RNA–Protein interactions for RNA: ENST00000315285.7

SPAST-201, Transcript of spastin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SPAST, Length 5,117 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-201ENST00000315285 TCRBV5S2A0A599 114 aa12.85□□□□□ -0.35
SPAST-201ENST00000315285 ZNF705EA8MWA4 302 aaPredicted RBP12.85□□□□□ -0.35
SPAST-201ENST00000315285 I6L893 689 aaPredicted RBP12.85□□□□□ -0.35
SPAST-201ENST00000315285 MPIG6BO95866 241 aa12.85□□□□□ -0.35
SPAST-201ENST00000315285 GPR50Q13585 617 aa12.85□□□□□ -0.35
SPAST-201ENST00000315285 DUSP7Q16829 419 aa12.85□□□□□ -0.35
SPAST-201ENST00000315285 ATAD3CQ5T2N8 411 aa12.85□□□□□ -0.35
SPAST-201ENST00000315285 LAS2Q8IYD9 372 aa12.85□□□□□ -0.35
SPAST-201ENST00000315285 GPR137CQ8N3F9 429 aa12.85□□□□□ -0.35
SPAST-201ENST00000315285 MFSD8Q8NHS3 518 aa12.85□□□□□ -0.35
SPAST-201ENST00000315285 TAAR2Q9P1P5 351 aa12.85□□□□□ -0.35
SPAST-201ENST00000315285 FAM155AB1AL88 458 aaPredicted RBP12.85□□□□□ -0.35
SPAST-201ENST00000315285 SLC16A7O60669 478 aa12.85□□□□□ -0.35
SPAST-201ENST00000315285 TMEM225BP0DP42 221 aa12.85□□□□□ -0.35
SPAST-201ENST00000315285 RGS19P49795 217 aa12.85□□□□□ -0.35
SPAST-201ENST00000315285 SQSTM1Q13501 440 aa12.85□□□□□ -0.35
SPAST-201ENST00000315285 ARL6IP1Q15041 203 aa12.85□□□□□ -0.35
SPAST-201ENST00000315285 SLC35F3Q8IY50 421 aa12.85□□□□□ -0.35
SPAST-201ENST00000315285 GALNT6Q8NCL4 622 aa12.85□□□□□ -0.35
SPAST-201ENST00000315285 HDAC8Q9BY41 377 aa12.85□□□□□ -0.35
SPAST-201ENST00000315285 RANGRFQ9HD47 186 aaPredicted RBP12.85□□□□□ -0.35
SPAST-201ENST00000315285 FTSJ1Q9UET6 329 aa12.85□□□□□ -0.35
SPAST-201ENST00000315285 WASF3Q9UPY6 502 aa12.85□□□□□ -0.35
SPAST-201ENST00000315285 CPNE6O95741 557 aa12.84□□□□□ -0.35
SPAST-201ENST00000315285 B3GALT4O96024 378 aa12.84□□□□□ -0.35
SPAST-201ENST00000315285 PRKAR1BP31321 381 aa12.84□□□□□ -0.35
SPAST-201ENST00000315285 UQCRC1P31930 480 aa12.84□□□□□ -0.35
SPAST-201ENST00000315285 SFTPDP35247 375 aa12.84□□□□□ -0.35
SPAST-201ENST00000315285 ACY1Q03154 408 aa12.84□□□□□ -0.35
SPAST-201ENST00000315285 HBMQ6B0K9 141 aa12.84□□□□□ -0.35
SPAST-201ENST00000315285 GPR139Q6DWJ6 353 aa12.84□□□□□ -0.35
SPAST-201ENST00000315285 ZSCAN4Q8NAM6 433 aaPredicted RBP12.84□□□□□ -0.35
SPAST-201ENST00000315285 SIMC1Q8NDZ2 872 aa12.84□□□□□ -0.35
SPAST-201ENST00000315285 NINJ1Q92982 152 aa12.84□□□□□ -0.35
SPAST-201ENST00000315285 TBC1D20Q96BZ9 403 aa12.84□□□□□ -0.35
SPAST-201ENST00000315285 FAM71F1Q96KD3 344 aaPredicted RBP12.84□□□□□ -0.35
SPAST-201ENST00000315285 IKZF5Q9H5V7 419 aa12.84□□□□□ -0.35
SPAST-201ENST00000315285 RLIMQ9NVW2 624 aa12.84□□□□□ -0.35
SPAST-201ENST00000315285 ATG4BQ9Y4P1 393 aa12.84□□□□□ -0.35
SPAST-201ENST00000315285 A3GALT2U3KPV4 340 aa12.84□□□□□ -0.35
SPAST-201ENST00000315285 CROCCQ5TZA2 2017 aa12.84□□□□□ -0.35
SPAST-201ENST00000315285 MEIS3P1A6NDR6 274 aa12.84□□□□□ -0.35
SPAST-201ENST00000315285 ARSBP15848 533 aa12.84□□□□□ -0.35
SPAST-201ENST00000315285 HTRA3P83110 453 aa12.84□□□□□ -0.35
SPAST-201ENST00000315285 ABHD17CQ6PCB6 329 aa12.84□□□□□ -0.35
SPAST-201ENST00000315285 OLIG3Q7RTU3 272 aa12.84□□□□□ -0.35
SPAST-201ENST00000315285 BEST4Q8NFU0 473 aa12.84□□□□□ -0.35
SPAST-201ENST00000315285 OR52I1Q8NGK6 324 aa12.84□□□□□ -0.35
SPAST-201ENST00000315285 STRADBQ9C0K7 418 aa12.84□□□□□ -0.35
SPAST-201ENST00000315285 TM7SF3Q9NS93 570 aa12.84□□□□□ -0.35
SPAST-201ENST00000315285 B4GALT7Q9UBV7 327 aa12.84□□□□□ -0.35
SPAST-201ENST00000315285 KIAA0100Q14667 2235 aaKnown RBP12.84□□□□□ -0.35
SPAST-201ENST00000315285 SPDEFO95238 335 aa12.84□□□□□ -0.35
SPAST-201ENST00000315285 APEX1P27695 318 aaKnown RBP12.84□□□□□ -0.35
SPAST-201ENST00000315285 ERV3-1Q14264 604 aa12.84□□□□□ -0.35
SPAST-201ENST00000315285 RSU1Q15404 277 aa12.84□□□□□ -0.35
SPAST-201ENST00000315285 ELP2Q6IA86 826 aa12.84□□□□□ -0.35
SPAST-201ENST00000315285 TANGO2Q6ICL3 276 aa12.84□□□□□ -0.35
SPAST-201ENST00000315285 SLC48A1Q6P1K1 146 aa12.84□□□□□ -0.35
SPAST-201ENST00000315285 TMEM168Q9H0V1 697 aa12.84□□□□□ -0.35
SPAST-201ENST00000315285 KLF15Q9UIH9 416 aa12.84□□□□□ -0.35
SPAST-201ENST00000315285 NDRG4Q9ULP0 352 aaKnown RBP12.84□□□□□ -0.35
SPAST-201ENST00000315285 HHLA2Q9UM44 414 aa12.84□□□□□ -0.35
SPAST-201ENST00000315285 RCE1Q9Y256 329 aa12.84□□□□□ -0.35
SPAST-201ENST00000315285 A0A1B0GTL3 188 aa12.84□□□□□ -0.35
SPAST-201ENST00000315285 FZD7O75084 574 aa12.84□□□□□ -0.35
SPAST-201ENST00000315285 CSNK2A1P68400 391 aaPredicted RBP12.84□□□□□ -0.35
SPAST-201ENST00000315285 TMEM52BQ4KMG9 183 aa12.84□□□□□ -0.35
SPAST-201ENST00000315285 LINC00299Q6ZSB3 139 aa12.84□□□□□ -0.35
SPAST-201ENST00000315285 PLPP6Q8IY26 295 aa12.84□□□□□ -0.35
SPAST-201ENST00000315285 ARL14Q8N4G2 192 aa12.84□□□□□ -0.35
SPAST-201ENST00000315285 CSNK2A3Q8NEV1 391 aa12.84□□□□□ -0.35
SPAST-201ENST00000315285 CDC6Q99741 560 aa12.84□□□□□ -0.35
SPAST-201ENST00000315285 CRB3Q9BUF7 120 aa12.84□□□□□ -0.35
SPAST-201ENST00000315285 GON7Q9BXV9 100 aa12.84□□□□□ -0.35
SPAST-201ENST00000315285 NOX3Q9HBY0 568 aa12.84□□□□□ -0.35
SPAST-201ENST00000315285 RBFOX1Q9NWB1 397 aaKnown RBP12.84□□□□□ -0.35
SPAST-201ENST00000315285 CLEC2DQ9UHP7 191 aa12.84□□□□□ -0.35
SPAST-201ENST00000315285 ARID1BQ8NFD5 2236 aaPredicted RBP12.83□□□□□ -0.35
SPAST-201ENST00000315285 DIRAS3O95661 229 aa12.83□□□□□ -0.35
SPAST-201ENST00000315285 FUCA1P04066 466 aa12.83□□□□□ -0.35
SPAST-201ENST00000315285 DCNP07585 359 aaKnown RBP12.83□□□□□ -0.35
SPAST-201ENST00000315285 HBQ1P09105 142 aa12.83□□□□□ -0.35
SPAST-201ENST00000315285 RAB38P57729 211 aa12.83□□□□□ -0.35
SPAST-201ENST00000315285 RHEBQ15382 184 aa12.83□□□□□ -0.35
SPAST-201ENST00000315285 OR7A5Q15622 319 aa12.83□□□□□ -0.35
SPAST-201ENST00000315285 LYSMD2Q8IV50 215 aa12.83□□□□□ -0.35
SPAST-201ENST00000315285 OR2M2Q96R28 347 aa12.83□□□□□ -0.35
SPAST-201ENST00000315285 TNFRSF13CQ96RJ3 184 aa12.83□□□□□ -0.35
SPAST-201ENST00000315285 APMAPQ9HDC9 416 aa12.83□□□□□ -0.35
SPAST-201ENST00000315285 ZNF281Q9Y2X9 895 aa12.83□□□□□ -0.35
SPAST-201ENST00000315285 BLACEA4D250 179 aa12.83□□□□□ -0.36
SPAST-201ENST00000315285 F13BP05160 661 aa12.83□□□□□ -0.36
SPAST-201ENST00000315285 SNRPGP62308 76 aaKnown RBP12.83□□□□□ -0.36
SPAST-201ENST00000315285 ZNF750Q32MQ0 723 aa12.83□□□□□ -0.36
SPAST-201ENST00000315285 HSF5Q4G112 596 aaPredicted RBP12.83□□□□□ -0.36
SPAST-201ENST00000315285 TMEM244Q5VVB8 128 aa12.83□□□□□ -0.36
SPAST-201ENST00000315285 FCRLAQ7L513 359 aa12.83□□□□□ -0.36
SPAST-201ENST00000315285 GTPBP8Q8N3Z3 284 aaPredicted RBP12.83□□□□□ -0.36
SPAST-201ENST00000315285 MFFQ9GZY8 342 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms