RNA–Protein interactions for RNA: ENST00000312989.11

PPP1CA-201, Transcript of protein phosphatase 1 catalytic subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene PPP1CA, Length 1,389 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1CA-201ENST00000312989 RGNQ15493 299 aa12.99□□□□□ -0.33
PPP1CA-201ENST00000312989 SYT14P1Q58G82 188 aa12.99□□□□□ -0.33
PPP1CA-201ENST00000312989 MRPL2Q5T653 305 aaKnown RBP12.99□□□□□ -0.33
PPP1CA-201ENST00000312989 ABLIM2Q6H8Q1 611 aa12.99□□□□□ -0.33
PPP1CA-201ENST00000312989 ZNF836Q6ZNA1 936 aa12.99□□□□□ -0.33
PPP1CA-201ENST00000312989 FCRLAQ7L513 359 aa12.99□□□□□ -0.33
PPP1CA-201ENST00000312989 ZNF550Q7Z398 422 aa12.99□□□□□ -0.33
PPP1CA-201ENST00000312989 GRINAQ7Z429 371 aa12.99□□□□□ -0.33
PPP1CA-201ENST00000312989 VRK2Q86Y07 508 aa12.99□□□□□ -0.33
PPP1CA-201ENST00000312989 TUSC5Q8IXB3 177 aa12.99□□□□□ -0.33
PPP1CA-201ENST00000312989 GABRG1Q8N1C3 465 aa12.99□□□□□ -0.33
PPP1CA-201ENST00000312989 PMM1Q92871 262 aa12.99□□□□□ -0.33
PPP1CA-201ENST00000312989 NINJ1Q92982 152 aa12.99□□□□□ -0.33
PPP1CA-201ENST00000312989 TMEM19Q96HH6 336 aa12.99□□□□□ -0.33
PPP1CA-201ENST00000312989 ARL5BQ96KC2 179 aa12.99□□□□□ -0.33
PPP1CA-201ENST00000312989 HS3ST6Q96QI5 342 aa12.99□□□□□ -0.33
PPP1CA-201ENST00000312989 PRRG4Q9BZD6 226 aa12.99□□□□□ -0.33
PPP1CA-201ENST00000312989 RMND5AQ9H871 391 aa12.99□□□□□ -0.33
PPP1CA-201ENST00000312989 MTHFD2LQ9H903 347 aaPredicted RBP12.99□□□□□ -0.33
PPP1CA-201ENST00000312989 GP6Q9HCN6 339 aa12.99□□□□□ -0.33
PPP1CA-201ENST00000312989 VAPAQ9P0L0 249 aa12.99□□□□□ -0.33
PPP1CA-201ENST00000312989 P2RX2Q9UBL9 471 aa12.99□□□□□ -0.33
PPP1CA-201ENST00000312989 ITGB1BP2Q9UKP3 347 aa12.99□□□□□ -0.33
PPP1CA-201ENST00000312989 EMC9Q9Y3B6 208 aa12.99□□□□□ -0.33
PPP1CA-201ENST00000312989 F8P00451 2351 aa12.98□□□□□ -0.33
PPP1CA-201ENST00000312989 GJE1A6NN92 205 aa12.98□□□□□ -0.33
PPP1CA-201ENST00000312989 ZNF814B7Z6K7 855 aa12.98□□□□□ -0.33
PPP1CA-201ENST00000312989 C16orf97H3BN30 126 aa12.98□□□□□ -0.33
PPP1CA-201ENST00000312989 CYTIPO60759 359 aa12.98□□□□□ -0.33
PPP1CA-201ENST00000312989 BCHEP06276 602 aa12.98□□□□□ -0.33
PPP1CA-201ENST00000312989 NR2F1P10589 423 aa12.98□□□□□ -0.33
PPP1CA-201ENST00000312989 CRYGSP22914 178 aa12.98□□□□□ -0.33
PPP1CA-201ENST00000312989 RYKP34925 604 aa12.98□□□□□ -0.33
PPP1CA-201ENST00000312989 APOBEC1P41238 236 aaKnown RBP12.98□□□□□ -0.33
PPP1CA-201ENST00000312989 DIO1P49895 249 aa12.98□□□□□ -0.33
PPP1CA-201ENST00000312989 DSTNP60981 165 aa12.98□□□□□ -0.33
PPP1CA-201ENST00000312989 HPCAP84074 193 aa12.98□□□□□ -0.33
PPP1CA-201ENST00000312989 EPS8Q12929 822 aa12.98□□□□□ -0.33
PPP1CA-201ENST00000312989 POU4F3Q15319 338 aa12.98□□□□□ -0.33
PPP1CA-201ENST00000312989 C6orf10Q5SRN2 563 aa12.98□□□□□ -0.33
PPP1CA-201ENST00000312989 PDSS1Q5T2R2 415 aa12.98□□□□□ -0.33
PPP1CA-201ENST00000312989 PPP4R4Q6NUP7 873 aa12.98□□□□□ -0.33
PPP1CA-201ENST00000312989 PAMR1Q6UXH9 720 aa12.98□□□□□ -0.33
PPP1CA-201ENST00000312989 TMPPEQ6ZT21 453 aa12.98□□□□□ -0.33
PPP1CA-201ENST00000312989 COMTD1Q86VU5 262 aa12.98□□□□□ -0.33
PPP1CA-201ENST00000312989 WDR60Q8WVS4 1066 aa12.98□□□□□ -0.33
PPP1CA-201ENST00000312989 TMEM234Q8WY98 164 aa12.98□□□□□ -0.33
PPP1CA-201ENST00000312989 SPDL1Q96EA4 605 aa12.98□□□□□ -0.33
PPP1CA-201ENST00000312989 OR11A1Q9GZK7 315 aa12.98□□□□□ -0.33
PPP1CA-201ENST00000312989 A4GALTQ9NPC4 353 aa12.98□□□□□ -0.33
PPP1CA-201ENST00000312989 ARGLU1Q9NWB6 273 aaPredicted RBP12.98□□□□□ -0.33
PPP1CA-201ENST00000312989 TMEM45AQ9NWC5 275 aa12.98□□□□□ -0.33
PPP1CA-201ENST00000312989 CCDC167Q9P0B6 97 aa12.98□□□□□ -0.33
PPP1CA-201ENST00000312989 C6orf203Q9P0P8 240 aaPredicted RBP12.98□□□□□ -0.33
PPP1CA-201ENST00000312989 HEATR5AQ86XA9 2040 aa12.98□□□□□ -0.33
PPP1CA-201ENST00000312989 ZNF716A6NP11 495 aa12.97□□□□□ -0.33
PPP1CA-201ENST00000312989 CLIC1O00299 241 aa12.97□□□□□ -0.33
PPP1CA-201ENST00000312989 RAMP1O60894 148 aa12.97□□□□□ -0.33
PPP1CA-201ENST00000312989 ATE1O95260 518 aa12.97□□□□□ -0.33
PPP1CA-201ENST00000312989 DBIP07108 87 aaKnown RBP12.97□□□□□ -0.33
PPP1CA-201ENST00000312989 PRG2P13727 222 aa12.97□□□□□ -0.33
PPP1CA-201ENST00000312989 PSMB1P20618 241 aaKnown RBP12.97□□□□□ -0.33
PPP1CA-201ENST00000312989 NTF4P34130 210 aa12.97□□□□□ -0.33
PPP1CA-201ENST00000312989 CRATP43155 626 aa12.97□□□□□ -0.33
PPP1CA-201ENST00000312989 IDH2P48735 452 aaKnown RBP12.97□□□□□ -0.33
PPP1CA-201ENST00000312989 ANXA11P50995 505 aaKnown RBP12.97□□□□□ -0.33
PPP1CA-201ENST00000312989 H3F3AP84243 136 aa12.97□□□□□ -0.33
PPP1CA-201ENST00000312989 RNPS1Q15287 305 aaKnown RBP12.97□□□□□ -0.33
PPP1CA-201ENST00000312989 RNF220Q5VTB9 566 aa12.97□□□□□ -0.33
PPP1CA-201ENST00000312989 CGB2Q6NT52 195 aa12.97□□□□□ -0.33
PPP1CA-201ENST00000312989 SEZ6L2Q6UXD5 910 aa12.97□□□□□ -0.33
PPP1CA-201ENST00000312989 DLEU7Q6UYE1 221 aa12.97□□□□□ -0.33
PPP1CA-201ENST00000312989 CLIP4Q8N3C7 705 aa12.97□□□□□ -0.33
PPP1CA-201ENST00000312989 ARFGAP2Q8N6H7 521 aa12.97□□□□□ -0.33
PPP1CA-201ENST00000312989 SLC25A43Q8WUT9 341 aaPredicted RBP12.97□□□□□ -0.33
PPP1CA-201ENST00000312989 MAL2Q969L2 176 aa12.97□□□□□ -0.33
PPP1CA-201ENST00000312989 THOC1Q96FV9 657 aaKnown RBP12.97□□□□□ -0.33
PPP1CA-201ENST00000312989 OR5B2Q96R09 309 aa12.97□□□□□ -0.33
PPP1CA-201ENST00000312989 ZNF300Q96RE9 604 aaPredicted RBP12.97□□□□□ -0.33
PPP1CA-201ENST00000312989 SLC39A3Q9BRY0 314 aa12.97□□□□□ -0.33
PPP1CA-201ENST00000312989 ADAM19Q9H013 955 aa12.97□□□□□ -0.33
PPP1CA-201ENST00000312989 C12orf49Q9H741 205 aa12.97□□□□□ -0.33
PPP1CA-201ENST00000312989 BCL2L10Q9HD36 194 aa12.97□□□□□ -0.33
PPP1CA-201ENST00000312989 CCM2LQ9NUG4 571 aaPredicted RBP12.97□□□□□ -0.33
PPP1CA-201ENST00000312989 CHRNA9Q9UGM1 479 aa12.97□□□□□ -0.33
PPP1CA-201ENST00000312989 OSGIN1Q9UJX0 560 aa12.97□□□□□ -0.33
PPP1CA-201ENST00000312989 TMEM72A0PK05 275 aa12.96□□□□□ -0.33
PPP1CA-201ENST00000312989 ZC3H12DA2A288 527 aaKnown RBP12.96□□□□□ -0.33
PPP1CA-201ENST00000312989 NR5A2O00482 541 aa12.96□□□□□ -0.33
PPP1CA-201ENST00000312989 KLF4O43474 513 aa12.96□□□□□ -0.33
PPP1CA-201ENST00000312989 PLGP00747 810 aaPredicted RBP12.96□□□□□ -0.33
PPP1CA-201ENST00000312989 FESP07332 822 aa12.96□□□□□ -0.33
PPP1CA-201ENST00000312989 THBS1P07996 1170 aa12.96□□□□□ -0.33
PPP1CA-201ENST00000312989 IMPDH2P12268 514 aa12.96□□□□□ -0.33
PPP1CA-201ENST00000312989 SLC7A1P30825 629 aa12.96□□□□□ -0.33
PPP1CA-201ENST00000312989 CRISP3P54108 245 aa12.96□□□□□ -0.33
PPP1CA-201ENST00000312989 CTBP2P56545 445 aa12.96□□□□□ -0.33
PPP1CA-201ENST00000312989 STX1BP61266 288 aa12.96□□□□□ -0.33
PPP1CA-201ENST00000312989 SQLEQ14534 574 aa12.96□□□□□ -0.33
PPP1CA-201ENST00000312989 EXOC3L2Q2M3D2 409 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms