RNA–Protein interactions for RNA: ENST00000309660.9

PTPN2-201, Transcript of protein tyrosine phosphatase, non-receptor type 2, humanhuman

TSL 1 (best) BASIC

Gene PTPN2, Length 3,467 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN2-201ENST00000309660 SLC22A31A6NKX4 558 aa10.64□□□□□ -0.71
PTPN2-201ENST00000309660 IMPA2O14732 288 aa10.64□□□□□ -0.71
PTPN2-201ENST00000309660 NKX2-2O95096 273 aa10.64□□□□□ -0.71
PTPN2-201ENST00000309660 AK1P00568 194 aa10.64□□□□□ -0.71
PTPN2-201ENST00000309660 MLLT3P42568 568 aaPredicted RBP10.64□□□□□ -0.71
PTPN2-201ENST00000309660 HTR3AP46098 478 aa10.64□□□□□ -0.71
PTPN2-201ENST00000309660 TBRG1Q3YBR2 411 aa10.64□□□□□ -0.71
PTPN2-201ENST00000309660 GARNL3Q5VVW2 1013 aa10.64□□□□□ -0.71
PTPN2-201ENST00000309660 C17orf47Q8NEP4 570 aa10.64□□□□□ -0.71
PTPN2-201ENST00000309660 OR5M3Q8NGP4 307 aa10.64□□□□□ -0.71
PTPN2-201ENST00000309660 SMPDL3BQ92485 455 aa10.64□□□□□ -0.71
PTPN2-201ENST00000309660 FAM210AQ96ND0 272 aa10.64□□□□□ -0.71
PTPN2-201ENST00000309660 WDFY2Q96P53 400 aa10.64□□□□□ -0.71
PTPN2-201ENST00000309660 GFM1Q96RP9 751 aaKnown RBP10.64□□□□□ -0.71
PTPN2-201ENST00000309660 EXTL2Q9UBQ6 330 aa10.64□□□□□ -0.71
PTPN2-201ENST00000309660 CA14Q9ULX7 337 aa10.64□□□□□ -0.71
PTPN2-201ENST00000309660 TMEM5Q9Y2B1 443 aa10.64□□□□□ -0.71
PTPN2-201ENST00000309660 SLC35A3Q9Y2D2 325 aa10.64□□□□□ -0.71
PTPN2-201ENST00000309660 A0A0B4J2E0 115 aa10.64□□□□□ -0.71
PTPN2-201ENST00000309660 A0A1B0GX12 115 aa10.64□□□□□ -0.71
PTPN2-201ENST00000309660 BLOC1S5-TXNDC5H3BN57 136 aa10.64□□□□□ -0.71
PTPN2-201ENST00000309660 CHP2O43745 196 aa10.64□□□□□ -0.71
PTPN2-201ENST00000309660 PAHP00439 452 aa10.64□□□□□ -0.71
PTPN2-201ENST00000309660 MT-ND5P03915 603 aa10.64□□□□□ -0.71
PTPN2-201ENST00000309660 RPS4Y1P22090 263 aaKnown RBP10.64□□□□□ -0.71
PTPN2-201ENST00000309660 FGF9P31371 208 aaPredicted RBP10.64□□□□□ -0.71
PTPN2-201ENST00000309660 PPP3R1P63098 170 aa10.64□□□□□ -0.71
PTPN2-201ENST00000309660 LCN1P1Q5VSP4 162 aa10.64□□□□□ -0.71
PTPN2-201ENST00000309660 VASNQ6EMK4 673 aa10.64□□□□□ -0.71
PTPN2-201ENST00000309660 SLC7A5P1Q8MH63 180 aa10.64□□□□□ -0.71
PTPN2-201ENST00000309660 C16orf52Q8NHV5 167 aa10.64□□□□□ -0.71
PTPN2-201ENST00000309660 CTHRC1Q96CG8 243 aa10.64□□□□□ -0.71
PTPN2-201ENST00000309660 GAL3ST4Q96RP7 486 aa10.64□□□□□ -0.71
PTPN2-201ENST00000309660 ATF6BQ99941 703 aa10.64□□□□□ -0.71
PTPN2-201ENST00000309660 ZNF649Q9BS31 505 aa10.64□□□□□ -0.71
PTPN2-201ENST00000309660 PPIL3Q9H2H8 161 aaKnown RBP10.64□□□□□ -0.71
PTPN2-201ENST00000309660 KCNN2Q9H2S1 579 aa10.64□□□□□ -0.71
PTPN2-201ENST00000309660 NUFIP1Q9UHK0 495 aaKnown RBP10.64□□□□□ -0.71
PTPN2-201ENST00000309660 PCDHGB2Q9Y5G2 931 aa10.64□□□□□ -0.71
PTPN2-201ENST00000309660 UNC13CQ8NB66 2214 aa10.64□□□□□ -0.71
PTPN2-201ENST00000309660 A0A1B0GVT2 93 aa10.64□□□□□ -0.71
PTPN2-201ENST00000309660 RGS9O75916 674 aaPredicted RBP10.64□□□□□ -0.71
PTPN2-201ENST00000309660 PROS1P07225 676 aa10.64□□□□□ -0.71
PTPN2-201ENST00000309660 SBK2P0C263 348 aa10.64□□□□□ -0.71
PTPN2-201ENST00000309660 IL9P15248 144 aa10.64□□□□□ -0.71
PTPN2-201ENST00000309660 HK1P19367 917 aa10.64□□□□□ -0.71
PTPN2-201ENST00000309660 CD83Q01151 205 aa10.64□□□□□ -0.71
PTPN2-201ENST00000309660 SF3B4Q15427 424 aaKnown RBP eCLIP10.64□□□□□ -0.71
PTPN2-201ENST00000309660 PRAMEF17Q5VTA0 474 aa10.64□□□□□ -0.71
PTPN2-201ENST00000309660 PLET1Q6UQ28 207 aa10.64□□□□□ -0.71
PTPN2-201ENST00000309660 LYPD4Q6UWN0 246 aa10.64□□□□□ -0.71
PTPN2-201ENST00000309660 RTL4Q6ZR62 310 aa10.64□□□□□ -0.71
PTPN2-201ENST00000309660 SSX6Q7RTT6 188 aa10.64□□□□□ -0.71
PTPN2-201ENST00000309660 PRR22Q8IZ63 422 aa10.64□□□□□ -0.71
PTPN2-201ENST00000309660 SAMD12Q8N8I0 201 aa10.64□□□□□ -0.71
PTPN2-201ENST00000309660 OR8D2Q9GZM6 311 aa10.64□□□□□ -0.71
PTPN2-201ENST00000309660 RNF32Q9H0A6 362 aa10.64□□□□□ -0.71
PTPN2-201ENST00000309660 DNAJB12Q9NXW2 375 aaKnown RBP10.64□□□□□ -0.71
PTPN2-201ENST00000309660 NLKQ9UBE8 527 aa10.64□□□□□ -0.71
PTPN2-201ENST00000309660 BOLA1Q9Y3E2 137 aa10.64□□□□□ -0.71
PTPN2-201ENST00000309660 FAM240BA0A1B0GVZ2 78 aa10.63□□□□□ -0.71
PTPN2-201ENST00000309660 CDC14CA4D256 554 aa10.63□□□□□ -0.71
PTPN2-201ENST00000309660 TMEM221A6NGB7 291 aa10.63□□□□□ -0.71
PTPN2-201ENST00000309660 IFNGP01579 166 aa10.63□□□□□ -0.71
PTPN2-201ENST00000309660 HIST1H1CP16403 213 aaKnown RBP10.63□□□□□ -0.71
PTPN2-201ENST00000309660 SLC6A6P31641 620 aa10.63□□□□□ -0.71
PTPN2-201ENST00000309660 OR1D4P47884 311 aa10.63□□□□□ -0.71
PTPN2-201ENST00000309660 MZT2AQ6P582 158 aa10.63□□□□□ -0.71
PTPN2-201ENST00000309660 ZCCHC12Q6PEW1 402 aa10.63□□□□□ -0.71
PTPN2-201ENST00000309660 ZNF613Q6PF04 617 aa10.63□□□□□ -0.71
PTPN2-201ENST00000309660 NPSR1Q6W5P4 371 aa10.63□□□□□ -0.71
PTPN2-201ENST00000309660 TMPRSS11FQ6ZWK6 438 aa10.63□□□□□ -0.71
PTPN2-201ENST00000309660 UBQLNLQ8IYU4 475 aa10.63□□□□□ -0.71
PTPN2-201ENST00000309660 ARIH2OSQ8N7S6 290 aa10.63□□□□□ -0.71
PTPN2-201ENST00000309660 GDPD1Q8N9F7 314 aa10.63□□□□□ -0.71
PTPN2-201ENST00000309660 OR5J2Q8NH18 312 aa10.63□□□□□ -0.71
PTPN2-201ENST00000309660 SETD6Q8TBK2 473 aa10.63□□□□□ -0.71
PTPN2-201ENST00000309660 DNAJA4Q8WW22 397 aaPredicted RBP10.63□□□□□ -0.71
PTPN2-201ENST00000309660 SENP5Q96HI0 755 aaPredicted RBP10.63□□□□□ -0.71
PTPN2-201ENST00000309660 NECTIN4Q96NY8 510 aa10.63□□□□□ -0.71
PTPN2-201ENST00000309660 TTYH2Q9BSA4 534 aa10.63□□□□□ -0.71
PTPN2-201ENST00000309660 TRIM2Q9C040 744 aa10.63□□□□□ -0.71
PTPN2-201ENST00000309660 ZNF576Q9H609 170 aa10.63□□□□□ -0.71
PTPN2-201ENST00000309660 MKKSQ9NPJ1 570 aaPredicted RBP10.63□□□□□ -0.71
PTPN2-201ENST00000309660 C14orf105Q9NVL8 296 aa10.63□□□□□ -0.71
PTPN2-201ENST00000309660 CNTRLQ7Z7A1 2325 aa10.63□□□□□ -0.71
PTPN2-201ENST00000309660 A0A1W2PPC4 97 aa10.63□□□□□ -0.71
PTPN2-201ENST00000309660 MCIDASD6RGH6 385 aa10.63□□□□□ -0.71
PTPN2-201ENST00000309660 H3BSH0 61 aa10.63□□□□□ -0.71
PTPN2-201ENST00000309660 FOXS1O43638 330 aa10.63□□□□□ -0.71
PTPN2-201ENST00000309660 SOX30O94993 753 aa10.63□□□□□ -0.71
PTPN2-201ENST00000309660 LYPD3O95274 346 aa10.63□□□□□ -0.71
PTPN2-201ENST00000309660 ACAA2P42765 397 aaKnown RBP10.63□□□□□ -0.71
PTPN2-201ENST00000309660 GPR50Q13585 617 aa10.63□□□□□ -0.71
PTPN2-201ENST00000309660 QPRTQ15274 297 aa10.63□□□□□ -0.71
PTPN2-201ENST00000309660 ATAD3CQ5T2N8 411 aa10.63□□□□□ -0.71
PTPN2-201ENST00000309660 TTLL10Q6ZVT0 673 aa10.63□□□□□ -0.71
PTPN2-201ENST00000309660 PHOSPHO1Q8TCT1 267 aa10.63□□□□□ -0.71
PTPN2-201ENST00000309660 SNX33Q8WV41 574 aa10.63□□□□□ -0.71
PTPN2-201ENST00000309660 KISS1RQ969F8 398 aaPredicted RBP10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms