RNA–Protein interactions for RNA: ENST00000304060.9

ZNF440-201, Transcript of zinc finger protein 440, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZNF440, Length 4,189 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF440-201ENST00000304060 MED9Q9NWA0 146 aa5.29□□□□□ -1.56
ZNF440-201ENST00000304060 ACANP16112 2415 aa5.29□□□□□ -1.56
ZNF440-201ENST00000304060 TIPRLO75663 272 aa5.29□□□□□ -1.56
ZNF440-201ENST00000304060 SOX30O94993 753 aa5.29□□□□□ -1.56
ZNF440-201ENST00000304060 CD247P20963 164 aa5.29□□□□□ -1.56
ZNF440-201ENST00000304060 ABCE1P61221 599 aaKnown RBP5.29□□□□□ -1.56
ZNF440-201ENST00000304060 COPZ1P61923 177 aa5.29□□□□□ -1.56
ZNF440-201ENST00000304060 RASGEF1BQ0VAM2 473 aa5.29□□□□□ -1.56
ZNF440-201ENST00000304060 GLYR1Q49A26 553 aaPredicted RBP5.29□□□□□ -1.56
ZNF440-201ENST00000304060 SLC22A25Q6T423 547 aa5.29□□□□□ -1.56
ZNF440-201ENST00000304060 ZNF534Q76KX8 674 aa5.29□□□□□ -1.56
ZNF440-201ENST00000304060 RHOUQ7L0Q8 258 aa5.29□□□□□ -1.56
ZNF440-201ENST00000304060 ARMC8Q8IUR7 673 aa5.29□□□□□ -1.56
ZNF440-201ENST00000304060 ANKFN1Q8N957 763 aa5.29□□□□□ -1.56
ZNF440-201ENST00000304060 FNDC5Q8NAU1 212 aa5.29□□□□□ -1.56
ZNF440-201ENST00000304060 APCDD1LQ8NCL9 501 aa5.29□□□□□ -1.56
ZNF440-201ENST00000304060 METTL6Q8TCB7 284 aa5.29□□□□□ -1.56
ZNF440-201ENST00000304060 TFAP2CQ92754 450 aa5.29□□□□□ -1.56
ZNF440-201ENST00000304060 PTP4A1Q93096 173 aa5.29□□□□□ -1.56
ZNF440-201ENST00000304060 TMIGD2Q96BF3 282 aa5.29□□□□□ -1.56
ZNF440-201ENST00000304060 LCORQ96JN0 433 aaPredicted RBP5.29□□□□□ -1.56
ZNF440-201ENST00000304060 COL21A1Q96P44 957 aa5.29□□□□□ -1.56
ZNF440-201ENST00000304060 MACROD1Q9BQ69 325 aa5.29□□□□□ -1.56
ZNF440-201ENST00000304060 PINK1Q9BXM7 581 aa5.29□□□□□ -1.56
ZNF440-201ENST00000304060 ACTR6Q9GZN1 396 aa5.29□□□□□ -1.56
ZNF440-201ENST00000304060 RHOJQ9H4E5 214 aa5.29□□□□□ -1.56
ZNF440-201ENST00000304060 LIN28AQ9H9Z2 209 aaKnown RBP5.29□□□□□ -1.56
ZNF440-201ENST00000304060 Q9N2J8 555 aa5.29□□□□□ -1.56
ZNF440-201ENST00000304060 DDX28Q9NUL7 540 aaKnown RBP5.29□□□□□ -1.56
ZNF440-201ENST00000304060 SPRR3Q9UBC9 169 aa5.29□□□□□ -1.56
ZNF440-201ENST00000304060 PCDHGB1Q9Y5G3 927 aa5.29□□□□□ -1.56
ZNF440-201ENST00000304060 ATP23Q9Y6H3 246 aa5.29□□□□□ -1.56
ZNF440-201ENST00000304060 PCM1Q15154 2024 aa5.29□□□□□ -1.56
ZNF440-201ENST00000304060 SONP18583 2426 aaKnown RBP5.29□□□□□ -1.56
ZNF440-201ENST00000304060 GLRA3O75311 464 aa5.28□□□□□ -1.56
ZNF440-201ENST00000304060 TRIM3O75382 744 aaPredicted RBP5.28□□□□□ -1.56
ZNF440-201ENST00000304060 NMBRP28336 390 aa5.28□□□□□ -1.56
ZNF440-201ENST00000304060 IL12AP29459 219 aa5.28□□□□□ -1.56
ZNF440-201ENST00000304060 SLC9A3P48764 834 aa5.28□□□□□ -1.56
ZNF440-201ENST00000304060 IRF9Q00978 393 aa5.28□□□□□ -1.56
ZNF440-201ENST00000304060 ZNF155Q12901 538 aaPredicted RBP5.28□□□□□ -1.56
ZNF440-201ENST00000304060 CHIT1Q13231 466 aa5.28□□□□□ -1.56
ZNF440-201ENST00000304060 EEF1AKMT2Q5JPI9 291 aaKnown RBP5.28□□□□□ -1.56
ZNF440-201ENST00000304060 RTL6Q6ICC9 239 aa5.28□□□□□ -1.56
ZNF440-201ENST00000304060 CES3Q6UWW8 571 aa5.28□□□□□ -1.56
ZNF440-201ENST00000304060 GPAT4Q86UL3 456 aa5.28□□□□□ -1.56
ZNF440-201ENST00000304060 HIPK4Q8NE63 616 aa5.28□□□□□ -1.56
ZNF440-201ENST00000304060 C17orf47Q8NEP4 570 aa5.28□□□□□ -1.56
ZNF440-201ENST00000304060 IL17RDQ8NFM7 739 aa5.28□□□□□ -1.56
ZNF440-201ENST00000304060 FBXO30Q8TB52 745 aa5.28□□□□□ -1.56
ZNF440-201ENST00000304060 WDYHV1Q96HA8 205 aa5.28□□□□□ -1.56
ZNF440-201ENST00000304060 HMG20AQ9NP66 347 aa5.28□□□□□ -1.56
ZNF440-201ENST00000304060 CISD1Q9NZ45 108 aaKnown RBP5.28□□□□□ -1.56
ZNF440-201ENST00000304060 NUDT4Q9NZJ9 180 aa5.28□□□□□ -1.56
ZNF440-201ENST00000304060 MARCH4Q9P2E8 410 aaPredicted RBP5.28□□□□□ -1.56
ZNF440-201ENST00000304060 KCNK7Q9Y2U2 307 aa5.28□□□□□ -1.56
ZNF440-201ENST00000304060 MRPS18CQ9Y3D5 142 aaKnown RBP5.28□□□□□ -1.56
ZNF440-201ENST00000304060 VPS13AQ96RL7 3174 aa5.28□□□□□ -1.56
ZNF440-201ENST00000304060 CENPEQ02224 2701 aa5.28□□□□□ -1.56
ZNF440-201ENST00000304060 PTAFRP25105 342 aa5.28□□□□□ -1.56
ZNF440-201ENST00000304060 PRKAA2P54646 552 aa5.28□□□□□ -1.56
ZNF440-201ENST00000304060 LIM2P55344 173 aa5.28□□□□□ -1.56
ZNF440-201ENST00000304060 ID2Q02363 134 aa5.28□□□□□ -1.56
ZNF440-201ENST00000304060 LOXL1Q08397 574 aaPredicted RBP5.28□□□□□ -1.56
ZNF440-201ENST00000304060 SLAMF1Q13291 335 aa5.28□□□□□ -1.56
ZNF440-201ENST00000304060 GGTLC2Q14390 218 aa5.28□□□□□ -1.56
ZNF440-201ENST00000304060 KCNJ11Q14654 390 aa5.28□□□□□ -1.56
ZNF440-201ENST00000304060 LPCAT4Q643R3 524 aa5.28□□□□□ -1.56
ZNF440-201ENST00000304060 LARP4Q71RC2 724 aaKnown RBP eCLIP5.28□□□□□ -1.56
ZNF440-201ENST00000304060 PRIMA1Q86XR5 153 aa5.28□□□□□ -1.56
ZNF440-201ENST00000304060 RPRMLQ8N4K4 120 aa5.28□□□□□ -1.56
ZNF440-201ENST00000304060 DTWD1Q8N5C7 304 aa5.28□□□□□ -1.56
ZNF440-201ENST00000304060 ACOT4Q8N9L9 421 aa5.28□□□□□ -1.56
ZNF440-201ENST00000304060 FAM83FQ8NEG4 500 aaPredicted RBP5.28□□□□□ -1.56
ZNF440-201ENST00000304060 OR10G3Q8NGC4 313 aa5.28□□□□□ -1.56
ZNF440-201ENST00000304060 RFWD2Q8NHY2 731 aa5.28□□□□□ -1.56
ZNF440-201ENST00000304060 POLE3Q9NRF9 147 aa5.28□□□□□ -1.56
ZNF440-201ENST00000304060 SYBUQ9NX95 663 aa5.28□□□□□ -1.56
ZNF440-201ENST00000304060 DCDC2Q9UHG0 476 aa5.28□□□□□ -1.56
ZNF440-201ENST00000304060 SLC22A14Q9Y267 594 aa5.28□□□□□ -1.56
ZNF440-201ENST00000304060 PLLPQ9Y342 182 aa5.28□□□□□ -1.56
ZNF440-201ENST00000304060 ITPR2Q14571 2701 aa5.28□□□□□ -1.56
ZNF440-201ENST00000304060 KCNH1O95259 989 aa5.28□□□□□ -1.56
ZNF440-201ENST00000304060 TGFAP01135 160 aa5.28□□□□□ -1.56
ZNF440-201ENST00000304060 MT-ND5P03915 603 aa5.28□□□□□ -1.56
ZNF440-201ENST00000304060 NPPBP16860 134 aa5.28□□□□□ -1.56
ZNF440-201ENST00000304060 CERS1P27544 350 aa5.28□□□□□ -1.56
ZNF440-201ENST00000304060 EIF1P41567 113 aaKnown RBP5.28□□□□□ -1.56
ZNF440-201ENST00000304060 ELK3P41970 407 aa5.28□□□□□ -1.56
ZNF440-201ENST00000304060 TNFRSF17Q02223 184 aa5.28□□□□□ -1.56
ZNF440-201ENST00000304060 CDSNQ15517 529 aa5.28□□□□□ -1.56
ZNF440-201ENST00000304060 ZNF658BQ4V348 819 aaPredicted RBP5.28□□□□□ -1.56
ZNF440-201ENST00000304060 EIPR1Q53HC9 387 aa5.28□□□□□ -1.56
ZNF440-201ENST00000304060 INTS11Q5TA45 600 aaKnown RBP5.28□□□□□ -1.56
ZNF440-201ENST00000304060 ZBTB37Q5TC79 503 aa5.28□□□□□ -1.56
ZNF440-201ENST00000304060 OR4C11Q6IEV9 310 aa5.28□□□□□ -1.56
ZNF440-201ENST00000304060 ZNF544Q6NX49 715 aa5.28□□□□□ -1.56
ZNF440-201ENST00000304060 FKBP9P1Q75LS8 142 aa5.28□□□□□ -1.56
ZNF440-201ENST00000304060 PRSS41Q7RTY9 318 aa5.28□□□□□ -1.56
ZNF440-201ENST00000304060 TSPYL5Q86VY4 417 aaPredicted RBP5.28□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms