RNA–Protein interactions for RNA: ENST00000308077.9

PTCD2-201, Transcript of pentatricopeptide repeat domain 2, humanhuman

TSL 1 (best)

Gene PTCD2, Length 2,195 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2-201ENST00000308077 M0R129 80 aa6.35□□□□□ -1.39
PTCD2-201ENST00000308077 KPNA4O00629 521 aaPredicted RBP6.35□□□□□ -1.39
PTCD2-201ENST00000308077 GNB5O14775 395 aa6.35□□□□□ -1.39
PTCD2-201ENST00000308077 HCRTR2O43614 444 aa6.35□□□□□ -1.39
PTCD2-201ENST00000308077 EIF4E2O60573 245 aaKnown RBP6.35□□□□□ -1.39
PTCD2-201ENST00000308077 OR6B1O95007 311 aa6.35□□□□□ -1.39
PTCD2-201ENST00000308077 TNFAIP8O95379 198 aa6.35□□□□□ -1.39
PTCD2-201ENST00000308077 MAKP20794 623 aa6.35□□□□□ -1.39
PTCD2-201ENST00000308077 IDH2P48735 452 aaKnown RBP6.35□□□□□ -1.39
PTCD2-201ENST00000308077 TPD52P55327 224 aaPredicted RBP6.35□□□□□ -1.39
PTCD2-201ENST00000308077 MLF1P58340 268 aa6.35□□□□□ -1.39
PTCD2-201ENST00000308077 ESRRGP62508 458 aa6.35□□□□□ -1.39
PTCD2-201ENST00000308077 TSPAN31Q12999 210 aa6.35□□□□□ -1.39
PTCD2-201ENST00000308077 CHAF1BQ13112 559 aa6.35□□□□□ -1.39
PTCD2-201ENST00000308077 TGIF1Q15583 401 aa6.35□□□□□ -1.39
PTCD2-201ENST00000308077 ZNF791Q3KP31 576 aaPredicted RBP6.35□□□□□ -1.39
PTCD2-201ENST00000308077 ULK3Q6PHR2 472 aa6.35□□□□□ -1.39
PTCD2-201ENST00000308077 TTC33Q6PID6 262 aaPredicted RBP6.35□□□□□ -1.39
PTCD2-201ENST00000308077 NUP54Q7Z3B4 507 aa6.35□□□□□ -1.39
PTCD2-201ENST00000308077 P3H2Q8IVL5 708 aa6.35□□□□□ -1.39
PTCD2-201ENST00000308077 ENTHD1Q8IYW4 607 aa6.35□□□□□ -1.39
PTCD2-201ENST00000308077 ARMC10Q8N2F6 343 aa6.35□□□□□ -1.39
PTCD2-201ENST00000308077 SLC15A4Q8N697 577 aa6.35□□□□□ -1.39
PTCD2-201ENST00000308077 CNIH3Q8TBE1 160 aa6.35□□□□□ -1.39
PTCD2-201ENST00000308077 TTC9Q92623 222 aa6.35□□□□□ -1.39
PTCD2-201ENST00000308077 TMCO6Q96DC7 493 aa6.35□□□□□ -1.39
PTCD2-201ENST00000308077 SPACA9Q96E40 222 aaPredicted RBP6.35□□□□□ -1.39
PTCD2-201ENST00000308077 CDCP1Q9H5V8 836 aa6.35□□□□□ -1.39
PTCD2-201ENST00000308077 RPS6KB2Q9UBS0 482 aa6.35□□□□□ -1.39
PTCD2-201ENST00000308077 DOPEY2Q9Y3R5 2298 aa6.35□□□□□ -1.39
PTCD2-201ENST00000308077 DOCK10Q96BY6 2186 aa6.34□□□□□ -1.39
PTCD2-201ENST00000308077 A0A087WUJ7 227 aa6.34□□□□□ -1.39
PTCD2-201ENST00000308077 VGLL3A8MV65 326 aa6.34□□□□□ -1.39
PTCD2-201ENST00000308077 FUT1P19526 365 aa6.34□□□□□ -1.39
PTCD2-201ENST00000308077 FPR3P25089 353 aa6.34□□□□□ -1.39
PTCD2-201ENST00000308077 CD82P27701 267 aa6.34□□□□□ -1.39
PTCD2-201ENST00000308077 POU1F1P28069 291 aa6.34□□□□□ -1.39
PTCD2-201ENST00000308077 RBMS1P29558 406 aaKnown RBP6.34□□□□□ -1.39
PTCD2-201ENST00000308077 TMED10P49755 219 aaKnown RBP6.34□□□□□ -1.39
PTCD2-201ENST00000308077 P2RX1P51575 399 aa6.34□□□□□ -1.39
PTCD2-201ENST00000308077 CDH15P55291 814 aa6.34□□□□□ -1.39
PTCD2-201ENST00000308077 IL5RAQ01344 420 aa6.34□□□□□ -1.39
PTCD2-201ENST00000308077 ALDH6A1Q02252 535 aaKnown RBP6.34□□□□□ -1.39
PTCD2-201ENST00000308077 PRKCDQ05655 676 aa6.34□□□□□ -1.39
PTCD2-201ENST00000308077 COX10Q12887 443 aa6.34□□□□□ -1.39
PTCD2-201ENST00000308077 CDK5R2Q13319 367 aa6.34□□□□□ -1.39
PTCD2-201ENST00000308077 MAD2L1BPQ15013 274 aaPredicted RBP6.34□□□□□ -1.39
PTCD2-201ENST00000308077 WBP2NLQ6ICG8 309 aa6.34□□□□□ -1.39
PTCD2-201ENST00000308077 OR5M10Q6IEU7 315 aa6.34□□□□□ -1.39
PTCD2-201ENST00000308077 IGF2-ASQ6U949 168 aa6.34□□□□□ -1.39
PTCD2-201ENST00000308077 RRM2BQ7LG56 351 aa6.34□□□□□ -1.39
PTCD2-201ENST00000308077 ATG4DQ86TL0 474 aaPredicted RBP6.34□□□□□ -1.39
PTCD2-201ENST00000308077 RNF113BQ8IZP6 322 aaKnown RBP6.34□□□□□ -1.39
PTCD2-201ENST00000308077 GALNT15Q8N3T1 639 aa6.34□□□□□ -1.39
PTCD2-201ENST00000308077 IQCF1Q8N6M8 205 aa6.34□□□□□ -1.39
PTCD2-201ENST00000308077 OR8D4Q8NGM9 314 aa6.34□□□□□ -1.39
PTCD2-201ENST00000308077 OR5W2Q8NH69 310 aa6.34□□□□□ -1.39
PTCD2-201ENST00000308077 FAM81AQ8TBF8 368 aa6.34□□□□□ -1.39
PTCD2-201ENST00000308077 DUSP19Q8WTR2 217 aa6.34□□□□□ -1.39
PTCD2-201ENST00000308077 APH1BQ8WW43 257 aa6.34□□□□□ -1.39
PTCD2-201ENST00000308077 NACC2Q96BF6 587 aa6.34□□□□□ -1.39
PTCD2-201ENST00000308077 MPP4Q96JB8 637 aa6.34□□□□□ -1.39
PTCD2-201ENST00000308077 DPH1Q9BZG8 443 aa6.34□□□□□ -1.39
PTCD2-201ENST00000308077 ING2Q9H160 280 aa6.34□□□□□ -1.39
PTCD2-201ENST00000308077 EGLN3Q9H6Z9 239 aa6.34□□□□□ -1.39
PTCD2-201ENST00000308077 ENOPH1Q9UHY7 261 aa6.34□□□□□ -1.39
PTCD2-201ENST00000308077 SCOCQ9UIL1 159 aa6.34□□□□□ -1.39
PTCD2-201ENST00000308077 RNF6Q9Y252 685 aa6.34□□□□□ -1.39
PTCD2-201ENST00000308077 MYRFQ9Y2G1 1151 aa6.34□□□□□ -1.39
PTCD2-201ENST00000308077 CHCHD2Q9Y6H1 151 aaPredicted RBP6.34□□□□□ -1.39
PTCD2-201ENST00000308077 AHCTF1Q8WYP5 2266 aa6.34□□□□□ -1.39
PTCD2-201ENST00000308077 MPDZO75970 2070 aa6.34□□□□□ -1.39
PTCD2-201ENST00000308077 IGKV1D-42A0A075B6H8 117 aa6.34□□□□□ -1.4
PTCD2-201ENST00000308077 TRIM64A6NGJ6 449 aa6.34□□□□□ -1.4
PTCD2-201ENST00000308077 H3BN98 237 aa6.34□□□□□ -1.4
PTCD2-201ENST00000308077 WBP4O75554 376 aaKnown RBP6.34□□□□□ -1.4
PTCD2-201ENST00000308077 IFI30P13284 250 aa6.34□□□□□ -1.4
PTCD2-201ENST00000308077 GABRB1P18505 474 aa6.34□□□□□ -1.4
PTCD2-201ENST00000308077 GSTM3P21266 225 aa6.34□□□□□ -1.4
PTCD2-201ENST00000308077 IFNGR2P38484 337 aa6.34□□□□□ -1.4
PTCD2-201ENST00000308077 RBM34P42696 430 aaKnown RBP6.34□□□□□ -1.4
PTCD2-201ENST00000308077 SLC6A8P48029 635 aa6.34□□□□□ -1.4
PTCD2-201ENST00000308077 CTBP2P56545 445 aa6.34□□□□□ -1.4
PTCD2-201ENST00000308077 NUP107P57740 925 aa6.34□□□□□ -1.4
PTCD2-201ENST00000308077 FXYD6P3P58550 94 aa6.34□□□□□ -1.4
PTCD2-201ENST00000308077 COPZ1P61923 177 aa6.34□□□□□ -1.4
PTCD2-201ENST00000308077 SRSF6Q13247 344 aaKnown RBP6.34□□□□□ -1.4
PTCD2-201ENST00000308077 APOFQ13790 326 aa6.34□□□□□ -1.4
PTCD2-201ENST00000308077 C6orf141Q5SZD1 244 aa6.34□□□□□ -1.4
PTCD2-201ENST00000308077 ZNF468Q5VIY5 522 aaPredicted RBP6.34□□□□□ -1.4
PTCD2-201ENST00000308077 SLX4IPQ5VYV7 408 aa6.34□□□□□ -1.4
PTCD2-201ENST00000308077 B3GNTL1Q67FW5 361 aaPredicted RBP6.34□□□□□ -1.4
PTCD2-201ENST00000308077 H3F3CQ6NXT2 135 aa6.34□□□□□ -1.4
PTCD2-201ENST00000308077 IL20RBQ6UXL0 311 aa6.34□□□□□ -1.4
PTCD2-201ENST00000308077 RASSF6Q6ZTQ3 369 aa6.34□□□□□ -1.4
PTCD2-201ENST00000308077 RPS19BP1Q86WX3 136 aaKnown RBP6.34□□□□□ -1.4
PTCD2-201ENST00000308077 RAB43Q86YS6 212 aa6.34□□□□□ -1.4
PTCD2-201ENST00000308077 CCDC103Q8IW40 242 aa6.34□□□□□ -1.4
PTCD2-201ENST00000308077 IL22RA1Q8N6P7 574 aa6.34□□□□□ -1.4
PTCD2-201ENST00000308077 SIRT6Q8N6T7 355 aa6.34□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms