RNA–Protein interactions for RNA: ENST00000316048.2

SMCO3-201, Transcript of single-pass membrane protein with coiled-coil domains 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCO3, Length 2,104 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO3-201ENST00000316048 TRPM8Q7Z2W7 1104 aa3.46□□□□□ -1.86
SMCO3-201ENST00000316048 ADCK1Q86TW2 530 aa3.46□□□□□ -1.86
SMCO3-201ENST00000316048 ITIH5Q86UX2 942 aa3.46□□□□□ -1.86
SMCO3-201ENST00000316048 AMZ2Q86W34 360 aa3.46□□□□□ -1.86
SMCO3-201ENST00000316048 KCNMB4Q86W47 210 aa3.46□□□□□ -1.86
SMCO3-201ENST00000316048 NUDCD3Q8IVD9 361 aa3.46□□□□□ -1.86
SMCO3-201ENST00000316048 KLHDC8BQ8IXV7 354 aa3.46□□□□□ -1.86
SMCO3-201ENST00000316048 GPR65Q8IYL9 337 aa3.46□□□□□ -1.86
SMCO3-201ENST00000316048 SLC39A11Q8N1S5 342 aa3.46□□□□□ -1.86
SMCO3-201ENST00000316048 ZNF540Q8NDQ6 660 aa3.46□□□□□ -1.86
SMCO3-201ENST00000316048 OR6M1Q8NGM8 313 aa3.46□□□□□ -1.86
SMCO3-201ENST00000316048 OR10G8Q8NGN5 311 aa3.46□□□□□ -1.86
SMCO3-201ENST00000316048 RAB3IL1Q8TBN0 382 aa3.46□□□□□ -1.86
SMCO3-201ENST00000316048 ZNF689Q96CS4 500 aaPredicted RBP3.46□□□□□ -1.86
SMCO3-201ENST00000316048 OMA1Q96E52 524 aa3.46□□□□□ -1.86
SMCO3-201ENST00000316048 TSNARE1Q96NA8 513 aa3.46□□□□□ -1.86
SMCO3-201ENST00000316048 ZNF599Q96NL3 588 aa3.46□□□□□ -1.86
SMCO3-201ENST00000316048 NKX3-1Q99801 234 aaPredicted RBP3.46□□□□□ -1.86
SMCO3-201ENST00000316048 KIFC1Q9BW19 673 aa3.46□□□□□ -1.86
SMCO3-201ENST00000316048 SLC26A1Q9H2B4 701 aa3.46□□□□□ -1.86
SMCO3-201ENST00000316048 TMEM231Q9H6L2 316 aa3.46□□□□□ -1.86
SMCO3-201ENST00000316048 COQ10BQ9H8M1 238 aa3.46□□□□□ -1.86
SMCO3-201ENST00000316048 CHRAC1Q9NRG0 131 aa3.46□□□□□ -1.86
SMCO3-201ENST00000316048 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP3.46□□□□□ -1.86
SMCO3-201ENST00000316048 C20orf96Q9NUD7 363 aaPredicted RBP3.46□□□□□ -1.86
SMCO3-201ENST00000316048 WDR37Q9Y2I8 494 aa3.46□□□□□ -1.86
SMCO3-201ENST00000316048 N6AMT1Q9Y5N5 214 aa3.46□□□□□ -1.86
SMCO3-201ENST00000316048 USH1CQ9Y6N9 552 aa3.46□□□□□ -1.86
SMCO3-201ENST00000316048 PATJQ8NI35 1801 aa3.45□□□□□ -1.86
SMCO3-201ENST00000316048 PTPRDP23468 1912 aa3.45□□□□□ -1.86
SMCO3-201ENST00000316048 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP3.45□□□□□ -1.86
SMCO3-201ENST00000316048 HEATR9A2RTY3 570 aa3.45□□□□□ -1.86
SMCO3-201ENST00000316048 ZNF840PA6NDX5 716 aa3.45□□□□□ -1.86
SMCO3-201ENST00000316048 ANKRD65E5RJM6 399 aa3.45□□□□□ -1.86
SMCO3-201ENST00000316048 UGT1A9O60656 530 aa3.45□□□□□ -1.86
SMCO3-201ENST00000316048 MAGEC1O60732 1142 aa3.45□□□□□ -1.86
SMCO3-201ENST00000316048 CSO75390 466 aaKnown RBP3.45□□□□□ -1.86
SMCO3-201ENST00000316048 CLDN11O75508 207 aa3.45□□□□□ -1.86
SMCO3-201ENST00000316048 ATP5HO75947 161 aa3.45□□□□□ -1.86
SMCO3-201ENST00000316048 PAK4O96013 591 aaPredicted RBP3.45□□□□□ -1.86
SMCO3-201ENST00000316048 AK1P00568 194 aa3.45□□□□□ -1.86
SMCO3-201ENST00000316048 OAS1P00973 400 aaKnown RBP3.45□□□□□ -1.86
SMCO3-201ENST00000316048 IL1BP01584 269 aa3.45□□□□□ -1.86
SMCO3-201ENST00000316048 IGLV2-11P01706 119 aa3.45□□□□□ -1.86
SMCO3-201ENST00000316048 HLA-DQB2P05538 268 aa3.45□□□□□ -1.86
SMCO3-201ENST00000316048 GSTA1P08263 222 aa3.45□□□□□ -1.86
SMCO3-201ENST00000316048 PRKAR1AP10644 381 aa3.45□□□□□ -1.86
SMCO3-201ENST00000316048 PHEXP78562 749 aa3.45□□□□□ -1.86
SMCO3-201ENST00000316048 PMP22Q01453 160 aa3.45□□□□□ -1.86
SMCO3-201ENST00000316048 ZNF177Q13360 481 aaPredicted RBP3.45□□□□□ -1.86
SMCO3-201ENST00000316048 TMED1Q13445 227 aa3.45□□□□□ -1.86
SMCO3-201ENST00000316048 OR1C1Q15619 314 aa3.45□□□□□ -1.86
SMCO3-201ENST00000316048 ZNF528Q3MIS6 628 aa3.45□□□□□ -1.86
SMCO3-201ENST00000316048 CCDC153Q494R4 210 aa3.45□□□□□ -1.86
SMCO3-201ENST00000316048 HSP90AA5PQ58FG0 334 aa3.45□□□□□ -1.86
SMCO3-201ENST00000316048 PSRC1Q6PGN9 363 aaPredicted RBP3.45□□□□□ -1.86
SMCO3-201ENST00000316048 BHLHB9Q6PI77 547 aa3.45□□□□□ -1.86
SMCO3-201ENST00000316048 FIP1L1Q6UN15 594 aaKnown RBP3.45□□□□□ -1.86
SMCO3-201ENST00000316048 CES3Q6UWW8 571 aa3.45□□□□□ -1.86
SMCO3-201ENST00000316048 RFPL4BQ6ZWI9 263 aa3.45□□□□□ -1.86
SMCO3-201ENST00000316048 ERASQ7Z444 233 aa3.45□□□□□ -1.86
SMCO3-201ENST00000316048 NR2C2APQ86WQ0 139 aa3.45□□□□□ -1.86
SMCO3-201ENST00000316048 HOGA1Q86XE5 327 aa3.45□□□□□ -1.86
SMCO3-201ENST00000316048 CATSPERDQ86XM0 798 aa3.45□□□□□ -1.86
SMCO3-201ENST00000316048 C10orf67Q8IYJ2 551 aa3.45□□□□□ -1.86
SMCO3-201ENST00000316048 ZNF683Q8IZ20 524 aa3.45□□□□□ -1.86
SMCO3-201ENST00000316048 LRRC17Q8N6Y2 441 aa3.45□□□□□ -1.86
SMCO3-201ENST00000316048 RNF148Q8N7C7 305 aa3.45□□□□□ -1.86
SMCO3-201ENST00000316048 RPLP0P6Q8NHW5 317 aa3.45□□□□□ -1.86
SMCO3-201ENST00000316048 GANCQ8TET4 914 aa3.45□□□□□ -1.86
SMCO3-201ENST00000316048 PSMG2Q969U7 264 aa3.45□□□□□ -1.86
SMCO3-201ENST00000316048 IMP4Q96G21 291 aaKnown RBP3.45□□□□□ -1.86
SMCO3-201ENST00000316048 LURAP1Q96LR2 239 aa3.45□□□□□ -1.86
SMCO3-201ENST00000316048 RBBP8Q99708 897 aa3.45□□□□□ -1.86
SMCO3-201ENST00000316048 APOL2Q9BQE5 337 aa3.45□□□□□ -1.86
SMCO3-201ENST00000316048 FICDQ9BVA6 458 aa3.45□□□□□ -1.86
SMCO3-201ENST00000316048 TSSK1BQ9BXA7 367 aa3.45□□□□□ -1.86
SMCO3-201ENST00000316048 POLR1EQ9GZS1 481 aaKnown RBP3.45□□□□□ -1.86
SMCO3-201ENST00000316048 UGT1A7Q9HAW7 530 aa3.45□□□□□ -1.86
SMCO3-201ENST00000316048 UGT1A10Q9HAW8 530 aa3.45□□□□□ -1.86
SMCO3-201ENST00000316048 UGT1A8Q9HAW9 530 aa3.45□□□□□ -1.86
SMCO3-201ENST00000316048 MRM3Q9HC36 420 aaKnown RBP3.45□□□□□ -1.86
SMCO3-201ENST00000316048 S100A14Q9HCY8 104 aa3.45□□□□□ -1.86
SMCO3-201ENST00000316048 NT5MQ9NPB1 228 aa3.45□□□□□ -1.86
SMCO3-201ENST00000316048 YAE1D1Q9NRH1 226 aa3.45□□□□□ -1.86
SMCO3-201ENST00000316048 SLC17A7Q9P2U7 560 aa3.45□□□□□ -1.86
SMCO3-201ENST00000316048 EPS15L1Q9UBC2 864 aa3.45□□□□□ -1.86
SMCO3-201ENST00000316048 NEU3Q9UQ49 428 aa3.45□□□□□ -1.86
SMCO3-201ENST00000316048 ASB3Q9Y575 518 aa3.45□□□□□ -1.86
SMCO3-201ENST00000316048 FAM25EA8MYX2 175 aa3.44□□□□□ -1.86
SMCO3-201ENST00000316048 COCHO43405 550 aa3.44□□□□□ -1.86
SMCO3-201ENST00000316048 KDELR3O43731 214 aa3.44□□□□□ -1.86
SMCO3-201ENST00000316048 TLX2O43763 284 aaPredicted RBP3.44□□□□□ -1.86
SMCO3-201ENST00000316048 NME2P1O60361 137 aa3.44□□□□□ -1.86
SMCO3-201ENST00000316048 LYNP07948 512 aa3.44□□□□□ -1.86
SMCO3-201ENST00000316048 GNB3P16520 340 aa3.44□□□□□ -1.86
SMCO3-201ENST00000316048 HMGA1P17096 107 aaKnown RBP3.44□□□□□ -1.86
SMCO3-201ENST00000316048 CA8P35219 290 aa3.44□□□□□ -1.86
SMCO3-201ENST00000316048 ADRA1AP35348 466 aa3.44□□□□□ -1.86
SMCO3-201ENST00000316048 SERPINB8P50452 374 aa3.44□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms