RNA–Protein interactions for RNA: ENST00000319854.7

SHROOM1-201, Transcript of shroom family member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SHROOM1, Length 3,190 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-201ENST00000319854 DNASE1P24855 282 aa14.4□□□□□ -0.1
SHROOM1-201ENST00000319854 GBX2P52951 348 aaPredicted RBP14.4□□□□□ -0.1
SHROOM1-201ENST00000319854 RPS15AP62244 130 aaKnown RBP14.4□□□□□ -0.1
SHROOM1-201ENST00000319854 EFNB1P98172 346 aa14.4□□□□□ -0.1
SHROOM1-201ENST00000319854 MLC1Q15049 377 aa14.4□□□□□ -0.1
SHROOM1-201ENST00000319854 ST3GAL2Q16842 350 aa14.4□□□□□ -0.1
SHROOM1-201ENST00000319854 FCRLBQ6BAA4 426 aa14.4□□□□□ -0.1
SHROOM1-201ENST00000319854 GAL3ST3Q96A11 431 aa14.4□□□□□ -0.1
SHROOM1-201ENST00000319854 RERGQ96A58 199 aaPredicted RBP14.4□□□□□ -0.1
SHROOM1-201ENST00000319854 ABHD1Q96SE0 405 aa14.4□□□□□ -0.1
SHROOM1-201ENST00000319854 TBX5Q99593 518 aa14.4□□□□□ -0.1
SHROOM1-201ENST00000319854 GSX2Q9BZM3 304 aa14.4□□□□□ -0.1
SHROOM1-201ENST00000319854 ENAMQ9NRM1 1142 aa14.4□□□□□ -0.1
SHROOM1-201ENST00000319854 SLC7A7Q9UM01 511 aa14.4□□□□□ -0.1
SHROOM1-201ENST00000319854 TEX46H3BTG2 121 aa14.4□□□□□ -0.1
SHROOM1-201ENST00000319854 MTRF1O75570 445 aaKnown RBP14.4□□□□□ -0.1
SHROOM1-201ENST00000319854 SLC16A1P53985 500 aa14.4□□□□□ -0.1
SHROOM1-201ENST00000319854 HSF2Q03933 536 aa14.4□□□□□ -0.1
SHROOM1-201ENST00000319854 MAPK14Q16539 360 aa14.4□□□□□ -0.1
SHROOM1-201ENST00000319854 FCRL6Q6DN72 434 aa14.4□□□□□ -0.1
SHROOM1-201ENST00000319854 VASNQ6EMK4 673 aa14.4□□□□□ -0.1
SHROOM1-201ENST00000319854 ZNF687Q8N1G0 1237 aa14.4□□□□□ -0.1
SHROOM1-201ENST00000319854 BBS1Q8NFJ9 593 aa14.4□□□□□ -0.1
SHROOM1-201ENST00000319854 OR4F15Q8NGB8 312 aa14.4□□□□□ -0.1
SHROOM1-201ENST00000319854 OR6M1Q8NGM8 313 aa14.4□□□□□ -0.1
SHROOM1-201ENST00000319854 RFT1Q96AA3 541 aa14.4□□□□□ -0.1
SHROOM1-201ENST00000319854 CDCA3Q99618 268 aaPredicted RBP14.4□□□□□ -0.1
SHROOM1-201ENST00000319854 CCDC3Q9BQI4 270 aa14.4□□□□□ -0.1
SHROOM1-201ENST00000319854 ZC4H2Q9NQZ6 224 aa14.4□□□□□ -0.1
SHROOM1-201ENST00000319854 DLL4Q9NR61 685 aa14.4□□□□□ -0.1
SHROOM1-201ENST00000319854 KLHL28Q9NXS3 571 aa14.4□□□□□ -0.1
SHROOM1-201ENST00000319854 ACAD8Q9UKU7 415 aa14.4□□□□□ -0.1
SHROOM1-201ENST00000319854 CACNG2Q9Y698 323 aa14.4□□□□□ -0.1
SHROOM1-201ENST00000319854 DENND4AQ7Z401 1863 aa14.4□□□□□ -0.1
SHROOM1-201ENST00000319854 WDFY4Q6ZS81 3184 aa14.4□□□□□ -0.1
SHROOM1-201ENST00000319854 MUC3AQ02505 3323 aa14.39□□□□□ -0.11
SHROOM1-201ENST00000319854 FANCMQ8IYD8 2048 aa14.39□□□□□ -0.11
SHROOM1-201ENST00000319854 GIMAP1-GIMAP5A0A087WTJ2 511 aa14.39□□□□□ -0.11
SHROOM1-201ENST00000319854 TMEM129A0AVI4 362 aa14.39□□□□□ -0.11
SHROOM1-201ENST00000319854 ZC3H12DA2A288 527 aaKnown RBP14.39□□□□□ -0.11
SHROOM1-201ENST00000319854 PRR19A6NJB7 356 aa14.39□□□□□ -0.11
SHROOM1-201ENST00000319854 GPR171O14626 319 aa14.39□□□□□ -0.11
SHROOM1-201ENST00000319854 FGF17O60258 216 aa14.39□□□□□ -0.11
SHROOM1-201ENST00000319854 CCR6P51684 374 aa14.39□□□□□ -0.11
SHROOM1-201ENST00000319854 ERV3-1Q14264 604 aa14.39□□□□□ -0.11
SHROOM1-201ENST00000319854 MFSD12Q6NUT3 480 aa14.39□□□□□ -0.11
SHROOM1-201ENST00000319854 PIAS4Q8N2W9 510 aaPredicted RBP14.39□□□□□ -0.11
SHROOM1-201ENST00000319854 GIMAP5Q96F15 307 aa14.39□□□□□ -0.11
SHROOM1-201ENST00000319854 PINK1Q9BXM7 581 aa14.39□□□□□ -0.11
SHROOM1-201ENST00000319854 S1PR5Q9H228 398 aa14.39□□□□□ -0.11
SHROOM1-201ENST00000319854 IL21RQ9HBE5 538 aa14.39□□□□□ -0.11
SHROOM1-201ENST00000319854 C2orf42Q9NWW7 574 aa14.39□□□□□ -0.11
SHROOM1-201ENST00000319854 FKBP7Q9Y680 259 aa14.39□□□□□ -0.11
SHROOM1-201ENST00000319854 B4DGG1 531 aa14.39□□□□□ -0.11
SHROOM1-201ENST00000319854 LGALS8O00214 317 aa14.39□□□□□ -0.11
SHROOM1-201ENST00000319854 AHCYP23526 432 aa14.39□□□□□ -0.11
SHROOM1-201ENST00000319854 CFL1P23528 166 aaKnown RBP14.39□□□□□ -0.11
SHROOM1-201ENST00000319854 PTBP1P26599 531 aaKnown RBP eCLIP14.39□□□□□ -0.11
SHROOM1-201ENST00000319854 TLX1P31314 330 aaPredicted RBP14.39□□□□□ -0.11
SHROOM1-201ENST00000319854 TNFRSF17Q02223 184 aa14.39□□□□□ -0.11
SHROOM1-201ENST00000319854 ZNF155Q12901 538 aaPredicted RBP14.39□□□□□ -0.11
SHROOM1-201ENST00000319854 GNA13Q14344 377 aa14.39□□□□□ -0.11
SHROOM1-201ENST00000319854 SLC27A4Q6P1M0 643 aa14.39□□□□□ -0.11
SHROOM1-201ENST00000319854 GRHL3Q8TE85 626 aa14.39□□□□□ -0.11
SHROOM1-201ENST00000319854 NXPE2Q96DL1 559 aa14.39□□□□□ -0.11
SHROOM1-201ENST00000319854 MED20Q9H944 212 aa14.39□□□□□ -0.11
SHROOM1-201ENST00000319854 CPNE7Q9UBL6 633 aa14.39□□□□□ -0.11
SHROOM1-201ENST00000319854 HSFX4A0A1B0GTS1 333 aaPredicted RBP14.38□□□□□ -0.11
SHROOM1-201ENST00000319854 HSFX3A0A1B0GWH4 333 aaPredicted RBP14.38□□□□□ -0.11
SHROOM1-201ENST00000319854 RGS11O94810 467 aa14.38□□□□□ -0.11
SHROOM1-201ENST00000319854 TCRBP04435 133 aa14.38□□□□□ -0.11
SHROOM1-201ENST00000319854 GIFP27352 417 aa14.38□□□□□ -0.11
SHROOM1-201ENST00000319854 DSG2Q14126 1118 aa14.38□□□□□ -0.11
SHROOM1-201ENST00000319854 ZNF791Q3KP31 576 aaPredicted RBP14.38□□□□□ -0.11
SHROOM1-201ENST00000319854 SLC36A2Q495M3 483 aa14.38□□□□□ -0.11
SHROOM1-201ENST00000319854 TMEM64Q6YI46 380 aa14.38□□□□□ -0.11
SHROOM1-201ENST00000319854 C10orf90Q96M02 699 aa14.38□□□□□ -0.11
SHROOM1-201ENST00000319854 FUZQ9BT04 418 aa14.38□□□□□ -0.11
SHROOM1-201ENST00000319854 TPSD1Q9BZJ3 242 aa14.38□□□□□ -0.11
SHROOM1-201ENST00000319854 CACYBPQ9HB71 228 aaKnown RBP14.38□□□□□ -0.11
SHROOM1-201ENST00000319854 BCL2L10Q9HD36 194 aa14.38□□□□□ -0.11
SHROOM1-201ENST00000319854 NLGN3Q9NZ94 848 aa14.38□□□□□ -0.11
SHROOM1-201ENST00000319854 DAPP1Q9UN19 280 aa14.38□□□□□ -0.11
SHROOM1-201ENST00000319854 THY1P04216 161 aa14.38□□□□□ -0.11
SHROOM1-201ENST00000319854 ACP2P11117 423 aa14.38□□□□□ -0.11
SHROOM1-201ENST00000319854 GABRG2P18507 467 aa14.38□□□□□ -0.11
SHROOM1-201ENST00000319854 SELENOPP49908 381 aa14.38□□□□□ -0.11
SHROOM1-201ENST00000319854 ZP1P60852 638 aa14.38□□□□□ -0.11
SHROOM1-201ENST00000319854 HTR4Q13639 388 aa14.38□□□□□ -0.11
SHROOM1-201ENST00000319854 ZNF273Q14593 569 aa14.38□□□□□ -0.11
SHROOM1-201ENST00000319854 CD276Q5ZPR3 534 aa14.38□□□□□ -0.11
SHROOM1-201ENST00000319854 MZT2AQ6P582 158 aa14.38□□□□□ -0.11
SHROOM1-201ENST00000319854 LYPD4Q6UWN0 246 aa14.38□□□□□ -0.11
SHROOM1-201ENST00000319854 FRRS1Q6ZNA5 592 aa14.38□□□□□ -0.11
SHROOM1-201ENST00000319854 LUZP2Q86TE4 346 aa14.38□□□□□ -0.11
SHROOM1-201ENST00000319854 SLC22A18ASQ8N1D0 253 aa14.38□□□□□ -0.11
SHROOM1-201ENST00000319854 SLC37A2Q8TED4 501 aa14.38□□□□□ -0.11
SHROOM1-201ENST00000319854 SMAP2Q8WU79 429 aaPredicted RBP14.38□□□□□ -0.11
SHROOM1-201ENST00000319854 RSC1A1Q92681 617 aa14.38□□□□□ -0.11
SHROOM1-201ENST00000319854 DACT3Q96B18 629 aaPredicted RBP14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms