RNA–Protein interactions for RNA: ENST00000305364.8

TRIM35-201, Transcript of tripartite motif containing 35, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM35, Length 4,229 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35-201ENST00000305364 TRAPPC13A5PLN9 417 aa12.12□□□□□ -0.47
TRIM35-201ENST00000305364 LRRC72A6NJI9 287 aa12.12□□□□□ -0.47
TRIM35-201ENST00000305364 F8W036 122 aa12.12□□□□□ -0.47
TRIM35-201ENST00000305364 ICAM2P13598 275 aa12.12□□□□□ -0.47
TRIM35-201ENST00000305364 IFNGR1P15260 489 aa12.12□□□□□ -0.47
TRIM35-201ENST00000305364 POU3F2P20265 443 aaPredicted RBP12.12□□□□□ -0.47
TRIM35-201ENST00000305364 BLOC1S1P78537 153 aa12.12□□□□□ -0.47
TRIM35-201ENST00000305364 ZNF805Q5CZA5 627 aa12.12□□□□□ -0.47
TRIM35-201ENST00000305364 C6orf132Q5T0Z8 1188 aa12.12□□□□□ -0.47
TRIM35-201ENST00000305364 MBOAT2Q6ZWT7 520 aa12.12□□□□□ -0.47
TRIM35-201ENST00000305364 SDR9C7Q8NEX9 313 aa12.12□□□□□ -0.47
TRIM35-201ENST00000305364 HGDQ93099 445 aa12.12□□□□□ -0.47
TRIM35-201ENST00000305364 DERL3Q96Q80 235 aa12.12□□□□□ -0.47
TRIM35-201ENST00000305364 HHIPQ96QV1 700 aa12.12□□□□□ -0.47
TRIM35-201ENST00000305364 TEAD3Q99594 435 aa12.12□□□□□ -0.47
TRIM35-201ENST00000305364 EMC3Q9P0I2 261 aa12.12□□□□□ -0.47
TRIM35-201ENST00000305364 DOCK4Q8N1I0 1966 aa12.12□□□□□ -0.47
TRIM35-201ENST00000305364 CBX7O95931 251 aa12.12□□□□□ -0.47
TRIM35-201ENST00000305364 NAGAP17050 411 aa12.12□□□□□ -0.47
TRIM35-201ENST00000305364 ADAM8P78325 824 aa12.12□□□□□ -0.47
TRIM35-201ENST00000305364 ZNF273Q14593 569 aa12.12□□□□□ -0.47
TRIM35-201ENST00000305364 FAM74A1Q5RGS3 127 aa12.12□□□□□ -0.47
TRIM35-201ENST00000305364 AADACL4Q5VUY2 407 aa12.12□□□□□ -0.47
TRIM35-201ENST00000305364 OR4N5Q8IXE1 308 aa12.12□□□□□ -0.47
TRIM35-201ENST00000305364 ANKRD53Q8N9V6 530 aa12.12□□□□□ -0.47
TRIM35-201ENST00000305364 DUSP19Q8WTR2 217 aa12.12□□□□□ -0.47
TRIM35-201ENST00000305364 ANKRD36A6QL64 1941 aa12.12□□□□□ -0.47
TRIM35-201ENST00000305364 ZNF705EA8MWA4 302 aaPredicted RBP12.12□□□□□ -0.47
TRIM35-201ENST00000305364 ACTA2P62736 377 aa12.12□□□□□ -0.47
TRIM35-201ENST00000305364 ACTG2P63267 376 aa12.12□□□□□ -0.47
TRIM35-201ENST00000305364 CD200R1LQ6Q8B3 271 aa12.12□□□□□ -0.47
TRIM35-201ENST00000305364 LCTLQ6UWM7 567 aa12.12□□□□□ -0.47
TRIM35-201ENST00000305364 NHLRC1Q6VVB1 395 aa12.12□□□□□ -0.47
TRIM35-201ENST00000305364 SMIM4Q8WVI0 70 aa12.12□□□□□ -0.47
TRIM35-201ENST00000305364 NKD1Q969G9 470 aa12.12□□□□□ -0.47
TRIM35-201ENST00000305364 ARSGQ96EG1 525 aa12.12□□□□□ -0.47
TRIM35-201ENST00000305364 CNN2Q99439 309 aaKnown RBP12.12□□□□□ -0.47
TRIM35-201ENST00000305364 NDOR1Q9UHB4 597 aa12.12□□□□□ -0.47
TRIM35-201ENST00000305364 ICKQ9UPZ9 632 aa12.12□□□□□ -0.47
TRIM35-201ENST00000305364 NPIPA5A0A0B4J1W7 369 aa12.11□□□□□ -0.47
TRIM35-201ENST00000305364 FAM171A2A8MVW0 826 aa12.11□□□□□ -0.47
TRIM35-201ENST00000305364 NPIPA7E9PJI5 369 aa12.11□□□□□ -0.47
TRIM35-201ENST00000305364 NPIPA8P0DM63 369 aa12.11□□□□□ -0.47
TRIM35-201ENST00000305364 EPXP11678 715 aa12.11□□□□□ -0.47
TRIM35-201ENST00000305364 SKP1P63208 163 aa12.11□□□□□ -0.47
TRIM35-201ENST00000305364 HLXQ14774 488 aaPredicted RBP12.11□□□□□ -0.47
TRIM35-201ENST00000305364 DECR1Q16698 335 aa12.11□□□□□ -0.47
TRIM35-201ENST00000305364 NIPAL3Q6P499 406 aa12.11□□□□□ -0.47
TRIM35-201ENST00000305364 ZCCHC12Q6PEW1 402 aa12.11□□□□□ -0.47
TRIM35-201ENST00000305364 TSSK4Q6SA08 328 aa12.11□□□□□ -0.47
TRIM35-201ENST00000305364 CD300LDQ6UXZ3 194 aa12.11□□□□□ -0.47
TRIM35-201ENST00000305364 C17orf47Q8NEP4 570 aa12.11□□□□□ -0.47
TRIM35-201ENST00000305364 THAP6Q8TBB0 222 aa12.11□□□□□ -0.47
TRIM35-201ENST00000305364 ZG16BQ96DA0 208 aa12.11□□□□□ -0.47
TRIM35-201ENST00000305364 BPIFA2Q96DR5 249 aa12.11□□□□□ -0.47
TRIM35-201ENST00000305364 NKX6-2Q9C056 277 aaPredicted RBP12.11□□□□□ -0.47
TRIM35-201ENST00000305364 NOX4Q9NPH5 578 aa12.11□□□□□ -0.47
TRIM35-201ENST00000305364 PRELID3BQ9Y3B1 194 aa12.11□□□□□ -0.47
TRIM35-201ENST00000305364 V9GY05 133 aa12.11□□□□□ -0.47
TRIM35-201ENST00000305364 A0A1B0GUH1 482 aa12.11□□□□□ -0.47
TRIM35-201ENST00000305364 C5orf51A6NDU8 294 aa12.11□□□□□ -0.47
TRIM35-201ENST00000305364 ELOA3DA6NLF2 546 aaPredicted RBP12.11□□□□□ -0.47
TRIM35-201ENST00000305364 SBK2P0C263 348 aa12.11□□□□□ -0.47
TRIM35-201ENST00000305364 TIMP2P16035 220 aa12.11□□□□□ -0.47
TRIM35-201ENST00000305364 VAMP1P23763 118 aa12.11□□□□□ -0.47
TRIM35-201ENST00000305364 DDX6P26196 483 aaKnown RBP eCLIP12.11□□□□□ -0.47
TRIM35-201ENST00000305364 SMCO1Q147U7 214 aa12.11□□□□□ -0.47
TRIM35-201ENST00000305364 CDKN3Q16667 212 aa12.11□□□□□ -0.47
TRIM35-201ENST00000305364 PRSS53Q2L4Q9 553 aa12.11□□□□□ -0.47
TRIM35-201ENST00000305364 ELOA3BQ3SY89 546 aa12.11□□□□□ -0.47
TRIM35-201ENST00000305364 SLC8B1Q6J4K2 584 aa12.11□□□□□ -0.47
TRIM35-201ENST00000305364 RD3Q7Z3Z2 195 aa12.11□□□□□ -0.47
TRIM35-201ENST00000305364 KLHDC8AQ8IYD2 350 aa12.11□□□□□ -0.47
TRIM35-201ENST00000305364 MORN4Q8NDC4 146 aa12.11□□□□□ -0.47
TRIM35-201ENST00000305364 ELOA3Q8NG57 546 aa12.11□□□□□ -0.47
TRIM35-201ENST00000305364 MOAP1Q96BY2 351 aa12.11□□□□□ -0.47
TRIM35-201ENST00000305364 ADAD1Q96M93 576 aaKnown RBP12.11□□□□□ -0.47
TRIM35-201ENST00000305364 INPP5EQ9NRR6 644 aa12.11□□□□□ -0.47
TRIM35-201ENST00000305364 WSB2Q9NYS7 404 aaPredicted RBP12.11□□□□□ -0.47
TRIM35-201ENST00000305364 SIRT4Q9Y6E7 314 aaPredicted RBP12.11□□□□□ -0.47
TRIM35-201ENST00000305364 RPS10-NUDT3A0A1W2PQS6 291 aa12.11□□□□□ -0.47
TRIM35-201ENST00000305364 PPM1DO15297 605 aa12.11□□□□□ -0.47
TRIM35-201ENST00000305364 SIGLEC5O15389 551 aa12.11□□□□□ -0.47
TRIM35-201ENST00000305364 GLULP15104 373 aa12.11□□□□□ -0.47
TRIM35-201ENST00000305364 UGT2B7P16662 529 aa12.11□□□□□ -0.47
TRIM35-201ENST00000305364 AGTR1P30556 359 aa12.11□□□□□ -0.47
TRIM35-201ENST00000305364 DCTDP32321 178 aa12.11□□□□□ -0.47
TRIM35-201ENST00000305364 FOXK2Q01167 660 aa12.11□□□□□ -0.47
TRIM35-201ENST00000305364 SIGLEC14Q08ET2 396 aa12.11□□□□□ -0.47
TRIM35-201ENST00000305364 LY6G5CQ5SRR4 150 aa12.11□□□□□ -0.47
TRIM35-201ENST00000305364 SLC25A30Q5SVS4 291 aa12.11□□□□□ -0.47
TRIM35-201ENST00000305364 LRRTM4Q86VH4 590 aa12.11□□□□□ -0.47
TRIM35-201ENST00000305364 OR2A12Q8NGT7 310 aa12.11□□□□□ -0.47
TRIM35-201ENST00000305364 CASTOR1Q8WTX7 329 aa12.11□□□□□ -0.47
TRIM35-201ENST00000305364 SEMA4CQ9C0C4 833 aa12.11□□□□□ -0.47
TRIM35-201ENST00000305364 B3GNT4Q9C0J1 378 aa12.11□□□□□ -0.47
TRIM35-201ENST00000305364 TRAV18A0A075B6X5 111 aa12.1□□□□□ -0.47
TRIM35-201ENST00000305364 AIPO00170 330 aa12.1□□□□□ -0.47
TRIM35-201ENST00000305364 KIAA0355O15063 1070 aa12.1□□□□□ -0.47
TRIM35-201ENST00000305364 CCL16O15467 120 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms