RNA–Protein interactions for RNA: ENST00000318266.9

PTPRA-202, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRA, Length 3,219 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-202ENST00000318266 AKR1C1Q04828 323 aa8.94□□□□□ -0.98
PTPRA-202ENST00000318266 CRMP1Q14194 572 aa8.94□□□□□ -0.98
PTPRA-202ENST00000318266 TMEM44Q2T9K0 475 aa8.94□□□□□ -0.98
PTPRA-202ENST00000318266 STPG1Q5TH74 334 aa8.94□□□□□ -0.98
PTPRA-202ENST00000318266 HACD4Q5VWC8 232 aa8.94□□□□□ -0.98
PTPRA-202ENST00000318266 GSG1LQ6UXU4 331 aa8.94□□□□□ -0.98
PTPRA-202ENST00000318266 KLHDC8AQ8IYD2 350 aa8.94□□□□□ -0.98
PTPRA-202ENST00000318266 C1orf216Q8TAB5 229 aa8.94□□□□□ -0.98
PTPRA-202ENST00000318266 HAVCR2Q8TDQ0 301 aa8.94□□□□□ -0.98
PTPRA-202ENST00000318266 CNRIP1Q96F85 164 aaPredicted RBP8.94□□□□□ -0.98
PTPRA-202ENST00000318266 SLC6A20Q9NP91 592 aa8.94□□□□□ -0.98
PTPRA-202ENST00000318266 TM7SF3Q9NS93 570 aa8.94□□□□□ -0.98
PTPRA-202ENST00000318266 POT1Q9NUX5 634 aa8.94□□□□□ -0.98
PTPRA-202ENST00000318266 ATG4BQ9Y4P1 393 aa8.94□□□□□ -0.98
PTPRA-202ENST00000318266 NPIPA5A0A0B4J1W7 369 aa8.94□□□□□ -0.98
PTPRA-202ENST00000318266 A0A0G2JPF8 293 aa8.94□□□□□ -0.98
PTPRA-202ENST00000318266 MEIS3P1A6NDR6 274 aa8.94□□□□□ -0.98
PTPRA-202ENST00000318266 HNRNPCL3B7ZW38 293 aa8.94□□□□□ -0.98
PTPRA-202ENST00000318266 NPIPA7E9PJI5 369 aa8.94□□□□□ -0.98
PTPRA-202ENST00000318266 LINC01387J3KSC0 135 aa8.94□□□□□ -0.98
PTPRA-202ENST00000318266 DNASE2O00115 360 aaPredicted RBP8.94□□□□□ -0.98
PTPRA-202ENST00000318266 AIPO00170 330 aa8.94□□□□□ -0.98
PTPRA-202ENST00000318266 GRM6O15303 877 aa8.94□□□□□ -0.98
PTPRA-202ENST00000318266 ATP1B1P05026 303 aa8.94□□□□□ -0.98
PTPRA-202ENST00000318266 FGF2P09038 288 aa8.94□□□□□ -0.98
PTPRA-202ENST00000318266 NPIPA8P0DM63 369 aa8.94□□□□□ -0.98
PTPRA-202ENST00000318266 HNRNPCL4P0DMR1 293 aa8.94□□□□□ -0.98
PTPRA-202ENST00000318266 GRPRP30550 384 aa8.94□□□□□ -0.98
PTPRA-202ENST00000318266 GDI2P50395 445 aaKnown RBP8.94□□□□□ -0.98
PTPRA-202ENST00000318266 EPHB3P54753 998 aa8.94□□□□□ -0.98
PTPRA-202ENST00000318266 RAG2P55895 527 aa8.94□□□□□ -0.98
PTPRA-202ENST00000318266 H2BFSP57053 126 aa8.94□□□□□ -0.98
PTPRA-202ENST00000318266 DYRK1AQ13627 763 aa8.94□□□□□ -0.98
PTPRA-202ENST00000318266 GK2Q14410 553 aaPredicted RBP8.94□□□□□ -0.98
PTPRA-202ENST00000318266 GLDNQ6ZMI3 551 aaPredicted RBP8.94□□□□□ -0.98
PTPRA-202ENST00000318266 MBOAT2Q6ZWT7 520 aa8.94□□□□□ -0.98
PTPRA-202ENST00000318266 TMCO2Q7Z6W1 182 aaPredicted RBP8.94□□□□□ -0.98
PTPRA-202ENST00000318266 METTL3Q86U44 580 aaKnown RBP8.94□□□□□ -0.98
PTPRA-202ENST00000318266 ZNF547Q8IVP9 402 aa8.94□□□□□ -0.98
PTPRA-202ENST00000318266 CLRN3Q8NCR9 226 aa8.94□□□□□ -0.98
PTPRA-202ENST00000318266 MRPS24Q96EL2 167 aaKnown RBP8.94□□□□□ -0.98
PTPRA-202ENST00000318266 ZDHHC5Q9C0B5 715 aa8.94□□□□□ -0.98
PTPRA-202ENST00000318266 ZNF768Q9H5H4 540 aaKnown RBP8.94□□□□□ -0.98
PTPRA-202ENST00000318266 XKR8Q9H6D3 395 aa8.94□□□□□ -0.98
PTPRA-202ENST00000318266 MRPL17Q9NRX2 175 aaKnown RBP8.94□□□□□ -0.98
PTPRA-202ENST00000318266 TAS2R10Q9NYW0 307 aa8.94□□□□□ -0.98
PTPRA-202ENST00000318266 USP36Q9P275 1121 aaKnown RBP8.94□□□□□ -0.98
PTPRA-202ENST00000318266 ENTPD4Q9Y227 616 aa8.94□□□□□ -0.98
PTPRA-202ENST00000318266 KIF26AQ9ULI4 1882 aaPredicted RBP8.94□□□□□ -0.98
PTPRA-202ENST00000318266 A0A087WV48 116 aa8.93□□□□□ -0.98
PTPRA-202ENST00000318266 A0A1B0GUH1 482 aa8.93□□□□□ -0.98
PTPRA-202ENST00000318266 UNC119BA6NIH7 251 aa8.93□□□□□ -0.98
PTPRA-202ENST00000318266 ZNF98A6NK75 572 aa8.93□□□□□ -0.98
PTPRA-202ENST00000318266 GOSR2O14653 212 aa8.93□□□□□ -0.98
PTPRA-202ENST00000318266 SBK2P0C263 348 aa8.93□□□□□ -0.98
PTPRA-202ENST00000318266 GABRA1P14867 456 aa8.93□□□□□ -0.98
PTPRA-202ENST00000318266 RAB3AP20336 220 aa8.93□□□□□ -0.98
PTPRA-202ENST00000318266 GALP22466 123 aa8.93□□□□□ -0.98
PTPRA-202ENST00000318266 MAT2AP31153 395 aaKnown RBP8.93□□□□□ -0.98
PTPRA-202ENST00000318266 GPR1P46091 355 aa8.93□□□□□ -0.98
PTPRA-202ENST00000318266 RAP2BP61225 183 aa8.93□□□□□ -0.98
PTPRA-202ENST00000318266 BDH1Q02338 343 aa8.93□□□□□ -0.98
PTPRA-202ENST00000318266 TCTN1Q2MV58 587 aa8.93□□□□□ -0.98
PTPRA-202ENST00000318266 DCAF12L2Q5VW00 463 aa8.93□□□□□ -0.98
PTPRA-202ENST00000318266 FAM46CQ5VWP2 391 aa8.93□□□□□ -0.98
PTPRA-202ENST00000318266 WDR88Q6ZMY6 472 aa8.93□□□□□ -0.98
PTPRA-202ENST00000318266 PXKQ7Z7A4 578 aa8.93□□□□□ -0.98
PTPRA-202ENST00000318266 LILRB1Q8NHL6 650 aaPredicted RBP8.93□□□□□ -0.98
PTPRA-202ENST00000318266 ATOH1Q92858 354 aaPredicted RBP8.93□□□□□ -0.98
PTPRA-202ENST00000318266 OTUB2Q96DC9 234 aa8.93□□□□□ -0.98
PTPRA-202ENST00000318266 CD180Q99467 661 aa8.93□□□□□ -0.98
PTPRA-202ENST00000318266 USB1Q9BQ65 265 aaKnown RBP8.93□□□□□ -0.98
PTPRA-202ENST00000318266 ZNF559Q9BR84 538 aa8.93□□□□□ -0.98
PTPRA-202ENST00000318266 GPR174Q9BXC1 333 aa8.93□□□□□ -0.98
PTPRA-202ENST00000318266 BCL2L10Q9HD36 194 aa8.93□□□□□ -0.98
PTPRA-202ENST00000318266 ACSS1Q9NUB1 689 aaPredicted RBP8.93□□□□□ -0.98
PTPRA-202ENST00000318266 SIDT1Q9NXL6 827 aaKnown RBP8.93□□□□□ -0.98
PTPRA-202ENST00000318266 GNG8Q9UK08 70 aa8.93□□□□□ -0.98
PTPRA-202ENST00000318266 NPFFR2Q9Y5X5 522 aa8.93□□□□□ -0.98
PTPRA-202ENST00000318266 ARID1BQ8NFD5 2236 aaPredicted RBP8.93□□□□□ -0.98
PTPRA-202ENST00000318266 IDSB3KWA1 339 aa8.93□□□□□ -0.98
PTPRA-202ENST00000318266 D6RAR5 112 aa8.93□□□□□ -0.98
PTPRA-202ENST00000318266 PYCARD-AS1I3L0S3 204 aa8.93□□□□□ -0.98
PTPRA-202ENST00000318266 CACNB4O00305 520 aaPredicted RBP8.93□□□□□ -0.98
PTPRA-202ENST00000318266 ERI3O43414 337 aaKnown RBP8.93□□□□□ -0.98
PTPRA-202ENST00000318266 GALR3O60755 368 aaPredicted RBP8.93□□□□□ -0.98
PTPRA-202ENST00000318266 GIPP09681 153 aaPredicted RBP8.93□□□□□ -0.98
PTPRA-202ENST00000318266 ACHEP22303 614 aa8.93□□□□□ -0.98
PTPRA-202ENST00000318266 SORDQ00796 357 aa8.93□□□□□ -0.98
PTPRA-202ENST00000318266 OR4C11Q6IEV9 310 aa8.93□□□□□ -0.98
PTPRA-202ENST00000318266 OR7E24Q6IFN5 339 aa8.93□□□□□ -0.98
PTPRA-202ENST00000318266 SLC16A11Q8NCK7 471 aa8.93□□□□□ -0.98
PTPRA-202ENST00000318266 NUP43Q8NFH3 380 aa8.93□□□□□ -0.98
PTPRA-202ENST00000318266 TFGQ92734 400 aaPredicted RBP8.93□□□□□ -0.98
PTPRA-202ENST00000318266 WNT2BQ93097 391 aa8.93□□□□□ -0.98
PTPRA-202ENST00000318266 C12orf57Q99622 126 aa8.93□□□□□ -0.98
PTPRA-202ENST00000318266 ADAT1Q9BUB4 502 aaKnown RBP8.93□□□□□ -0.98
PTPRA-202ENST00000318266 SLC6A15Q9H2J7 730 aa8.93□□□□□ -0.98
PTPRA-202ENST00000318266 IL21Q9HBE4 155 aa8.93□□□□□ -0.98
PTPRA-202ENST00000318266 MED17Q9NVC6 651 aa8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms