RNA–Protein interactions for RNA: ENST00000309546.7

LIME1-201, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LIME1, Length 1,178 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-201ENST00000309546 ADAP00813 363 aa17.34■□□□□ 0.37
LIME1-201ENST00000309546 GSNP06396 782 aa17.34■□□□□ 0.37
LIME1-201ENST00000309546 PGRP06401 933 aa17.34■□□□□ 0.37
LIME1-201ENST00000309546 FESP07332 822 aa17.34■□□□□ 0.37
LIME1-201ENST00000309546 ADSLP30566 484 aaPredicted RBP17.34■□□□□ 0.37
LIME1-201ENST00000309546 DIO1P49895 249 aa17.34■□□□□ 0.37
LIME1-201ENST00000309546 MAGOHP61326 146 aaKnown RBP17.34■□□□□ 0.37
LIME1-201ENST00000309546 SFRP5Q5T4F7 317 aa17.34■□□□□ 0.37
LIME1-201ENST00000309546 ATG16L1Q676U5 607 aa17.34■□□□□ 0.37
LIME1-201ENST00000309546 DNAJC14Q6Y2X3 702 aaPredicted RBP17.34■□□□□ 0.37
LIME1-201ENST00000309546 ZC3HAV1Q7Z2W4 902 aaKnown RBP17.34■□□□□ 0.37
LIME1-201ENST00000309546 LRRC75A-AS1Q8N1F1 130 aa17.34■□□□□ 0.37
LIME1-201ENST00000309546 ANKFN1Q8N957 763 aa17.34■□□□□ 0.37
LIME1-201ENST00000309546 FAM71CQ8NEG0 241 aa17.34■□□□□ 0.37
LIME1-201ENST00000309546 PNPT1Q8TCS8 783 aaKnown RBP17.34■□□□□ 0.37
LIME1-201ENST00000309546 SLC25A43Q8WUT9 341 aaPredicted RBP17.34■□□□□ 0.37
LIME1-201ENST00000309546 OIT3Q8WWZ8 545 aa17.34■□□□□ 0.37
LIME1-201ENST00000309546 KISS1RQ969F8 398 aaPredicted RBP17.34■□□□□ 0.37
LIME1-201ENST00000309546 ZNF775Q96BV0 537 aaPredicted RBP17.34■□□□□ 0.37
LIME1-201ENST00000309546 ZG16BQ96DA0 208 aa17.34■□□□□ 0.37
LIME1-201ENST00000309546 SMR3AQ99954 134 aa17.34■□□□□ 0.37
LIME1-201ENST00000309546 SAP130Q9H0E3 1048 aa17.34■□□□□ 0.37
LIME1-201ENST00000309546 BCO1Q9HAY6 547 aa17.34■□□□□ 0.37
LIME1-201ENST00000309546 CTPS2Q9NRF8 586 aa17.34■□□□□ 0.37
LIME1-201ENST00000309546 ST6GALNAC1Q9NSC7 600 aaPredicted RBP17.34■□□□□ 0.37
LIME1-201ENST00000309546 NKIRAS1Q9NYS0 192 aa17.34■□□□□ 0.37
LIME1-201ENST00000309546 GPR45Q9Y5Y3 372 aa17.34■□□□□ 0.37
LIME1-201ENST00000309546 SPIN1Q9Y657 262 aaPredicted RBP17.34■□□□□ 0.37
LIME1-201ENST00000309546 CYTIPO60759 359 aa17.33■□□□□ 0.36
LIME1-201ENST00000309546 GUSBP08236 651 aa17.33■□□□□ 0.36
LIME1-201ENST00000309546 ANXA11P50995 505 aaKnown RBP17.33■□□□□ 0.36
LIME1-201ENST00000309546 CSNK2A1P68400 391 aaPredicted RBP17.33■□□□□ 0.36
LIME1-201ENST00000309546 KCNJ10P78508 379 aa17.33■□□□□ 0.36
LIME1-201ENST00000309546 CAPRIN1Q14444 709 aaKnown RBP17.33■□□□□ 0.36
LIME1-201ENST00000309546 SYPL1Q16563 259 aa17.33■□□□□ 0.36
LIME1-201ENST00000309546 Q71RC1 249 aaPredicted RBP17.33■□□□□ 0.36
LIME1-201ENST00000309546 ARFGAP2Q8N6H7 521 aa17.33■□□□□ 0.36
LIME1-201ENST00000309546 POM121Q96HA1 1249 aa17.33■□□□□ 0.36
LIME1-201ENST00000309546 HDHD5Q9BXW7 423 aa17.33■□□□□ 0.36
LIME1-201ENST00000309546 PRSS50Q9UI38 385 aa17.33■□□□□ 0.36
LIME1-201ENST00000309546 ING1Q9UK53 422 aaPredicted RBP17.33■□□□□ 0.36
LIME1-201ENST00000309546 ZNF814B7Z6K7 855 aa17.32■□□□□ 0.36
LIME1-201ENST00000309546 CHRM4P08173 479 aa17.32■□□□□ 0.36
LIME1-201ENST00000309546 INHBBP09529 407 aa17.32■□□□□ 0.36
LIME1-201ENST00000309546 CCNA2P20248 432 aa17.32■□□□□ 0.36
LIME1-201ENST00000309546 APOBEC1P41238 236 aaKnown RBP17.32■□□□□ 0.36
LIME1-201ENST00000309546 OR3A2P47893 321 aa17.32■□□□□ 0.36
LIME1-201ENST00000309546 TMPPEQ6ZT21 453 aa17.32■□□□□ 0.36
LIME1-201ENST00000309546 GRINAQ7Z429 371 aa17.32■□□□□ 0.36
LIME1-201ENST00000309546 YTHDF3Q7Z739 585 aaKnown RBP17.32■□□□□ 0.36
LIME1-201ENST00000309546 BIVMQ86UB2 503 aa17.32■□□□□ 0.36
LIME1-201ENST00000309546 Q96MF0 132 aa17.32■□□□□ 0.36
LIME1-201ENST00000309546 CCDC106Q9BWC9 280 aa17.32■□□□□ 0.36
LIME1-201ENST00000309546 CHRNA9Q9UGM1 479 aa17.32■□□□□ 0.36
LIME1-201ENST00000309546 ROS1P08922 2347 aa17.32■□□□□ 0.36
LIME1-201ENST00000309546 RFXANKO14593 260 aa17.31■□□□□ 0.36
LIME1-201ENST00000309546 CLOCKO15516 846 aa17.31■□□□□ 0.36
LIME1-201ENST00000309546 ERLIN1O75477 346 aa17.31■□□□□ 0.36
LIME1-201ENST00000309546 LYZL6O75951 148 aa17.31■□□□□ 0.36
LIME1-201ENST00000309546 NR2F1P10589 423 aa17.31■□□□□ 0.36
LIME1-201ENST00000309546 IDO1P14902 403 aa17.31■□□□□ 0.36
LIME1-201ENST00000309546 EDNRAP25101 427 aa17.31■□□□□ 0.36
LIME1-201ENST00000309546 IDH2P48735 452 aaKnown RBP17.31■□□□□ 0.36
LIME1-201ENST00000309546 PLAURQ03405 335 aa17.31■□□□□ 0.36
LIME1-201ENST00000309546 LRRC74AQ0VAA2 488 aa17.31■□□□□ 0.36
LIME1-201ENST00000309546 ITGADQ13349 1161 aa17.31■□□□□ 0.36
LIME1-201ENST00000309546 P2RY6Q15077 328 aa17.31■□□□□ 0.36
LIME1-201ENST00000309546 TAB1Q15750 504 aa17.31■□□□□ 0.36
LIME1-201ENST00000309546 COX20Q5RI15 118 aa17.31■□□□□ 0.36
LIME1-201ENST00000309546 BHLHA15Q7RTS1 189 aaPredicted RBP17.31■□□□□ 0.36
LIME1-201ENST00000309546 LSRQ86X29 649 aaPredicted RBP17.31■□□□□ 0.36
LIME1-201ENST00000309546 ZNF100Q8IYN0 542 aa17.31■□□□□ 0.36
LIME1-201ENST00000309546 RAB3IL1Q8TBN0 382 aa17.31■□□□□ 0.36
LIME1-201ENST00000309546 TMEM171Q8WVE6 324 aa17.31■□□□□ 0.36
LIME1-201ENST00000309546 WDR60Q8WVS4 1066 aa17.31■□□□□ 0.36
LIME1-201ENST00000309546 CNOT9Q92600 299 aaKnown RBP17.31■□□□□ 0.36
LIME1-201ENST00000309546 AKAP1Q92667 903 aaKnown RBP eCLIP17.31■□□□□ 0.36
LIME1-201ENST00000309546 ZHX1-C8orf76Q96EF9 292 aa17.31■□□□□ 0.36
LIME1-201ENST00000309546 TRNT1Q96Q11 434 aaKnown RBP17.31■□□□□ 0.36
LIME1-201ENST00000309546 POTEKPQ9BYX7 375 aa17.31■□□□□ 0.36
LIME1-201ENST00000309546 OR11A1Q9GZK7 315 aa17.31■□□□□ 0.36
LIME1-201ENST00000309546 SLC38A1Q9H2H9 487 aa17.31■□□□□ 0.36
LIME1-201ENST00000309546 MANSC1Q9H8J5 431 aa17.31■□□□□ 0.36
LIME1-201ENST00000309546 EXOSC3Q9NQT5 275 aaKnown RBP17.31■□□□□ 0.36
LIME1-201ENST00000309546 LIPT1Q9Y234 373 aa17.31■□□□□ 0.36
LIME1-201ENST00000309546 SLCO1B7G3V0H7 640 aa17.3■□□□□ 0.36
LIME1-201ENST00000309546 AP3D1O14617 1153 aa17.3■□□□□ 0.36
LIME1-201ENST00000309546 HS3ST1O14792 307 aa17.3■□□□□ 0.36
LIME1-201ENST00000309546 ADAM11O75078 769 aa17.3■□□□□ 0.36
LIME1-201ENST00000309546 KRT75O95678 551 aa17.3■□□□□ 0.36
LIME1-201ENST00000309546 PTH2RP49190 550 aa17.3■□□□□ 0.36
LIME1-201ENST00000309546 STK11Q15831 433 aa17.3■□□□□ 0.36
LIME1-201ENST00000309546 SLC9B1Q4ZJI4 515 aa17.3■□□□□ 0.36
LIME1-201ENST00000309546 PDCD4Q53EL6 469 aaKnown RBP17.3■□□□□ 0.36
LIME1-201ENST00000309546 ABLIM2Q6H8Q1 611 aa17.3■□□□□ 0.36
LIME1-201ENST00000309546 Q6ZT83 130 aa17.3■□□□□ 0.36
LIME1-201ENST00000309546 GALNT5Q7Z7M9 940 aa17.3■□□□□ 0.36
LIME1-201ENST00000309546 GLB1L3Q8NCI6 653 aaPredicted RBP17.3■□□□□ 0.36
LIME1-201ENST00000309546 ARL5BQ96KC2 179 aa17.3■□□□□ 0.36
LIME1-201ENST00000309546 TMEM204Q9BSN7 226 aa17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms