RNA–Protein interactions for RNA: ENST00000306726.6

PTPN9-201, Transcript of protein tyrosine phosphatase, non-receptor type 9, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PTPN9, Length 3,862 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9-201ENST00000306726 RAD52P43351 418 aa13.52□□□□□ -0.25
PTPN9-201ENST00000306726 PTH2RP49190 550 aa13.52□□□□□ -0.25
PTPN9-201ENST00000306726 SELENOPP49908 381 aa13.52□□□□□ -0.25
PTPN9-201ENST00000306726 VASPP50552 380 aaPredicted RBP13.52□□□□□ -0.25
PTPN9-201ENST00000306726 ERVK-25P63136 954 aa13.52□□□□□ -0.25
PTPN9-201ENST00000306726 EEF1A2Q05639 463 aaKnown RBP13.52□□□□□ -0.25
PTPN9-201ENST00000306726 ST3GAL2Q16842 350 aa13.52□□□□□ -0.25
PTPN9-201ENST00000306726 NKPD1Q17RQ9 610 aa13.52□□□□□ -0.25
PTPN9-201ENST00000306726 C3orf38Q5JPI3 329 aa13.52□□□□□ -0.25
PTPN9-201ENST00000306726 MRPL2Q5T653 305 aaKnown RBP13.52□□□□□ -0.25
PTPN9-201ENST00000306726 TMEM91Q6ZNR0 172 aa13.52□□□□□ -0.25
PTPN9-201ENST00000306726 TMPRSS9Q7Z410 1059 aa13.52□□□□□ -0.25
PTPN9-201ENST00000306726 CCL4L1Q8NHW4 92 aa13.52□□□□□ -0.25
PTPN9-201ENST00000306726 SLC25A36Q96CQ1 311 aa13.52□□□□□ -0.25
PTPN9-201ENST00000306726 GVINP1Q7Z2Y8 2422 aa13.51□□□□□ -0.25
PTPN9-201ENST00000306726 IGLV3-16A0A075B6K0 115 aa13.51□□□□□ -0.25
PTPN9-201ENST00000306726 NAT1P18440 290 aa13.51□□□□□ -0.25
PTPN9-201ENST00000306726 HIST1H1TP22492 207 aaPredicted RBP13.51□□□□□ -0.25
PTPN9-201ENST00000306726 GALEQ14376 348 aa13.51□□□□□ -0.25
PTPN9-201ENST00000306726 ZNF628Q5EBL2 1059 aa13.51□□□□□ -0.25
PTPN9-201ENST00000306726 ZNF627Q7L945 461 aa13.51□□□□□ -0.25
PTPN9-201ENST00000306726 RNF170Q96K19 258 aa13.51□□□□□ -0.25
PTPN9-201ENST00000306726 MAN2C1Q9NTJ4 1040 aa13.51□□□□□ -0.25
PTPN9-201ENST00000306726 STON1Q9Y6Q2 735 aa13.51□□□□□ -0.25
PTPN9-201ENST00000306726 A8MVJ9 347 aa13.51□□□□□ -0.25
PTPN9-201ENST00000306726 RPN2P04844 631 aa13.51□□□□□ -0.25
PTPN9-201ENST00000306726 ITPKBP27987 946 aa13.51□□□□□ -0.25
PTPN9-201ENST00000306726 CSNK1G2P78368 415 aa13.51□□□□□ -0.25
PTPN9-201ENST00000306726 SHC2P98077 582 aa13.51□□□□□ -0.25
PTPN9-201ENST00000306726 C1orf61Q13536 156 aa13.51□□□□□ -0.25
PTPN9-201ENST00000306726 LINC01555Q8NAE3 123 aa13.51□□□□□ -0.25
PTPN9-201ENST00000306726 CASTOR1Q8WTX7 329 aa13.51□□□□□ -0.25
PTPN9-201ENST00000306726 SLC35A4Q96G79 324 aa13.51□□□□□ -0.25
PTPN9-201ENST00000306726 SEC22AQ96IW7 307 aa13.51□□□□□ -0.25
PTPN9-201ENST00000306726 MYADMQ96S97 322 aa13.51□□□□□ -0.25
PTPN9-201ENST00000306726 NMNAT3Q96T66 252 aa13.51□□□□□ -0.25
PTPN9-201ENST00000306726 ELF4Q99607 663 aaPredicted RBP13.51□□□□□ -0.25
PTPN9-201ENST00000306726 C2orf16Q68DN1 1984 aa13.51□□□□□ -0.25
PTPN9-201ENST00000306726 ASXL3Q9C0F0 2248 aa13.51□□□□□ -0.25
PTPN9-201ENST00000306726 NOTCH4Q99466 2003 aa13.51□□□□□ -0.25
PTPN9-201ENST00000306726 PLXND1Q9Y4D7 1925 aa13.51□□□□□ -0.25
PTPN9-201ENST00000306726 KIF26AQ9ULI4 1882 aaPredicted RBP13.51□□□□□ -0.25
PTPN9-201ENST00000306726 LGI1O95970 557 aa13.51□□□□□ -0.25
PTPN9-201ENST00000306726 GLULP15104 373 aa13.51□□□□□ -0.25
PTPN9-201ENST00000306726 TSPAN31Q12999 210 aa13.51□□□□□ -0.25
PTPN9-201ENST00000306726 TCTE1Q5JU00 501 aa13.51□□□□□ -0.25
PTPN9-201ENST00000306726 CDKL4Q5MAI5 379 aa13.51□□□□□ -0.25
PTPN9-201ENST00000306726 TMEM64Q6YI46 380 aa13.51□□□□□ -0.25
PTPN9-201ENST00000306726 ZNF782Q6ZMW2 699 aaPredicted RBP13.51□□□□□ -0.25
PTPN9-201ENST00000306726 BPIFA2Q96DR5 249 aa13.51□□□□□ -0.25
PTPN9-201ENST00000306726 GUCD1Q96NT3 240 aa13.51□□□□□ -0.25
PTPN9-201ENST00000306726 CPEB1Q9BZB8 566 aaKnown RBP13.51□□□□□ -0.25
PTPN9-201ENST00000306726 TMEM27Q9HBJ8 222 aa13.51□□□□□ -0.25
PTPN9-201ENST00000306726 SIDT1Q9NXL6 827 aaKnown RBP13.51□□□□□ -0.25
PTPN9-201ENST00000306726 NDOR1Q9UHB4 597 aa13.51□□□□□ -0.25
PTPN9-201ENST00000306726 BAIAP2Q9UQB8 552 aa13.51□□□□□ -0.25
PTPN9-201ENST00000306726 MAB21L2Q9Y586 359 aa13.51□□□□□ -0.25
PTPN9-201ENST00000306726 GPANK1O95872 356 aa13.5□□□□□ -0.25
PTPN9-201ENST00000306726 F13BP05160 661 aa13.5□□□□□ -0.25
PTPN9-201ENST00000306726 ANKRD34CP0C6C1 535 aa13.5□□□□□ -0.25
PTPN9-201ENST00000306726 OMPP47874 163 aa13.5□□□□□ -0.25
PTPN9-201ENST00000306726 GDI2P50395 445 aaKnown RBP13.5□□□□□ -0.25
PTPN9-201ENST00000306726 ZNF234Q14588 700 aa13.5□□□□□ -0.25
PTPN9-201ENST00000306726 DUSP5Q16690 384 aa13.5□□□□□ -0.25
PTPN9-201ENST00000306726 TMEM69Q5SWH9 247 aa13.5□□□□□ -0.25
PTPN9-201ENST00000306726 SLC6A19Q695T7 634 aa13.5□□□□□ -0.25
PTPN9-201ENST00000306726 LAMTOR1Q6IAA8 161 aa13.5□□□□□ -0.25
PTPN9-201ENST00000306726 ZNF767PQ75MW2 155 aa13.5□□□□□ -0.25
PTPN9-201ENST00000306726 SSX6Q7RTT6 188 aa13.5□□□□□ -0.25
PTPN9-201ENST00000306726 RANBP3LQ86VV4 465 aaPredicted RBP13.5□□□□□ -0.25
PTPN9-201ENST00000306726 SFTPA2Q8IWL1 248 aa13.5□□□□□ -0.25
PTPN9-201ENST00000306726 LNX2Q8N448 690 aa13.5□□□□□ -0.25
PTPN9-201ENST00000306726 OR7G2Q8NG99 324 aa13.5□□□□□ -0.25
PTPN9-201ENST00000306726 OR52E1Q8NGJ3 308 aa13.5□□□□□ -0.25
PTPN9-201ENST00000306726 HAVCR2Q8TDQ0 301 aa13.5□□□□□ -0.25
PTPN9-201ENST00000306726 TCF7L1Q9HCS4 588 aa13.5□□□□□ -0.25
PTPN9-201ENST00000306726 ZSCAN32Q9NX65 697 aa13.5□□□□□ -0.25
PTPN9-201ENST00000306726 A0A1W2PRQ8 180 aa13.5□□□□□ -0.25
PTPN9-201ENST00000306726 OTOL1A6NHN0 477 aaPredicted RBP13.5□□□□□ -0.25
PTPN9-201ENST00000306726 FOXE1O00358 373 aaPredicted RBP13.5□□□□□ -0.25
PTPN9-201ENST00000306726 SELENOFO60613 162 aa13.5□□□□□ -0.25
PTPN9-201ENST00000306726 HMGN1P05114 100 aa13.5□□□□□ -0.25
PTPN9-201ENST00000306726 OR8G3PP0DMU2 310 aa13.5□□□□□ -0.25
PTPN9-201ENST00000306726 FCARP24071 287 aa13.5□□□□□ -0.25
PTPN9-201ENST00000306726 DCTDP32321 178 aa13.5□□□□□ -0.25
PTPN9-201ENST00000306726 EIF1AXP47813 144 aaKnown RBP13.5□□□□□ -0.25
PTPN9-201ENST00000306726 CLDN20P56880 219 aa13.5□□□□□ -0.25
PTPN9-201ENST00000306726 MAPK14Q16539 360 aa13.5□□□□□ -0.25
PTPN9-201ENST00000306726 OR5M10Q6IEU7 315 aa13.5□□□□□ -0.25
PTPN9-201ENST00000306726 PRSS41Q7RTY9 318 aa13.5□□□□□ -0.25
PTPN9-201ENST00000306726 OR52I2Q8NH67 350 aa13.5□□□□□ -0.25
PTPN9-201ENST00000306726 SFXN2Q96NB2 322 aa13.5□□□□□ -0.25
PTPN9-201ENST00000306726 C8orf33Q9H7E9 229 aaPredicted RBP13.5□□□□□ -0.25
PTPN9-201ENST00000306726 FOLH1BQ9HBA9 442 aa13.5□□□□□ -0.25
PTPN9-201ENST00000306726 MED31Q9Y3C7 131 aa13.5□□□□□ -0.25
PTPN9-201ENST00000306726 EYSQ5T1H1 3165 aa13.5□□□□□ -0.25
PTPN9-201ENST00000306726 A0A1B0GVI7 797 aa13.5□□□□□ -0.25
PTPN9-201ENST00000306726 TRABD2BA6NFA1 517 aa13.5□□□□□ -0.25
PTPN9-201ENST00000306726 PRPH2P23942 346 aa13.5□□□□□ -0.25
PTPN9-201ENST00000306726 HMGA2P52926 109 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms