RNA–Protein interactions for RNA: ENST00000315249.11

RFFL-201, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RFFL, Length 7,293 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-201ENST00000315249 ZNF578Q96N58 590 aaPredicted RBP12.57□□□□□ -0.4
RFFL-201ENST00000315249 FXYD6Q9H0Q3 95 aa12.57□□□□□ -0.4
RFFL-201ENST00000315249 NUDT15Q9NV35 164 aa12.57□□□□□ -0.4
RFFL-201ENST00000315249 SCGB2A1O75556 95 aa12.57□□□□□ -0.4
RFFL-201ENST00000315249 ZNF44P15621 663 aa12.57□□□□□ -0.4
RFFL-201ENST00000315249 ALG8Q9BVK2 526 aa12.57□□□□□ -0.4
RFFL-201ENST00000315249 ACSS1Q9NUB1 689 aaPredicted RBP12.57□□□□□ -0.4
RFFL-201ENST00000315249 PLEKHJ1Q9NW61 149 aa12.57□□□□□ -0.4
RFFL-201ENST00000315249 LRFN1Q9P244 771 aa12.57□□□□□ -0.4
RFFL-201ENST00000315249 ADAM29Q9UKF5 820 aa12.57□□□□□ -0.4
RFFL-201ENST00000315249 KANTRA0A1W2PQU2 76 aa12.57□□□□□ -0.4
RFFL-201ENST00000315249 ARHGAP33O14559 1287 aa12.57□□□□□ -0.4
RFFL-201ENST00000315249 MITFO75030 526 aaPredicted RBP12.57□□□□□ -0.4
RFFL-201ENST00000315249 PSMB10P40306 273 aa12.57□□□□□ -0.4
RFFL-201ENST00000315249 EEF1AKMT2Q5JPI9 291 aaKnown RBP12.57□□□□□ -0.4
RFFL-201ENST00000315249 SLC6A19Q695T7 634 aa12.57□□□□□ -0.4
RFFL-201ENST00000315249 OR2I1PQ8NGU4 316 aa12.57□□□□□ -0.4
RFFL-201ENST00000315249 VRK1Q99986 396 aaPredicted RBP12.57□□□□□ -0.4
RFFL-201ENST00000315249 FAM183AA6NL82 134 aa12.56□□□□□ -0.4
RFFL-201ENST00000315249 C12orf71A8MTZ7 269 aa12.56□□□□□ -0.4
RFFL-201ENST00000315249 ZNF587BE7ETH6 402 aa12.56□□□□□ -0.4
RFFL-201ENST00000315249 B4GAT1O43505 415 aa12.56□□□□□ -0.4
RFFL-201ENST00000315249 RFC3P40938 356 aa12.56□□□□□ -0.4
RFFL-201ENST00000315249 HTRA4P83105 476 aaPredicted RBP12.56□□□□□ -0.4
RFFL-201ENST00000315249 ASTLQ6HA08 431 aaPredicted RBP12.56□□□□□ -0.4
RFFL-201ENST00000315249 SLC30A2Q9BRI3 323 aa12.56□□□□□ -0.4
RFFL-201ENST00000315249 UBE2J1Q9Y385 318 aaPredicted RBP12.56□□□□□ -0.4
RFFL-201ENST00000315249 SEC16AO15027 2179 aa12.56□□□□□ -0.4
RFFL-201ENST00000315249 CHRNB4P30926 498 aa12.56□□□□□ -0.4
RFFL-201ENST00000315249 SLC35A1P78382 337 aa12.56□□□□□ -0.4
RFFL-201ENST00000315249 KHSRPQ92945 711 aaKnown RBP eCLIP12.56□□□□□ -0.4
RFFL-201ENST00000315249 TREX2Q9BQ50 279 aaPredicted RBP12.56□□□□□ -0.4
RFFL-201ENST00000315249 KRBA1A5PL33 1030 aa12.56□□□□□ -0.4
RFFL-201ENST00000315249 SERINC4A6NH21 518 aa12.56□□□□□ -0.4
RFFL-201ENST00000315249 CBFA2T3O75081 653 aa12.56□□□□□ -0.4
RFFL-201ENST00000315249 MPIG6BO95866 241 aa12.56□□□□□ -0.4
RFFL-201ENST00000315249 NPPBP16860 134 aa12.56□□□□□ -0.4
RFFL-201ENST00000315249 MAGEA3P43357 314 aa12.56□□□□□ -0.4
RFFL-201ENST00000315249 PPIAP62937 165 aaKnown RBP12.56□□□□□ -0.4
RFFL-201ENST00000315249 MENTQ9BUN1 341 aa12.56□□□□□ -0.4
RFFL-201ENST00000315249 C1QTNF6Q9BXI9 259 aa12.56□□□□□ -0.4
RFFL-201ENST00000315249 IL21Q9HBE4 155 aa12.56□□□□□ -0.4
RFFL-201ENST00000315249 AKR1C2P52895 323 aa12.56□□□□□ -0.4
RFFL-201ENST00000315249 LIM2P55344 173 aa12.56□□□□□ -0.4
RFFL-201ENST00000315249 PDE7AQ13946 482 aa12.56□□□□□ -0.4
RFFL-201ENST00000315249 AGBL4Q5VU57 503 aa12.56□□□□□ -0.4
RFFL-201ENST00000315249 LSM14AQ8ND56 463 aaKnown RBP12.56□□□□□ -0.4
RFFL-201ENST00000315249 STT3BQ8TCJ2 826 aa12.56□□□□□ -0.4
RFFL-201ENST00000315249 CLMPQ9H6B4 373 aa12.56□□□□□ -0.4
RFFL-201ENST00000315249 LAMB2P55268 1798 aa12.56□□□□□ -0.4
RFFL-201ENST00000315249 SCN4AP35499 1836 aa12.56□□□□□ -0.4
RFFL-201ENST00000315249 ICE1Q9Y2F5 2266 aa12.56□□□□□ -0.4
RFFL-201ENST00000315249 STMND1H3BQB6 276 aa12.56□□□□□ -0.4
RFFL-201ENST00000315249 UCHL1P09936 223 aa12.56□□□□□ -0.4
RFFL-201ENST00000315249 OPRD1P41143 372 aa12.56□□□□□ -0.4
RFFL-201ENST00000315249 PFN3P60673 137 aa12.56□□□□□ -0.4
RFFL-201ENST00000315249 COQ5Q5HYK3 327 aa12.56□□□□□ -0.4
RFFL-201ENST00000315249 C6orf141Q5SZD1 244 aa12.56□□□□□ -0.4
RFFL-201ENST00000315249 HES5Q5TA89 166 aa12.56□□□□□ -0.4
RFFL-201ENST00000315249 FAM57BQ71RH2 274 aa12.56□□□□□ -0.4
RFFL-201ENST00000315249 SERPINA11Q86U17 422 aa12.56□□□□□ -0.4
RFFL-201ENST00000315249 IL1F10Q8WWZ1 152 aa12.56□□□□□ -0.4
RFFL-201ENST00000315249 TRIB1Q96RU8 372 aa12.56□□□□□ -0.4
RFFL-201ENST00000315249 MGLLQ99685 303 aa12.56□□□□□ -0.4
RFFL-201ENST00000315249 HIF3AQ9Y2N7 669 aa12.56□□□□□ -0.4
RFFL-201ENST00000315249 OR51B4Q9Y5P0 310 aa12.56□□□□□ -0.4
RFFL-201ENST00000315249 B3GALT1Q9Y5Z6 326 aa12.56□□□□□ -0.4
RFFL-201ENST00000315249 ARAP2Q8WZ64 1704 aa12.56□□□□□ -0.4
RFFL-201ENST00000315249 TPRP12270 2363 aaKnown RBP12.56□□□□□ -0.4
RFFL-201ENST00000315249 MSL3P1P0C860 447 aa12.56□□□□□ -0.4
RFFL-201ENST00000315249 ZNF12P17014 697 aa12.56□□□□□ -0.4
RFFL-201ENST00000315249 GPX3P22352 226 aa12.56□□□□□ -0.4
RFFL-201ENST00000315249 CD97P48960 835 aa12.56□□□□□ -0.4
RFFL-201ENST00000315249 TUBA3CQ13748 450 aa12.56□□□□□ -0.4
RFFL-201ENST00000315249 ATXN7L3Q14CW9 347 aaPredicted RBP12.56□□□□□ -0.4
RFFL-201ENST00000315249 PIGGQ5H8A4 983 aa12.56□□□□□ -0.4
RFFL-201ENST00000315249 IL17RDQ8NFM7 739 aa12.56□□□□□ -0.4
RFFL-201ENST00000315249 TUBA8Q9NY65 449 aaPredicted RBP12.56□□□□□ -0.4
RFFL-201ENST00000315249 GPR45Q9Y5Y3 372 aa12.56□□□□□ -0.4
RFFL-201ENST00000315249 J3KTA2 159 aa12.55□□□□□ -0.4
RFFL-201ENST00000315249 DPTQ07507 201 aa12.55□□□□□ -0.4
RFFL-201ENST00000315249 SLC10A1Q14973 349 aa12.55□□□□□ -0.4
RFFL-201ENST00000315249 SCGB1C1Q8TD33 95 aa12.55□□□□□ -0.4
RFFL-201ENST00000315249 GLIPR2Q9H4G4 154 aa12.55□□□□□ -0.4
RFFL-201ENST00000315249 LRIT2A6NDA9 550 aa12.55□□□□□ -0.4
RFFL-201ENST00000315249 HSPB6O14558 160 aa12.55□□□□□ -0.4
RFFL-201ENST00000315249 CXCR4P61073 352 aa12.55□□□□□ -0.4
RFFL-201ENST00000315249 ZNF704Q6ZNC4 412 aaPredicted RBP12.55□□□□□ -0.4
RFFL-201ENST00000315249 CENPSQ8N2Z9 138 aa12.55□□□□□ -0.4
RFFL-201ENST00000315249 TMEM151AQ8N4L1 468 aa12.55□□□□□ -0.4
RFFL-201ENST00000315249 TM4SF18Q96CE8 201 aa12.55□□□□□ -0.4
RFFL-201ENST00000315249 H7C417 338 aa12.55□□□□□ -0.4
RFFL-201ENST00000315249 CBX7O95931 251 aa12.55□□□□□ -0.4
RFFL-201ENST00000315249 SLC35E2P0CK97 266 aa12.55□□□□□ -0.4
RFFL-201ENST00000315249 SLC22A6Q4U2R8 563 aa12.55□□□□□ -0.4
RFFL-201ENST00000315249 GUSBP11Q6P575 273 aa12.55□□□□□ -0.4
RFFL-201ENST00000315249 LSMEM2Q8N112 164 aa12.55□□□□□ -0.4
RFFL-201ENST00000315249 OR6Q1Q8NGQ2 317 aa12.55□□□□□ -0.4
RFFL-201ENST00000315249 HDAC2Q92769 488 aaKnown RBP12.55□□□□□ -0.4
RFFL-201ENST00000315249 ST6GALNAC5Q9BVH7 336 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 195.8 ms