RNA–Protein interactions for RNA: ENST00000302085.8

SMAD1-201, Transcript of SMAD family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMAD1, Length 1,966 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-201ENST00000302085 P2RY8Q86VZ1 359 aa20.37■□□□□ 0.85
SMAD1-201ENST00000302085 NUBPLQ8TB37 319 aa20.37■□□□□ 0.85
SMAD1-201ENST00000302085 THAP3Q8WTV1 239 aaPredicted RBP20.37■□□□□ 0.85
SMAD1-201ENST00000302085 MR1Q95460 341 aa20.37■□□□□ 0.85
SMAD1-201ENST00000302085 IFT27Q9BW83 186 aa20.37■□□□□ 0.85
SMAD1-201ENST00000302085 ULBP3Q9BZM4 244 aa20.37■□□□□ 0.85
SMAD1-201ENST00000302085 OR6C70A6NIJ9 312 aa20.37■□□□□ 0.85
SMAD1-201ENST00000302085 PSPHP78330 225 aa20.37■□□□□ 0.85
SMAD1-201ENST00000302085 KLHL22Q53GT1 634 aa20.37■□□□□ 0.85
SMAD1-201ENST00000302085 ARMCX4Q5H9R4 360 aa20.37■□□□□ 0.85
SMAD1-201ENST00000302085 SLC35F1Q5T1Q4 408 aa20.37■□□□□ 0.85
SMAD1-201ENST00000302085 ZNF367Q7RTV3 350 aa20.37■□□□□ 0.85
SMAD1-201ENST00000302085 BBS1Q8NFJ9 593 aa20.37■□□□□ 0.85
SMAD1-201ENST00000302085 RNFT2Q96EX2 444 aa20.37■□□□□ 0.85
SMAD1-201ENST00000302085 BCL7BQ9BQE9 202 aa20.37■□□□□ 0.85
SMAD1-201ENST00000302085 TBL1XR1Q9BZK7 514 aa20.37■□□□□ 0.85
SMAD1-201ENST00000302085 GPN3Q9UHW5 284 aaPredicted RBP20.37■□□□□ 0.85
SMAD1-201ENST00000302085 KIF26BQ2KJY2 2108 aa20.36■□□□□ 0.85
SMAD1-201ENST00000302085 TEX51A0A1B0GUA7 166 aa20.36■□□□□ 0.85
SMAD1-201ENST00000302085 B4E171 279 aa20.36■□□□□ 0.85
SMAD1-201ENST00000302085 HCRTR2O43614 444 aa20.36■□□□□ 0.85
SMAD1-201ENST00000302085 EIF4E2O60573 245 aaKnown RBP20.36■□□□□ 0.85
SMAD1-201ENST00000302085 CYC1P08574 325 aa20.36■□□□□ 0.85
SMAD1-201ENST00000302085 ZNF182P17025 639 aaPredicted RBP20.36■□□□□ 0.85
SMAD1-201ENST00000302085 TSPAN7P41732 249 aa20.36■□□□□ 0.85
SMAD1-201ENST00000302085 NRG3P56975 720 aa20.36■□□□□ 0.85
SMAD1-201ENST00000302085 SLC26A5P58743 744 aa20.36■□□□□ 0.85
SMAD1-201ENST00000302085 FAM198BQ6UWH4 519 aa20.36■□□□□ 0.85
SMAD1-201ENST00000302085 CPOQ8IVL8 374 aa20.36■□□□□ 0.85
SMAD1-201ENST00000302085 LRRC17Q8N6Y2 441 aa20.36■□□□□ 0.85
SMAD1-201ENST00000302085 CCNL2Q96S94 520 aaPredicted RBP20.36■□□□□ 0.85
SMAD1-201ENST00000302085 HINT3Q9NQE9 182 aaKnown RBP20.36■□□□□ 0.85
SMAD1-201ENST00000302085 C19orf25Q9UFG5 118 aaPredicted RBP20.36■□□□□ 0.85
SMAD1-201ENST00000302085 NXT1Q9UKK6 140 aaKnown RBP20.36■□□□□ 0.85
SMAD1-201ENST00000302085 DIMT1Q9UNQ2 313 aaKnown RBP20.36■□□□□ 0.85
SMAD1-201ENST00000302085 LSM2Q9Y333 95 aaKnown RBP20.36■□□□□ 0.85
SMAD1-201ENST00000302085 ELOA3DA6NLF2 546 aaPredicted RBP20.35■□□□□ 0.85
SMAD1-201ENST00000302085 SNTNA6NMZ2 147 aa20.35■□□□□ 0.85
SMAD1-201ENST00000302085 LRRN3E7EW58 273 aa20.35■□□□□ 0.85
SMAD1-201ENST00000302085 WWP2O00308 870 aa20.35■□□□□ 0.85
SMAD1-201ENST00000302085 ADAM10O14672 748 aa20.35■□□□□ 0.85
SMAD1-201ENST00000302085 PPM1BO75688 479 aa20.35■□□□□ 0.85
SMAD1-201ENST00000302085 PNMTP11086 282 aa20.35■□□□□ 0.85
SMAD1-201ENST00000302085 SLC6A8P48029 635 aa20.35■□□□□ 0.85
SMAD1-201ENST00000302085 MTNR1AP48039 350 aa20.35■□□□□ 0.85
SMAD1-201ENST00000302085 FOXK2Q01167 660 aa20.35■□□□□ 0.85
SMAD1-201ENST00000302085 ELOA3BQ3SY89 546 aa20.35■□□□□ 0.85
SMAD1-201ENST00000302085 RTL4Q6ZR62 310 aa20.35■□□□□ 0.85
SMAD1-201ENST00000302085 SLC46A3Q7Z3Q1 461 aa20.35■□□□□ 0.85
SMAD1-201ENST00000302085 ELOA3Q8NG57 546 aa20.35■□□□□ 0.85
SMAD1-201ENST00000302085 ADAM19Q9H013 955 aa20.35■□□□□ 0.85
SMAD1-201ENST00000302085 FGF20Q9NP95 211 aaPredicted RBP20.35■□□□□ 0.85
SMAD1-201ENST00000302085 GALR2O43603 387 aaPredicted RBP20.35■□□□□ 0.85
SMAD1-201ENST00000302085 GMFGO60234 142 aa20.35■□□□□ 0.85
SMAD1-201ENST00000302085 NADKO95544 446 aaPredicted RBP20.35■□□□□ 0.85
SMAD1-201ENST00000302085 RAB36O95755 333 aa20.35■□□□□ 0.85
SMAD1-201ENST00000302085 HSMCR30P0CW71 290 aa20.35■□□□□ 0.85
SMAD1-201ENST00000302085 EVI2BP34910 448 aa20.35■□□□□ 0.85
SMAD1-201ENST00000302085 CDH11P55287 796 aa20.35■□□□□ 0.85
SMAD1-201ENST00000302085 LSM3P62310 102 aaKnown RBP20.35■□□□□ 0.85
SMAD1-201ENST00000302085 RAB40BQ12829 278 aa20.35■□□□□ 0.85
SMAD1-201ENST00000302085 MED22Q15528 200 aa20.35■□□□□ 0.85
SMAD1-201ENST00000302085 CCDC157Q569K6 752 aa20.35■□□□□ 0.85
SMAD1-201ENST00000302085 PAQR6Q6TCH4 344 aa20.35■□□□□ 0.85
SMAD1-201ENST00000302085 ZNF517Q6ZMY9 492 aaPredicted RBP20.35■□□□□ 0.85
SMAD1-201ENST00000302085 NANOGP1Q8N7R0 232 aa20.35■□□□□ 0.85
SMAD1-201ENST00000302085 OR8K3Q8NH51 312 aa20.35■□□□□ 0.85
SMAD1-201ENST00000302085 ZNF563Q8TA94 476 aa20.35■□□□□ 0.85
SMAD1-201ENST00000302085 RPL3LQ92901 407 aaKnown RBP20.35■□□□□ 0.85
SMAD1-201ENST00000302085 DEPDC7Q96QD5 511 aa20.35■□□□□ 0.85
SMAD1-201ENST00000302085 CMKLR1Q99788 373 aa20.35■□□□□ 0.85
SMAD1-201ENST00000302085 SLC19A3Q9BZV2 496 aa20.35■□□□□ 0.85
SMAD1-201ENST00000302085 ERGIC3Q9Y282 383 aa20.35■□□□□ 0.85
SMAD1-201ENST00000302085 TTC28Q96AY4 2481 aa20.35■□□□□ 0.85
SMAD1-201ENST00000302085 DMDP11532 3685 aa20.34■□□□□ 0.85
SMAD1-201ENST00000302085 FAM86C2PA6NEL3 165 aa20.34■□□□□ 0.85
SMAD1-201ENST00000302085 FAM183AA6NL82 134 aa20.34■□□□□ 0.85
SMAD1-201ENST00000302085 SCO2O43819 266 aa20.34■□□□□ 0.85
SMAD1-201ENST00000302085 APOL3O95236 402 aa20.34■□□□□ 0.85
SMAD1-201ENST00000302085 UMODP07911 640 aa20.34■□□□□ 0.85
SMAD1-201ENST00000302085 SLC1A3P43003 542 aa20.34■□□□□ 0.85
SMAD1-201ENST00000302085 TOMM34Q15785 309 aaPredicted RBP20.34■□□□□ 0.85
SMAD1-201ENST00000302085 ZNF362Q5T0B9 420 aaPredicted RBP20.34■□□□□ 0.85
SMAD1-201ENST00000302085 NXNL2Q5VZ03 156 aa20.34■□□□□ 0.85
SMAD1-201ENST00000302085 GALNT6Q8NCL4 622 aa20.34■□□□□ 0.85
SMAD1-201ENST00000302085 MGLLQ99685 303 aa20.34■□□□□ 0.85
SMAD1-201ENST00000302085 TAPBPLQ9BX59 468 aa20.34■□□□□ 0.85
SMAD1-201ENST00000302085 B3GALT1Q9Y5Z6 326 aa20.34■□□□□ 0.85
SMAD1-201ENST00000302085 KMT2EQ8IZD2 1858 aa20.34■□□□□ 0.85
SMAD1-201ENST00000302085 OR7A10O76100 309 aa20.34■□□□□ 0.85
SMAD1-201ENST00000302085 PPP1R3DO95685 299 aa20.34■□□□□ 0.85
SMAD1-201ENST00000302085 ENDOUP21128 410 aaKnown RBP20.34■□□□□ 0.85
SMAD1-201ENST00000302085 TACR3P29371 465 aa20.34■□□□□ 0.85
SMAD1-201ENST00000302085 ETV5P41161 510 aa20.34■□□□□ 0.85
SMAD1-201ENST00000302085 RGS6P49758 472 aa20.34■□□□□ 0.85
SMAD1-201ENST00000302085 ETV1P50549 477 aa20.34■□□□□ 0.85
SMAD1-201ENST00000302085 FBXW4P57775 412 aa20.34■□□□□ 0.85
SMAD1-201ENST00000302085 ROR2Q01974 943 aaKnown RBP20.34■□□□□ 0.85
SMAD1-201ENST00000302085 TMEM44Q2T9K0 475 aa20.34■□□□□ 0.85
SMAD1-201ENST00000302085 CXXC5Q7LFL8 322 aaKnown RBP20.34■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms