RNA–Protein interactions for RNA: ENST00000328560.12

ATP2C1-201, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

TSL 1 (best) BASIC

Gene ATP2C1, Length 3,484 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-201ENST00000328560 ATP12AP54707 1039 aa12.97□□□□□ -0.33
ATP2C1-201ENST00000328560 C1orf61Q13536 156 aa12.97□□□□□ -0.33
ATP2C1-201ENST00000328560 IZUMO1Q8IYV9 350 aa12.97□□□□□ -0.33
ATP2C1-201ENST00000328560 TCEAL2Q9H3H9 227 aaPredicted RBP12.97□□□□□ -0.33
ATP2C1-201ENST00000328560 NUDT15Q9NV35 164 aa12.97□□□□□ -0.33
ATP2C1-201ENST00000328560 EVA1BQ9NVM1 165 aa12.97□□□□□ -0.33
ATP2C1-201ENST00000328560 ZMIZ1Q9ULJ6 1067 aa12.97□□□□□ -0.33
ATP2C1-201ENST00000328560 A0A1W2PQF6 199 aa12.97□□□□□ -0.33
ATP2C1-201ENST00000328560 FAM171A2A8MVW0 826 aa12.97□□□□□ -0.33
ATP2C1-201ENST00000328560 J3QRE1 110 aa12.97□□□□□ -0.33
ATP2C1-201ENST00000328560 ADAM11O75078 769 aa12.97□□□□□ -0.33
ATP2C1-201ENST00000328560 HK1P19367 917 aa12.97□□□□□ -0.33
ATP2C1-201ENST00000328560 CFL1P23528 166 aaKnown RBP12.97□□□□□ -0.33
ATP2C1-201ENST00000328560 GRPRP30550 384 aa12.97□□□□□ -0.33
ATP2C1-201ENST00000328560 AKT2P31751 481 aa12.97□□□□□ -0.33
ATP2C1-201ENST00000328560 RRAS2P62070 204 aaPredicted RBP12.97□□□□□ -0.33
ATP2C1-201ENST00000328560 GARNL3Q5VVW2 1013 aa12.97□□□□□ -0.33
ATP2C1-201ENST00000328560 PRR23CQ6ZRP0 262 aa12.97□□□□□ -0.33
ATP2C1-201ENST00000328560 LRRC28Q86X40 367 aaPredicted RBP12.97□□□□□ -0.33
ATP2C1-201ENST00000328560 TIGD4Q8IY51 512 aa12.97□□□□□ -0.33
ATP2C1-201ENST00000328560 RNF113BQ8IZP6 322 aaKnown RBP12.97□□□□□ -0.33
ATP2C1-201ENST00000328560 LRRC17Q8N6Y2 441 aa12.97□□□□□ -0.33
ATP2C1-201ENST00000328560 DUSP18Q8NEJ0 188 aa12.97□□□□□ -0.33
ATP2C1-201ENST00000328560 OR5H6Q8NGV6 325 aa12.97□□□□□ -0.33
ATP2C1-201ENST00000328560 DEDD2Q8WXF8 326 aa12.97□□□□□ -0.33
ATP2C1-201ENST00000328560 ACOT12Q8WYK0 555 aa12.97□□□□□ -0.33
ATP2C1-201ENST00000328560 TM4SF19Q96DZ7 209 aa12.97□□□□□ -0.33
ATP2C1-201ENST00000328560 FLRT3Q9NZU0 649 aa12.97□□□□□ -0.33
ATP2C1-201ENST00000328560 ZNF222Q9UK12 451 aa12.97□□□□□ -0.33
ATP2C1-201ENST00000328560 TFPIP10646 304 aa12.97□□□□□ -0.33
ATP2C1-201ENST00000328560 CTSEP14091 401 aa12.97□□□□□ -0.33
ATP2C1-201ENST00000328560 ERP29P30040 261 aaKnown RBP12.97□□□□□ -0.33
ATP2C1-201ENST00000328560 PSMB10P40306 273 aa12.97□□□□□ -0.33
ATP2C1-201ENST00000328560 HTR2BP41595 481 aa12.97□□□□□ -0.33
ATP2C1-201ENST00000328560 NTRK2Q16620 822 aa12.97□□□□□ -0.33
ATP2C1-201ENST00000328560 FAM205BPQ63HN1 556 aa12.97□□□□□ -0.33
ATP2C1-201ENST00000328560 OR6K6Q8NGW6 343 aa12.97□□□□□ -0.33
ATP2C1-201ENST00000328560 FLVCR1-AS1Q8TAF5 88 aa12.97□□□□□ -0.33
ATP2C1-201ENST00000328560 ZNF559Q9BR84 538 aa12.97□□□□□ -0.33
ATP2C1-201ENST00000328560 ADGRL4Q9HBW9 690 aa12.97□□□□□ -0.33
ATP2C1-201ENST00000328560 BRD7Q9NPI1 651 aa12.97□□□□□ -0.33
ATP2C1-201ENST00000328560 DUSP22Q9NRW4 184 aa12.97□□□□□ -0.33
ATP2C1-201ENST00000328560 CYSLTR2Q9NS75 346 aa12.97□□□□□ -0.33
ATP2C1-201ENST00000328560 NTMQ9P121 344 aa12.97□□□□□ -0.33
ATP2C1-201ENST00000328560 RPS6KB2Q9UBS0 482 aa12.97□□□□□ -0.33
ATP2C1-201ENST00000328560 TMA7Q9Y2S6 64 aaKnown RBP12.97□□□□□ -0.33
ATP2C1-201ENST00000328560 ADAM18Q9Y3Q7 739 aa12.97□□□□□ -0.33
ATP2C1-201ENST00000328560 C2orf16Q68DN1 1984 aa12.96□□□□□ -0.33
ATP2C1-201ENST00000328560 OR2B3O76000 313 aa12.96□□□□□ -0.33
ATP2C1-201ENST00000328560 SMIM10L1P0DMW3 83 aa12.96□□□□□ -0.33
ATP2C1-201ENST00000328560 ZNF85Q03923 595 aa12.96□□□□□ -0.33
ATP2C1-201ENST00000328560 ALG11Q2TAA5 492 aa12.96□□□□□ -0.33
ATP2C1-201ENST00000328560 PRICKLE4Q2TBC4 344 aa12.96□□□□□ -0.33
ATP2C1-201ENST00000328560 YIF1BQ5BJH7 314 aa12.96□□□□□ -0.33
ATP2C1-201ENST00000328560 FAAH2Q6GMR7 532 aa12.96□□□□□ -0.33
ATP2C1-201ENST00000328560 PARGQ86W56 976 aa12.96□□□□□ -0.33
ATP2C1-201ENST00000328560 ZNF671Q8TAW3 534 aa12.96□□□□□ -0.33
ATP2C1-201ENST00000328560 SNX33Q8WV41 574 aa12.96□□□□□ -0.33
ATP2C1-201ENST00000328560 HMGB4Q8WW32 186 aa12.96□□□□□ -0.33
ATP2C1-201ENST00000328560 MRPL38Q96DV4 380 aaKnown RBP12.96□□□□□ -0.33
ATP2C1-201ENST00000328560 SMIM10Q96HG1 83 aa12.96□□□□□ -0.33
ATP2C1-201ENST00000328560 MARVELD1Q9BSK0 173 aa12.96□□□□□ -0.33
ATP2C1-201ENST00000328560 NKIRAS2Q9NYR9 191 aa12.96□□□□□ -0.33
ATP2C1-201ENST00000328560 HCN3Q9P1Z3 774 aa12.96□□□□□ -0.33
ATP2C1-201ENST00000328560 TMEM5Q9Y2B1 443 aa12.96□□□□□ -0.33
ATP2C1-201ENST00000328560 AK6Q9Y3D8 172 aaKnown RBP12.96□□□□□ -0.33
ATP2C1-201ENST00000328560 IER3IP1Q9Y5U9 82 aa12.96□□□□□ -0.33
ATP2C1-201ENST00000328560 PIAS3Q9Y6X2 628 aa12.96□□□□□ -0.33
ATP2C1-201ENST00000328560 TRANK1O15050 2925 aa12.96□□□□□ -0.33
ATP2C1-201ENST00000328560 IMPA2O14732 288 aa12.96□□□□□ -0.33
ATP2C1-201ENST00000328560 FZD7O75084 574 aa12.96□□□□□ -0.33
ATP2C1-201ENST00000328560 HLA-DQB1P01920 261 aa12.96□□□□□ -0.33
ATP2C1-201ENST00000328560 GZMKP49863 264 aa12.96□□□□□ -0.33
ATP2C1-201ENST00000328560 PGDP52209 483 aa12.96□□□□□ -0.33
ATP2C1-201ENST00000328560 MAB21L1Q13394 359 aa12.96□□□□□ -0.33
ATP2C1-201ENST00000328560 FHL5Q5TD97 284 aa12.96□□□□□ -0.33
ATP2C1-201ENST00000328560 GATSQ8NAP1 163 aa12.96□□□□□ -0.33
ATP2C1-201ENST00000328560 OR4D9Q8NGE8 314 aa12.96□□□□□ -0.33
ATP2C1-201ENST00000328560 AKAP1Q92667 903 aaKnown RBP eCLIP12.96□□□□□ -0.33
ATP2C1-201ENST00000328560 SLA2Q9H6Q3 261 aa12.96□□□□□ -0.33
ATP2C1-201ENST00000328560 ERVMER34-1Q9H9K5 563 aa12.96□□□□□ -0.33
ATP2C1-201ENST00000328560 MRPL15Q9P015 296 aaKnown RBP12.96□□□□□ -0.33
ATP2C1-201ENST00000328560 TEKT2Q9UIF3 430 aa12.96□□□□□ -0.33
ATP2C1-201ENST00000328560 GNG8Q9UK08 70 aa12.96□□□□□ -0.33
ATP2C1-201ENST00000328560 PILRAQ9UKJ1 303 aa12.96□□□□□ -0.33
ATP2C1-201ENST00000328560 HRKO00198 91 aa12.96□□□□□ -0.34
ATP2C1-201ENST00000328560 SCO2O43819 266 aa12.96□□□□□ -0.34
ATP2C1-201ENST00000328560 BRINP1O60477 761 aa12.96□□□□□ -0.34
ATP2C1-201ENST00000328560 NGFRP08138 427 aa12.96□□□□□ -0.34
ATP2C1-201ENST00000328560 CELA2BP08218 269 aaPredicted RBP12.96□□□□□ -0.34
ATP2C1-201ENST00000328560 RAB3BP20337 219 aa12.96□□□□□ -0.34
ATP2C1-201ENST00000328560 HYAL1Q12794 435 aa12.96□□□□□ -0.34
ATP2C1-201ENST00000328560 RTL4Q6ZR62 310 aa12.96□□□□□ -0.34
ATP2C1-201ENST00000328560 GPALPP1Q8IXQ4 340 aa12.96□□□□□ -0.34
ATP2C1-201ENST00000328560 SNAPC3Q92966 411 aa12.96□□□□□ -0.34
ATP2C1-201ENST00000328560 CLIP3Q96DZ5 547 aa12.96□□□□□ -0.34
ATP2C1-201ENST00000328560 KCNJ15Q99712 375 aa12.96□□□□□ -0.34
ATP2C1-201ENST00000328560 GSDMCQ9BYG8 508 aa12.96□□□□□ -0.34
ATP2C1-201ENST00000328560 MED28Q9H204 178 aa12.96□□□□□ -0.34
ATP2C1-201ENST00000328560 DOCK8Q8NF50 2099 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms