36
TRAIP-201ENST00000331456 SLIRPQ9GZT3 109 aaKnown RBP12.8□□□□□ -0.36
TRAIP-201ENST00000331456 MMP27Q9H306 513 aa12.8□□□□□ -0.36
TRAIP-201ENST00000331456 EXOSC4Q9NPD3 245 aaKnown RBP12.8□□□□□ -0.36
TRAIP-201ENST00000331456 FBXO8Q9NRD0 319 aa12.8□□□□□ -0.36
TRAIP-201ENST00000331456 STUB1Q9UNE7 303 aa12.8□□□□□ -0.36
TRAIP-201ENST00000331456 A3GALT2U3KPV4 340 aa12.8□□□□□ -0.36
TRAIP-201ENST00000331456 TMEM221A6NGB7 291 aa12.79□□□□□ -0.36
TRAIP-201ENST00000331456 SAGE2PA6NJ88 616 aa12.79□□□□□ -0.36
TRAIP-201ENST00000331456 SLC22A31A6NKX4 558 aa12.79□□□□□ -0.36
TRAIP-201ENST00000331456 M0R296 226 aa12.79□□□□□ -0.36
TRAIP-201ENST00000331456 OIP5O43482 229 aa12.79□□□□□ -0.36
TRAIP-201ENST00000331456 NDUFB5O43674 189 aa12.79□□□□□ -0.36
TRAIP-201ENST00000331456 EIF4E2O60573 245 aaKnown RBP12.79□□□□□ -0.36
TRAIP-201ENST00000331456 OR7A10O76100 309 aa12.79□□□□□ -0.36
TRAIP-201ENST00000331456 IGF2P01344 180 aa12.79□□□□□ -0.36
TRAIP-201ENST00000331456 IGHA1P01876 353 aa12.79□□□□□ -0.36
TRAIP-201ENST00000331456 CPEP16870 476 aa12.79□□□□□ -0.36
TRAIP-201ENST00000331456 SOX6P35712 828 aa12.79□□□□□ -0.36
TRAIP-201ENST00000331456 LIMK1P53667 647 aa12.79□□□□□ -0.36
TRAIP-201ENST00000331456 EMP2P54851 167 aa12.79□□□□□ -0.36
TRAIP-201ENST00000331456 RPS3AP61247 264 aaKnown RBP12.79□□□□□ -0.36
TRAIP-201ENST00000331456 TRA2AQ13595 282 aaKnown RBP eCLIP12.79□□□□□ -0.36
TRAIP-201ENST00000331456 ZNF404Q494X3 552 aa12.79□□□□□ -0.36
TRAIP-201ENST00000331456 PRR23CQ6ZRP0 262 aa12.79□□□□□ -0.36
TRAIP-201ENST00000331456 ATG4DQ86TL0 474 aaPredicted RBP12.79□□□□□ -0.36
TRAIP-201ENST00000331456 KLHL36Q8N4N3 616 aa12.79□□□□□ -0.36
TRAIP-201ENST00000331456 TMEM105Q8N8V8 129 aa12.79□□□□□ -0.36
TRAIP-201ENST00000331456 OR4F15Q8NGB8 312 aa12.79□□□□□ -0.36
TRAIP-201ENST00000331456 OR6Q1Q8NGQ2 317 aa12.79□□□□□ -0.36
TRAIP-201ENST00000331456 LRFN5Q96NI6 719 aa12.79□□□□□ -0.36
TRAIP-201ENST00000331456 TMEM43Q9BTV4 400 aa12.79□□□□□ -0.36
TRAIP-201ENST00000331456 JAM3Q9BX67 310 aa12.79□□□□□ -0.36
TRAIP-201ENST00000331456 KLHL21Q9UJP4 597 aa12.79□□□□□ -0.36
TRAIP-201ENST00000331456 SSR3Q9UNL2 185 aa12.79□□□□□ -0.36
TRAIP-201ENST00000331456 SPIN1Q9Y657 262 aaPredicted RBP12.79□□□□□ -0.36
TRAIP-201ENST00000331456 PMF1-BGLAPU3KQ54 211 aa12.79□□□□□ -0.36
TRAIP-201ENST00000331456 ALG1L2C9J202 215 aa12.79□□□□□ -0.36
TRAIP-201ENST00000331456 GPX5O75715 221 aa12.79□□□□□ -0.36
TRAIP-201ENST00000331456 LIMS3P0CW19 117 aa12.79□□□□□ -0.36
TRAIP-201ENST00000331456 LIMS4P0CW20 117 aa12.79□□□□□ -0.36
TRAIP-201ENST00000331456 ABCD3P28288 659 aa12.79□□□□□ -0.36
TRAIP-201ENST00000331456 GRK6P43250 576 aa12.79□□□□□ -0.36
TRAIP-201ENST00000331456 RPS7P62081 194 aaKnown RBP12.79□□□□□ -0.36
TRAIP-201ENST00000331456 RNF4P78317 190 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms