RNA–Protein interactions for RNA: ENST00000322213.8

SMC1A-201, Transcript of structural maintenance of chromosomes 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC1A, Length 9,784 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-201ENST00000322213 C17orf113A0A1B0GUU1 675 aa6.63□□□□□ -1.35
SMC1A-201ENST00000322213 SNRPGP15A8MWD9 76 aa6.63□□□□□ -1.35
SMC1A-201ENST00000322213 RD3LP0DJH9 198 aa6.63□□□□□ -1.35
SMC1A-201ENST00000322213 CXCR1P25024 350 aa6.63□□□□□ -1.35
SMC1A-201ENST00000322213 ATP5A1P25705 553 aaKnown RBP6.63□□□□□ -1.35
SMC1A-201ENST00000322213 UBXN10Q96LJ8 280 aa6.63□□□□□ -1.35
SMC1A-201ENST00000322213 AHSA1O95433 338 aa6.62□□□□□ -1.35
SMC1A-201ENST00000322213 GASTP01350 101 aa6.62□□□□□ -1.35
SMC1A-201ENST00000322213 HLA-HP01893 362 aa6.62□□□□□ -1.35
SMC1A-201ENST00000322213 ENPP1P22413 925 aa6.62□□□□□ -1.35
SMC1A-201ENST00000322213 SLC16A12Q6ZSM3 486 aa6.62□□□□□ -1.35
SMC1A-201ENST00000322213 CPOQ8IVL8 374 aa6.62□□□□□ -1.35
SMC1A-201ENST00000322213 CD200R1Q8TD46 325 aa6.62□□□□□ -1.35
SMC1A-201ENST00000322213 ZBTB8AQ96BR9 441 aa6.62□□□□□ -1.35
SMC1A-201ENST00000322213 BSCL2Q96G97 398 aaPredicted RBP6.62□□□□□ -1.35
SMC1A-201ENST00000322213 ZNF587Q96SQ5 575 aaPredicted RBP6.62□□□□□ -1.35
SMC1A-201ENST00000322213 PTDSS2Q9BVG9 487 aa6.62□□□□□ -1.35
SMC1A-201ENST00000322213 GLIS2Q9BZE0 524 aaPredicted RBP6.62□□□□□ -1.35
SMC1A-201ENST00000322213 PNO1Q9NRX1 252 aaKnown RBP6.62□□□□□ -1.35
SMC1A-201ENST00000322213 ICKQ9UPZ9 632 aa6.62□□□□□ -1.35
SMC1A-201ENST00000322213 SLC22A23A1A5C7 686 aa6.62□□□□□ -1.35
SMC1A-201ENST00000322213 LPLP06858 475 aa6.62□□□□□ -1.35
SMC1A-201ENST00000322213 RIDAP52758 137 aaKnown RBP6.62□□□□□ -1.35
SMC1A-201ENST00000322213 C1orf94Q6P1W5 598 aa6.62□□□□□ -1.35
SMC1A-201ENST00000322213 COMMD6Q7Z4G1 85 aa6.62□□□□□ -1.35
SMC1A-201ENST00000322213 ECHDC3Q96DC8 303 aa6.62□□□□□ -1.35
SMC1A-201ENST00000322213 CSNK1G3Q9Y6M4 447 aa6.62□□□□□ -1.35
SMC1A-201ENST00000322213 A0A087WZY1 265 aa6.62□□□□□ -1.35
SMC1A-201ENST00000322213 TCRBV5S2A0A599 114 aa6.62□□□□□ -1.35
SMC1A-201ENST00000322213 HMX2A2RU54 273 aa6.62□□□□□ -1.35
SMC1A-201ENST00000322213 TMEM212A6NML5 194 aa6.62□□□□□ -1.35
SMC1A-201ENST00000322213 PCCBP05166 539 aa6.62□□□□□ -1.35
SMC1A-201ENST00000322213 CCR7P32248 378 aa6.62□□□□□ -1.35
SMC1A-201ENST00000322213 MFGE8Q08431 387 aaPredicted RBP6.62□□□□□ -1.35
SMC1A-201ENST00000322213 TMEM81Q6P7N7 255 aa6.62□□□□□ -1.35
SMC1A-201ENST00000322213 CACUL1Q86Y37 369 aa6.62□□□□□ -1.35
SMC1A-201ENST00000322213 ARHGAP12Q8IWW6 846 aa6.62□□□□□ -1.35
SMC1A-201ENST00000322213 KLHDC8BQ8IXV7 354 aa6.62□□□□□ -1.35
SMC1A-201ENST00000322213 SUSD6Q92537 303 aa6.62□□□□□ -1.35
SMC1A-201ENST00000322213 ST6GAL2Q96JF0 529 aa6.62□□□□□ -1.35
SMC1A-201ENST00000322213 OR5M11Q96RB7 305 aa6.62□□□□□ -1.35
SMC1A-201ENST00000322213 AMBRA1Q9C0C7 1298 aa6.62□□□□□ -1.35
SMC1A-201ENST00000322213 KPTNQ9Y664 436 aa6.62□□□□□ -1.35
SMC1A-201ENST00000322213 ZNF831Q5JPB2 1677 aa6.62□□□□□ -1.35
SMC1A-201ENST00000322213 G0S2P27469 103 aa6.62□□□□□ -1.35
SMC1A-201ENST00000322213 SOX2P48431 317 aa6.62□□□□□ -1.35
SMC1A-201ENST00000322213 CTAG1AP78358 180 aa6.62□□□□□ -1.35
SMC1A-201ENST00000322213 MFSD13AQ14CX5 517 aa6.62□□□□□ -1.35
SMC1A-201ENST00000322213 ACOT7LQ6ZUV0 252 aa6.62□□□□□ -1.35
SMC1A-201ENST00000322213 KANSL1Q7Z3B3 1105 aa6.62□□□□□ -1.35
SMC1A-201ENST00000322213 NAGSQ8N159 534 aa6.62□□□□□ -1.35
SMC1A-201ENST00000322213 FAM86B1Q8N7N1 296 aa6.62□□□□□ -1.35
SMC1A-201ENST00000322213 CCDC54Q8NEL0 328 aa6.62□□□□□ -1.35
SMC1A-201ENST00000322213 OR5T1Q8NG75 326 aa6.62□□□□□ -1.35
SMC1A-201ENST00000322213 SORCS2Q96PQ0 1159 aa6.62□□□□□ -1.35
SMC1A-201ENST00000322213 PTPN18Q99952 460 aa6.62□□□□□ -1.35
SMC1A-201ENST00000322213 URM1Q9BTM9 101 aaKnown RBP6.62□□□□□ -1.35
SMC1A-201ENST00000322213 TAF9BQ9HBM6 251 aa6.62□□□□□ -1.35
SMC1A-201ENST00000322213 MEGF11A6BM72 1044 aa6.62□□□□□ -1.35
SMC1A-201ENST00000322213 LRIT2A6NDA9 550 aa6.62□□□□□ -1.35
SMC1A-201ENST00000322213 CLEC2LP0C7M8 214 aa6.62□□□□□ -1.35
SMC1A-201ENST00000322213 ZNF44P15621 663 aa6.62□□□□□ -1.35
SMC1A-201ENST00000322213 AMD1P17707 334 aa6.62□□□□□ -1.35
SMC1A-201ENST00000322213 SRMP19623 302 aa6.62□□□□□ -1.35
SMC1A-201ENST00000322213 APEX1P27695 318 aaKnown RBP6.62□□□□□ -1.35
SMC1A-201ENST00000322213 HTR1FP30939 366 aa6.62□□□□□ -1.35
SMC1A-201ENST00000322213 BMPR1AP36894 532 aa6.62□□□□□ -1.35
SMC1A-201ENST00000322213 TLE4Q04727 773 aa6.62□□□□□ -1.35
SMC1A-201ENST00000322213 SSBP1Q04837 148 aaKnown RBP6.62□□□□□ -1.35
SMC1A-201ENST00000322213 BEX5Q5H9J7 111 aa6.62□□□□□ -1.35
SMC1A-201ENST00000322213 RTL6Q6ICC9 239 aa6.62□□□□□ -1.35
SMC1A-201ENST00000322213 C5orf46Q6UWT4 87 aa6.62□□□□□ -1.35
SMC1A-201ENST00000322213 SH2D5Q6ZV89 423 aa6.62□□□□□ -1.35
SMC1A-201ENST00000322213 UMODL1-AS1Q8N2C9 162 aa6.62□□□□□ -1.35
SMC1A-201ENST00000322213 TMEM145Q8NBT3 493 aa6.62□□□□□ -1.35
SMC1A-201ENST00000322213 MMP26Q9NRE1 261 aa6.62□□□□□ -1.35
SMC1A-201ENST00000322213 PCDHGA2Q9Y5H1 932 aa6.62□□□□□ -1.35
SMC1A-201ENST00000322213 OR6C6A6NF89 314 aa6.62□□□□□ -1.35
SMC1A-201ENST00000322213 TRABD2BA6NFA1 517 aa6.62□□□□□ -1.35
SMC1A-201ENST00000322213 UMAD1C9J7I0 102 aa6.62□□□□□ -1.35
SMC1A-201ENST00000322213 ERVH48-1M5A8F1 160 aa6.62□□□□□ -1.35
SMC1A-201ENST00000322213 PRNPP04156 253 aa6.62□□□□□ -1.35
SMC1A-201ENST00000322213 BPIP17213 487 aa6.62□□□□□ -1.35
SMC1A-201ENST00000322213 TAGLN2P37802 199 aaKnown RBP6.62□□□□□ -1.35
SMC1A-201ENST00000322213 SLC1A3P43003 542 aa6.62□□□□□ -1.35
SMC1A-201ENST00000322213 KIR2DL3P43628 341 aa6.62□□□□□ -1.35
SMC1A-201ENST00000322213 RAB1AP62820 205 aa6.62□□□□□ -1.35
SMC1A-201ENST00000322213 LIX1LQ8IVB5 337 aa6.62□□□□□ -1.35
SMC1A-201ENST00000322213 FRMD1Q8N878 549 aa6.62□□□□□ -1.35
SMC1A-201ENST00000322213 DNAAF1Q8NEP3 725 aa6.62□□□□□ -1.35
SMC1A-201ENST00000322213 PXYLP1Q8TE99 480 aa6.62□□□□□ -1.35
SMC1A-201ENST00000322213 SOCS4Q8WXH5 440 aa6.62□□□□□ -1.35
SMC1A-201ENST00000322213 FRZBQ92765 325 aa6.62□□□□□ -1.35
SMC1A-201ENST00000322213 TMEM19Q96HH6 336 aa6.62□□□□□ -1.35
SMC1A-201ENST00000322213 OCSTAMPQ9BR26 566 aa6.62□□□□□ -1.35
SMC1A-201ENST00000322213 SOHLH2Q9NX45 425 aa6.62□□□□□ -1.35
SMC1A-201ENST00000322213 LINC00862A6NCI5 91 aa6.62□□□□□ -1.35
SMC1A-201ENST00000322213 GNRH1P01148 92 aa6.62□□□□□ -1.35
SMC1A-201ENST00000322213 EVX1P49640 407 aa6.62□□□□□ -1.35
SMC1A-201ENST00000322213 STK19P49842 368 aaPredicted RBP6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms