RNA–Protein interactions for RNA: ENST00000303354.10

SCN9A-201, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN9A, Length 9,786 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-201ENST00000303354 TAS2R43P59537 309 aa7.27□□□□□ -1.25
SCN9A-201ENST00000303354 C9orf43Q8TAL5 461 aaPredicted RBP7.27□□□□□ -1.25
SCN9A-201ENST00000303354 BPIFA2Q96DR5 249 aa7.27□□□□□ -1.25
SCN9A-201ENST00000303354 EEDO75530 441 aaKnown RBP7.27□□□□□ -1.25
SCN9A-201ENST00000303354 HLA-DMAP28067 261 aa7.27□□□□□ -1.25
SCN9A-201ENST00000303354 CCR2P41597 374 aa7.27□□□□□ -1.25
SCN9A-201ENST00000303354 SLC6A19Q695T7 634 aa7.27□□□□□ -1.25
SCN9A-201ENST00000303354 C19orf48Q6RUI8 117 aa7.27□□□□□ -1.25
SCN9A-201ENST00000303354 TMEM200AQ86VY9 491 aa7.27□□□□□ -1.25
SCN9A-201ENST00000303354 OR4F15Q8NGB8 312 aa7.27□□□□□ -1.25
SCN9A-201ENST00000303354 ZNF597Q96LX8 424 aa7.27□□□□□ -1.25
SCN9A-201ENST00000303354 CDH10Q9Y6N8 788 aa7.27□□□□□ -1.25
SCN9A-201ENST00000303354 JRKO75564 520 aa7.27□□□□□ -1.25
SCN9A-201ENST00000303354 HOXA1P49639 335 aaPredicted RBP7.27□□□□□ -1.25
SCN9A-201ENST00000303354 HYAL1Q12794 435 aa7.27□□□□□ -1.25
SCN9A-201ENST00000303354 DYRK1AQ13627 763 aa7.27□□□□□ -1.25
SCN9A-201ENST00000303354 TBRG1Q3YBR2 411 aa7.27□□□□□ -1.25
SCN9A-201ENST00000303354 TMEM150AQ86TG1 271 aa7.27□□□□□ -1.25
SCN9A-201ENST00000303354 MKRN2Q9H000 416 aaKnown RBP7.27□□□□□ -1.25
SCN9A-201ENST00000303354 APMAPQ9HDC9 416 aa7.27□□□□□ -1.25
SCN9A-201ENST00000303354 NTNG1Q9Y2I2 539 aa7.27□□□□□ -1.25
SCN9A-201ENST00000303354 LOC105369274A0A096LPK9 316 aa7.26□□□□□ -1.25
SCN9A-201ENST00000303354 ZC3H12DA2A288 527 aaKnown RBP7.26□□□□□ -1.25
SCN9A-201ENST00000303354 H0Y8G0 127 aa7.26□□□□□ -1.25
SCN9A-201ENST00000303354 P2RY10O00398 339 aa7.26□□□□□ -1.25
SCN9A-201ENST00000303354 BCAS1O75363 584 aaPredicted RBP7.26□□□□□ -1.25
SCN9A-201ENST00000303354 CRABP1P29762 137 aa7.26□□□□□ -1.25
SCN9A-201ENST00000303354 MTNR1AP48039 350 aa7.26□□□□□ -1.25
SCN9A-201ENST00000303354 VEGFCP49767 419 aa7.26□□□□□ -1.25
SCN9A-201ENST00000303354 RACK1P63244 317 aaKnown RBP7.26□□□□□ -1.25
SCN9A-201ENST00000303354 ZNF674Q2M3X9 581 aa7.26□□□□□ -1.25
SCN9A-201ENST00000303354 PNPLA5Q7Z6Z6 429 aaPredicted RBP7.26□□□□□ -1.25
SCN9A-201ENST00000303354 YTHDF3Q7Z739 585 aaKnown RBP7.26□□□□□ -1.25
SCN9A-201ENST00000303354 FAM185AQ8N0U4 392 aa7.26□□□□□ -1.25
SCN9A-201ENST00000303354 OR4N4Q8N0Y3 316 aa7.26□□□□□ -1.25
SCN9A-201ENST00000303354 C17orf50Q8WW18 174 aa7.26□□□□□ -1.25
SCN9A-201ENST00000303354 ZDHHC16Q969W1 377 aa7.26□□□□□ -1.25
SCN9A-201ENST00000303354 SLC30A2Q9BRI3 323 aa7.26□□□□□ -1.25
SCN9A-201ENST00000303354 HOXD1Q9GZZ0 328 aa7.26□□□□□ -1.25
SCN9A-201ENST00000303354 SAP130Q9H0E3 1048 aa7.26□□□□□ -1.25
SCN9A-201ENST00000303354 OR51B4Q9Y5P0 310 aa7.26□□□□□ -1.25
SCN9A-201ENST00000303354 WIF1Q9Y5W5 379 aa7.26□□□□□ -1.25
SCN9A-201ENST00000303354 OR7C1O76099 320 aaPredicted RBP7.26□□□□□ -1.25
SCN9A-201ENST00000303354 HOXB5P09067 269 aa7.26□□□□□ -1.25
SCN9A-201ENST00000303354 H2AFB2P0C5Z0 115 aa7.26□□□□□ -1.25
SCN9A-201ENST00000303354 DEFA4P12838 97 aa7.26□□□□□ -1.25
SCN9A-201ENST00000303354 ZNF81P51508 661 aa7.26□□□□□ -1.25
SCN9A-201ENST00000303354 PHC1P78364 1004 aa7.26□□□□□ -1.25
SCN9A-201ENST00000303354 TGFBR3Q03167 851 aa7.26□□□□□ -1.25
SCN9A-201ENST00000303354 GLYR1Q49A26 553 aaPredicted RBP7.26□□□□□ -1.25
SCN9A-201ENST00000303354 TMEM178AQ8NBL3 297 aa7.26□□□□□ -1.25
SCN9A-201ENST00000303354 TMEM269A0A1B0GVZ9 245 aa7.26□□□□□ -1.25
SCN9A-201ENST00000303354 DVL2O14641 736 aa7.26□□□□□ -1.25
SCN9A-201ENST00000303354 CD27P26842 260 aa7.26□□□□□ -1.25
SCN9A-201ENST00000303354 MGAT3Q09327 533 aa7.26□□□□□ -1.25
SCN9A-201ENST00000303354 TOX2Q96NM4 488 aa7.26□□□□□ -1.25
SCN9A-201ENST00000303354 SPHK1Q9NYA1 384 aa7.26□□□□□ -1.25
SCN9A-201ENST00000303354 ADAMTS5Q9UNA0 930 aa7.26□□□□□ -1.25
SCN9A-201ENST00000303354 TP53TG5Q9Y2B4 290 aa7.26□□□□□ -1.25
SCN9A-201ENST00000303354 BAZ2AQ9UIF9 1905 aaKnown RBP7.26□□□□□ -1.25
SCN9A-201ENST00000303354 SLC22A31A6NKX4 558 aa7.26□□□□□ -1.25
SCN9A-201ENST00000303354 TMX2-CTNND1H3BSU7 103 aa7.26□□□□□ -1.25
SCN9A-201ENST00000303354 LCN1P31025 176 aa7.26□□□□□ -1.25
SCN9A-201ENST00000303354 NKX3-2P78367 333 aa7.26□□□□□ -1.25
SCN9A-201ENST00000303354 SLC22A10Q63ZE4 541 aa7.26□□□□□ -1.25
SCN9A-201ENST00000303354 TPRA1Q86W33 373 aa7.26□□□□□ -1.25
SCN9A-201ENST00000303354 RHEBL1Q8TAI7 183 aa7.26□□□□□ -1.25
SCN9A-201ENST00000303354 ADAMTS16Q8TE57 1224 aa7.26□□□□□ -1.25
SCN9A-201ENST00000303354 ROBO4Q8WZ75 1007 aa7.26□□□□□ -1.25
SCN9A-201ENST00000303354 PSMF1Q92530 271 aa7.26□□□□□ -1.25
SCN9A-201ENST00000303354 ELSPBP1Q96BH3 223 aa7.26□□□□□ -1.25
SCN9A-201ENST00000303354 FGF22Q9HCT0 170 aa7.26□□□□□ -1.25
SCN9A-201ENST00000303354 SLAMF8Q9P0V8 285 aa7.26□□□□□ -1.25
SCN9A-201ENST00000303354 DOT1LQ8TEK3 1739 aa7.26□□□□□ -1.25
SCN9A-201ENST00000303354 ZCWPW2A0A1B0GU75 182 aa7.26□□□□□ -1.25
SCN9A-201ENST00000303354 CD34P28906 385 aa7.26□□□□□ -1.25
SCN9A-201ENST00000303354 ART1P52961 327 aa7.26□□□□□ -1.25
SCN9A-201ENST00000303354 GPR50Q13585 617 aa7.26□□□□□ -1.25
SCN9A-201ENST00000303354 SELPLGQ14242 412 aa7.26□□□□□ -1.25
SCN9A-201ENST00000303354 SF3B4Q15427 424 aaKnown RBP eCLIP7.26□□□□□ -1.25
SCN9A-201ENST00000303354 PODNL1Q6PEZ8 512 aa7.26□□□□□ -1.25
SCN9A-201ENST00000303354 CXorf67Q86X51 503 aaPredicted RBP7.26□□□□□ -1.25
SCN9A-201ENST00000303354 ACBD7Q8N6N7 88 aa7.26□□□□□ -1.25
SCN9A-201ENST00000303354 BMFQ96LC9 184 aa7.26□□□□□ -1.25
SCN9A-201ENST00000303354 NGBQ9NPG2 151 aa7.26□□□□□ -1.25
SCN9A-201ENST00000303354 PTTG3PQ9NZH4 202 aa7.26□□□□□ -1.25
SCN9A-201ENST00000303354 EMC3Q9P0I2 261 aa7.26□□□□□ -1.25
SCN9A-201ENST00000303354 YIF1AO95070 293 aa7.26□□□□□ -1.25
SCN9A-201ENST00000303354 CD1CP29017 333 aa7.26□□□□□ -1.25
SCN9A-201ENST00000303354 CD79BP40259 229 aa7.26□□□□□ -1.25
SCN9A-201ENST00000303354 GFERP55789 205 aa7.26□□□□□ -1.25
SCN9A-201ENST00000303354 C15orf39Q6ZRI6 1047 aa7.26□□□□□ -1.25
SCN9A-201ENST00000303354 SSX9Q7RTT3 188 aa7.26□□□□□ -1.25
SCN9A-201ENST00000303354 SPAG16Q8N0X2 631 aa7.26□□□□□ -1.25
SCN9A-201ENST00000303354 OR56B2PQ8NGI1 322 aa7.26□□□□□ -1.25
SCN9A-201ENST00000303354 AGPAT4Q9NRZ5 378 aa7.26□□□□□ -1.25
SCN9A-201ENST00000303354 PHRF1Q9P1Y6 1649 aaKnown RBP7.26□□□□□ -1.25
SCN9A-201ENST00000303354 ACOD1A6NK06 481 aa7.26□□□□□ -1.25
SCN9A-201ENST00000303354 CNIH1O95406 144 aa7.26□□□□□ -1.25
SCN9A-201ENST00000303354 ABHD16AO95870 558 aa7.26□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 105.4 ms