RNA–Protein interactions for RNA: ENST00000329399.6

PDLIM1-201, Transcript of PDZ and LIM domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM1, Length 1,452 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-201ENST00000329399 RIBC2Q9H4K1 309 aa15.01□□□□□ -0.01
PDLIM1-201ENST00000329399 TMEM27Q9HBJ8 222 aa15.01□□□□□ -0.01
PDLIM1-201ENST00000329399 CHST2Q9Y4C5 530 aa15.01□□□□□ -0.01
PDLIM1-201ENST00000329399 A0A087WXM4 84 aa15□□□□□ -0.01
PDLIM1-201ENST00000329399 TRBV4-1A0A0J9YWV2 114 aa15□□□□□ -0.01
PDLIM1-201ENST00000329399 OR10H3O60404 316 aa15□□□□□ -0.01
PDLIM1-201ENST00000329399 ABCB7O75027 752 aa15□□□□□ -0.01
PDLIM1-201ENST00000329399 SEMA7AO75326 666 aa15□□□□□ -0.01
PDLIM1-201ENST00000329399 SP1P08047 785 aa15□□□□□ -0.01
PDLIM1-201ENST00000329399 NAGAP17050 411 aa15□□□□□ -0.01
PDLIM1-201ENST00000329399 PNLIPRP2P54317 469 aa15□□□□□ -0.01
PDLIM1-201ENST00000329399 NRG3P56975 720 aa15□□□□□ -0.01
PDLIM1-201ENST00000329399 RPP38P78345 283 aaKnown RBP15□□□□□ -0.01
PDLIM1-201ENST00000329399 EBPQ15125 230 aaKnown RBP15□□□□□ -0.01
PDLIM1-201ENST00000329399 MAPK14Q16539 360 aa15□□□□□ -0.01
PDLIM1-201ENST00000329399 RNFT1Q5M7Z0 435 aa15□□□□□ -0.01
PDLIM1-201ENST00000329399 SLC34A3Q8N130 599 aa15□□□□□ -0.01
PDLIM1-201ENST00000329399 LSMEM1Q8N8F7 131 aa15□□□□□ -0.01
PDLIM1-201ENST00000329399 AQP11Q8NBQ7 271 aa15□□□□□ -0.01
PDLIM1-201ENST00000329399 GALNT11Q8NCW6 608 aa15□□□□□ -0.01
PDLIM1-201ENST00000329399 GNPDA2Q8TDQ7 276 aa15□□□□□ -0.01
PDLIM1-201ENST00000329399 FAR1Q8WVX9 515 aa15□□□□□ -0.01
PDLIM1-201ENST00000329399 ZNF566Q969W8 418 aa15□□□□□ -0.01
PDLIM1-201ENST00000329399 SCMH1Q96GD3 660 aa15□□□□□ -0.01
PDLIM1-201ENST00000329399 MPP4Q96JB8 637 aa15□□□□□ -0.01
PDLIM1-201ENST00000329399 RASL10BQ96S79 203 aa15□□□□□ -0.01
PDLIM1-201ENST00000329399 WWTR1Q9GZV5 400 aa15□□□□□ -0.01
PDLIM1-201ENST00000329399 EXOSC3Q9NQT5 275 aaKnown RBP15□□□□□ -0.01
PDLIM1-201ENST00000329399 NBPF19A0A087WUL8 3843 aa14.99□□□□□ -0.01
PDLIM1-201ENST00000329399 A0A1W2PQD3 144 aa14.99□□□□□ -0.01
PDLIM1-201ENST00000329399 MRPS14O60783 128 aaKnown RBP14.99□□□□□ -0.01
PDLIM1-201ENST00000329399 CLPTM1O96005 669 aa14.99□□□□□ -0.01
PDLIM1-201ENST00000329399 CCDC159P0C7I6 412 aa14.99□□□□□ -0.01
PDLIM1-201ENST00000329399 OSMP13725 252 aa14.99□□□□□ -0.01
PDLIM1-201ENST00000329399 HPGDP15428 266 aa14.99□□□□□ -0.01
PDLIM1-201ENST00000329399 TBXA2RP21731 343 aa14.99□□□□□ -0.01
PDLIM1-201ENST00000329399 SOX3P41225 446 aa14.99□□□□□ -0.01
PDLIM1-201ENST00000329399 NR0B1P51843 470 aaKnown RBP14.99□□□□□ -0.01
PDLIM1-201ENST00000329399 ZNF136P52737 540 aa14.99□□□□□ -0.01
PDLIM1-201ENST00000329399 GABARAPL2P60520 117 aa14.99□□□□□ -0.01
PDLIM1-201ENST00000329399 ISL1P61371 349 aa14.99□□□□□ -0.01
PDLIM1-201ENST00000329399 LAPTM4AQ15012 233 aa14.99□□□□□ -0.01
PDLIM1-201ENST00000329399 KLHL26Q53HC5 615 aa14.99□□□□□ -0.01
PDLIM1-201ENST00000329399 PDZK1Q5T2W1 519 aa14.99□□□□□ -0.01
PDLIM1-201ENST00000329399 PODNL1Q6PEZ8 512 aa14.99□□□□□ -0.01
PDLIM1-201ENST00000329399 EML6Q6ZMW3 1958 aa14.99□□□□□ -0.01
PDLIM1-201ENST00000329399 OLIG3Q7RTU3 272 aa14.99□□□□□ -0.01
PDLIM1-201ENST00000329399 GALNTL5Q7Z4T8 443 aa14.99□□□□□ -0.01
PDLIM1-201ENST00000329399 COMTD1Q86VU5 262 aa14.99□□□□□ -0.01
PDLIM1-201ENST00000329399 ZNF786Q8N393 782 aa14.99□□□□□ -0.01
PDLIM1-201ENST00000329399 ZNF441Q8N8Z8 693 aa14.99□□□□□ -0.01
PDLIM1-201ENST00000329399 TSPAN14Q8NG11 270 aa14.99□□□□□ -0.01
PDLIM1-201ENST00000329399 ADAMTS16Q8TE57 1224 aa14.99□□□□□ -0.01
PDLIM1-201ENST00000329399 SLC41A3Q96GZ6 507 aa14.99□□□□□ -0.01
PDLIM1-201ENST00000329399 MAN2C1Q9NTJ4 1040 aa14.99□□□□□ -0.01
PDLIM1-201ENST00000329399 KCNE5Q9UJ90 142 aa14.99□□□□□ -0.01
PDLIM1-201ENST00000329399 DTX4Q9Y2E6 619 aa14.99□□□□□ -0.01
PDLIM1-201ENST00000329399 YARS2Q9Y2Z4 477 aaKnown RBP14.99□□□□□ -0.01
PDLIM1-201ENST00000329399 A0A0G2JMM0 328 aa14.98□□□□□ -0.01
PDLIM1-201ENST00000329399 A0A1W2PPB8 328 aa14.98□□□□□ -0.01
PDLIM1-201ENST00000329399 A0A1W2PRS3 328 aa14.98□□□□□ -0.01
PDLIM1-201ENST00000329399 SERINC4A6NH21 518 aa14.98□□□□□ -0.01
PDLIM1-201ENST00000329399 KIR3DP1A8MWS1 328 aa14.98□□□□□ -0.01
PDLIM1-201ENST00000329399 SCDO00767 359 aa14.98□□□□□ -0.01
PDLIM1-201ENST00000329399 ZNHIT1O43257 154 aa14.98□□□□□ -0.01
PDLIM1-201ENST00000329399 SLC25A12O75746 678 aa14.98□□□□□ -0.01
PDLIM1-201ENST00000329399 NADKO95544 446 aaPredicted RBP14.98□□□□□ -0.01
PDLIM1-201ENST00000329399 GASTP01350 101 aa14.98□□□□□ -0.01
PDLIM1-201ENST00000329399 IGKV1D-16P01601 117 aa14.98□□□□□ -0.01
PDLIM1-201ENST00000329399 GGT2P36268 569 aa14.98□□□□□ -0.01
PDLIM1-201ENST00000329399 RPL5P46777 297 aaKnown RBP14.98□□□□□ -0.01
PDLIM1-201ENST00000329399 CYB561P49447 251 aa14.98□□□□□ -0.01
PDLIM1-201ENST00000329399 IL1RL1Q01638 556 aa14.98□□□□□ -0.01
PDLIM1-201ENST00000329399 SLC25A25Q6KCM7 469 aa14.98□□□□□ -0.01
PDLIM1-201ENST00000329399 PGBD2Q6P3X8 592 aa14.98□□□□□ -0.01
PDLIM1-201ENST00000329399 LYPD8Q6UX82 237 aa14.98□□□□□ -0.01
PDLIM1-201ENST00000329399 IL20RBQ6UXL0 311 aa14.98□□□□□ -0.01
PDLIM1-201ENST00000329399 PNPLA5Q7Z6Z6 429 aaPredicted RBP14.98□□□□□ -0.01
PDLIM1-201ENST00000329399 GALNT5Q7Z7M9 940 aa14.98□□□□□ -0.01
PDLIM1-201ENST00000329399 OR4K5Q8NGD3 323 aa14.98□□□□□ -0.01
PDLIM1-201ENST00000329399 PIGXQ8TBF5 258 aa14.98□□□□□ -0.01
PDLIM1-201ENST00000329399 FAM192AQ9GZU8 254 aa14.98□□□□□ -0.01
PDLIM1-201ENST00000329399 NXF5Q9H1B4 397 aaKnown RBP14.98□□□□□ -0.01
PDLIM1-201ENST00000329399 DEPPQ9NTK1 212 aa14.98□□□□□ -0.01
PDLIM1-201ENST00000329399 FBXO34Q9NWN3 711 aa14.98□□□□□ -0.01
PDLIM1-201ENST00000329399 ABI3Q9P2A4 366 aa14.98□□□□□ -0.01
PDLIM1-201ENST00000329399 RHCGQ9UBD6 479 aa14.98□□□□□ -0.01
PDLIM1-201ENST00000329399 SPTBN1Q01082 2364 aaKnown RBP14.98□□□□□ -0.01
PDLIM1-201ENST00000329399 A6NHS1 94 aa14.97□□□□□ -0.01
PDLIM1-201ENST00000329399 TRIM64CA6NLI5 447 aa14.97□□□□□ -0.01
PDLIM1-201ENST00000329399 MITFO75030 526 aaPredicted RBP14.97□□□□□ -0.01
PDLIM1-201ENST00000329399 IL12BP29460 328 aa14.97□□□□□ -0.01
PDLIM1-201ENST00000329399 RFC3P40938 356 aa14.97□□□□□ -0.01
PDLIM1-201ENST00000329399 RBM34P42696 430 aaKnown RBP14.97□□□□□ -0.01
PDLIM1-201ENST00000329399 CLK3P49761 638 aaKnown RBP14.97□□□□□ -0.01
PDLIM1-201ENST00000329399 SSR4P51571 173 aa14.97□□□□□ -0.01
PDLIM1-201ENST00000329399 TDGF1P3P51864 188 aa14.97□□□□□ -0.01
PDLIM1-201ENST00000329399 GTF2A1P52655 376 aaPredicted RBP14.97□□□□□ -0.01
PDLIM1-201ENST00000329399 CRISP1P54107 249 aa14.97□□□□□ -0.01
PDLIM1-201ENST00000329399 NR1H2P55055 460 aa14.97□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 86.9 ms