RNA–Protein interactions for RNA: ENST00000327028.8

VIPAS39-201, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 5 BASIC

Gene VIPAS39, Length 2,614 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-201ENST00000327028 KDM4DQ6B0I6 523 aa9.31□□□□□ -0.92
VIPAS39-201ENST00000327028 PGBD2Q6P3X8 592 aa9.31□□□□□ -0.92
VIPAS39-201ENST00000327028 UNQ6494/PRO21346Q6UXR6 183 aa9.31□□□□□ -0.92
VIPAS39-201ENST00000327028 RNF113BQ8IZP6 322 aaKnown RBP9.31□□□□□ -0.92
VIPAS39-201ENST00000327028 ATG16L2Q8NAA4 619 aa9.31□□□□□ -0.92
VIPAS39-201ENST00000327028 AQP11Q8NBQ7 271 aa9.31□□□□□ -0.92
VIPAS39-201ENST00000327028 OR1J4Q8NGS1 313 aa9.31□□□□□ -0.92
VIPAS39-201ENST00000327028 PIGXQ8TBF5 258 aa9.31□□□□□ -0.92
VIPAS39-201ENST00000327028 MAGEE2Q8TD90 523 aaPredicted RBP9.31□□□□□ -0.92
VIPAS39-201ENST00000327028 TMEM239Q8WW34 195 aa9.31□□□□□ -0.92
VIPAS39-201ENST00000327028 C5orf34Q96MH7 638 aa9.31□□□□□ -0.92
VIPAS39-201ENST00000327028 FEVQ99581 238 aa9.31□□□□□ -0.92
VIPAS39-201ENST00000327028 DGCR6LQ9BY27 220 aa9.31□□□□□ -0.92
VIPAS39-201ENST00000327028 KRCC1Q9NPI7 259 aaPredicted RBP9.31□□□□□ -0.92
VIPAS39-201ENST00000327028 DEPPQ9NTK1 212 aa9.31□□□□□ -0.92
VIPAS39-201ENST00000327028 TMEFF2Q9UIK5 374 aaPredicted RBP9.31□□□□□ -0.92
VIPAS39-201ENST00000327028 KLF13Q9Y2Y9 288 aaPredicted RBP9.31□□□□□ -0.92
VIPAS39-201ENST00000327028 PCDHGA9Q9Y5G4 932 aaKnown RBP9.31□□□□□ -0.92
VIPAS39-201ENST00000327028 URB1O60287 2271 aaKnown RBP9.3□□□□□ -0.92
VIPAS39-201ENST00000327028 ELOA3DA6NLF2 546 aaPredicted RBP9.3□□□□□ -0.92
VIPAS39-201ENST00000327028 SP1P08047 785 aa9.3□□□□□ -0.92
VIPAS39-201ENST00000327028 CD46P15529 392 aa9.3□□□□□ -0.92
VIPAS39-201ENST00000327028 ELOA3BQ3SY89 546 aa9.3□□□□□ -0.92
VIPAS39-201ENST00000327028 ANKRD34AQ69YU3 496 aa9.3□□□□□ -0.92
VIPAS39-201ENST00000327028 SLC25A25Q6KCM7 469 aa9.3□□□□□ -0.92
VIPAS39-201ENST00000327028 ARSKQ6UWY0 536 aa9.3□□□□□ -0.92
VIPAS39-201ENST00000327028 ELOA3Q8NG57 546 aa9.3□□□□□ -0.92
VIPAS39-201ENST00000327028 OR2M7Q8NG81 312 aa9.3□□□□□ -0.92
VIPAS39-201ENST00000327028 SCMH1Q96GD3 660 aa9.3□□□□□ -0.92
VIPAS39-201ENST00000327028 RDH12Q96NR8 316 aa9.3□□□□□ -0.92
VIPAS39-201ENST00000327028 ZNF184Q99676 751 aaPredicted RBP9.3□□□□□ -0.92
VIPAS39-201ENST00000327028 HES7Q9BYE0 225 aa9.3□□□□□ -0.92
VIPAS39-201ENST00000327028 BOKQ9UMX3 212 aaPredicted RBP9.3□□□□□ -0.92
VIPAS39-201ENST00000327028 C15orf41Q9Y2V0 281 aa9.3□□□□□ -0.92
VIPAS39-201ENST00000327028 ASPMQ8IZT6 3477 aa9.3□□□□□ -0.92
VIPAS39-201ENST00000327028 CNTRLQ7Z7A1 2325 aa9.3□□□□□ -0.92
VIPAS39-201ENST00000327028 A0A087WV48 116 aa9.3□□□□□ -0.92
VIPAS39-201ENST00000327028 MED19A0JLT2 244 aaPredicted RBP9.3□□□□□ -0.92
VIPAS39-201ENST00000327028 PIP5K1CO60331 668 aa9.3□□□□□ -0.92
VIPAS39-201ENST00000327028 HSPA13P48723 471 aa9.3□□□□□ -0.92
VIPAS39-201ENST00000327028 TNFSF10P50591 281 aa9.3□□□□□ -0.92
VIPAS39-201ENST00000327028 DSCR4P56555 118 aaPredicted RBP9.3□□□□□ -0.92
VIPAS39-201ENST00000327028 LSM11P83369 360 aaKnown RBP eCLIP9.3□□□□□ -0.92
VIPAS39-201ENST00000327028 FOXF1Q12946 379 aa9.3□□□□□ -0.92
VIPAS39-201ENST00000327028 KCNAB2Q13303 367 aa9.3□□□□□ -0.92
VIPAS39-201ENST00000327028 RFX4Q33E94 735 aa9.3□□□□□ -0.92
VIPAS39-201ENST00000327028 C1orf94Q6P1W5 598 aa9.3□□□□□ -0.92
VIPAS39-201ENST00000327028 BORAQ6PGQ7 559 aa9.3□□□□□ -0.92
VIPAS39-201ENST00000327028 TTC33Q6PID6 262 aaPredicted RBP9.3□□□□□ -0.92
VIPAS39-201ENST00000327028 RRM2BQ7LG56 351 aa9.3□□□□□ -0.92
VIPAS39-201ENST00000327028 NRMQ8IXM6 262 aa9.3□□□□□ -0.92
VIPAS39-201ENST00000327028 ZCCHC14Q8WYQ9 949 aaKnown RBP9.3□□□□□ -0.92
VIPAS39-201ENST00000327028 DTNBP1Q96EV8 351 aa9.3□□□□□ -0.92
VIPAS39-201ENST00000327028 MRGPRX4Q96LA9 322 aa9.3□□□□□ -0.92
VIPAS39-201ENST00000327028 JSRP1Q96MG2 331 aaPredicted RBP9.3□□□□□ -0.92
VIPAS39-201ENST00000327028 TMEM43Q9BTV4 400 aa9.3□□□□□ -0.92
VIPAS39-201ENST00000327028 SLC19A3Q9BZV2 496 aa9.3□□□□□ -0.92
VIPAS39-201ENST00000327028 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP9.3□□□□□ -0.92
VIPAS39-201ENST00000327028 SMPD3Q9NY59 655 aaPredicted RBP9.3□□□□□ -0.92
VIPAS39-201ENST00000327028 TUBA8Q9NY65 449 aaPredicted RBP9.3□□□□□ -0.92
VIPAS39-201ENST00000327028 OSGIN1Q9UJX0 560 aa9.3□□□□□ -0.92
VIPAS39-201ENST00000327028 MED31Q9Y3C7 131 aa9.3□□□□□ -0.92
VIPAS39-201ENST00000327028 ORC6Q9Y5N6 252 aa9.3□□□□□ -0.92
VIPAS39-201ENST00000327028 FRYQ5TBA9 3013 aa9.3□□□□□ -0.92
VIPAS39-201ENST00000327028 IGKV1D-42A0A075B6H8 117 aa9.29□□□□□ -0.92
VIPAS39-201ENST00000327028 C7orf72A4D263 438 aa9.29□□□□□ -0.92
VIPAS39-201ENST00000327028 PINLYPA6NC86 204 aa9.29□□□□□ -0.92
VIPAS39-201ENST00000327028 DLGAP1O14490 977 aa9.29□□□□□ -0.92
VIPAS39-201ENST00000327028 CBR3O75828 277 aa9.29□□□□□ -0.92
VIPAS39-201ENST00000327028 GASTP01350 101 aa9.29□□□□□ -0.92
VIPAS39-201ENST00000327028 OMPP47874 163 aa9.29□□□□□ -0.92
VIPAS39-201ENST00000327028 CTBP2P56545 445 aa9.29□□□□□ -0.92
VIPAS39-201ENST00000327028 GPR85P60893 370 aa9.29□□□□□ -0.92
VIPAS39-201ENST00000327028 PRKCDQ05655 676 aa9.29□□□□□ -0.92
VIPAS39-201ENST00000327028 FOXO1Q12778 655 aa9.29□□□□□ -0.92
VIPAS39-201ENST00000327028 MERTKQ12866 999 aa9.29□□□□□ -0.92
VIPAS39-201ENST00000327028 ZNF766Q5HY98 468 aa9.29□□□□□ -0.92
VIPAS39-201ENST00000327028 ZER1Q7Z7L7 766 aa9.29□□□□□ -0.92
VIPAS39-201ENST00000327028 GNPDA2Q8TDQ7 276 aa9.29□□□□□ -0.92
VIPAS39-201ENST00000327028 TM9SF4Q92544 642 aa9.29□□□□□ -0.92
VIPAS39-201ENST00000327028 ZBTB8AQ96BR9 441 aa9.29□□□□□ -0.92
VIPAS39-201ENST00000327028 NIPSNAP1Q9BPW8 284 aa9.29□□□□□ -0.92
VIPAS39-201ENST00000327028 ZNF556Q9HAH1 456 aa9.29□□□□□ -0.92
VIPAS39-201ENST00000327028 ZFP64Q9NPA5 681 aa9.29□□□□□ -0.92
VIPAS39-201ENST00000327028 PAPOLBQ9NRJ5 636 aaKnown RBP9.29□□□□□ -0.92
VIPAS39-201ENST00000327028 KRT84Q9NSB2 600 aa9.29□□□□□ -0.92
VIPAS39-201ENST00000327028 DKKL1Q9UK85 242 aa9.29□□□□□ -0.92
VIPAS39-201ENST00000327028 VDAC3Q9Y277 283 aa9.29□□□□□ -0.92
VIPAS39-201ENST00000327028 TMEM5Q9Y2B1 443 aa9.29□□□□□ -0.92
VIPAS39-201ENST00000327028 POFUT2Q9Y2G5 429 aa9.29□□□□□ -0.92
VIPAS39-201ENST00000327028 TMED7-TICAM2A0A0A6YYA0 188 aa9.29□□□□□ -0.92
VIPAS39-201ENST00000327028 IGF2P01344 180 aa9.29□□□□□ -0.92
VIPAS39-201ENST00000327028 PTNP21246 168 aa9.29□□□□□ -0.92
VIPAS39-201ENST00000327028 CXCR1P25024 350 aa9.29□□□□□ -0.92
VIPAS39-201ENST00000327028 DPP4P27487 766 aa9.29□□□□□ -0.92
VIPAS39-201ENST00000327028 RAD23AP54725 363 aa9.29□□□□□ -0.92
VIPAS39-201ENST00000327028 IGFL3Q6UXB1 125 aa9.29□□□□□ -0.92
VIPAS39-201ENST00000327028 CD300LDQ6UXZ3 194 aa9.29□□□□□ -0.92
VIPAS39-201ENST00000327028 PRICKLE2Q7Z3G6 844 aa9.29□□□□□ -0.92
VIPAS39-201ENST00000327028 SULF2Q8IWU5 870 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms