RNA–Protein interactions for RNA: ENST00000301019.8

CDT1-201, Transcript of chromatin licensing and DNA replication factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDT1, Length 3,240 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1-201ENST00000301019 S100PBPQ96BU1 408 aa13.38□□□□□ -0.27
CDT1-201ENST00000301019 CLCC1Q96S66 551 aa13.38□□□□□ -0.27
CDT1-201ENST00000301019 ZNF334Q9HCZ1 680 aaPredicted RBP13.38□□□□□ -0.27
CDT1-201ENST00000301019 AKAP7Q9P0M2 348 aaPredicted RBP13.38□□□□□ -0.27
CDT1-201ENST00000301019 CACNA1IQ9P0X4 2223 aa13.38□□□□□ -0.27
CDT1-201ENST00000301019 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP13.38□□□□□ -0.27
CDT1-201ENST00000301019 RAD1O60671 282 aa13.38□□□□□ -0.27
CDT1-201ENST00000301019 GJB5O95377 273 aa13.38□□□□□ -0.27
CDT1-201ENST00000301019 RB1P06400 928 aa13.38□□□□□ -0.27
CDT1-201ENST00000301019 SOX2P48431 317 aa13.38□□□□□ -0.27
CDT1-201ENST00000301019 EPHA4P54764 986 aa13.38□□□□□ -0.27
CDT1-201ENST00000301019 GMFBP60983 142 aa13.38□□□□□ -0.27
CDT1-201ENST00000301019 EEF1A2Q05639 463 aaKnown RBP13.38□□□□□ -0.27
CDT1-201ENST00000301019 ZNF177Q13360 481 aaPredicted RBP13.38□□□□□ -0.27
CDT1-201ENST00000301019 THEM5Q8N1Q8 247 aa13.38□□□□□ -0.27
CDT1-201ENST00000301019 ACBD7Q8N6N7 88 aa13.38□□□□□ -0.27
CDT1-201ENST00000301019 ACOT11Q8WXI4 607 aaPredicted RBP13.38□□□□□ -0.27
CDT1-201ENST00000301019 ELF4Q99607 663 aaPredicted RBP13.38□□□□□ -0.27
CDT1-201ENST00000301019 ACBD6Q9BR61 282 aa13.38□□□□□ -0.27
CDT1-201ENST00000301019 PIGQQ9BRB3 760 aa13.38□□□□□ -0.27
CDT1-201ENST00000301019 MARK1Q9P0L2 795 aa13.38□□□□□ -0.27
CDT1-201ENST00000301019 SPAG17Q6Q759 2223 aa13.38□□□□□ -0.27
CDT1-201ENST00000301019 PDCD11Q14690 1871 aaKnown RBP13.38□□□□□ -0.27
CDT1-201ENST00000301019 TRIP12Q14669 1992 aaPredicted RBP13.38□□□□□ -0.27
CDT1-201ENST00000301019 A0A1B0GV50 99 aa13.37□□□□□ -0.27
CDT1-201ENST00000301019 IDSB3KWA1 339 aa13.37□□□□□ -0.27
CDT1-201ENST00000301019 DPM1O60762 260 aa13.37□□□□□ -0.27
CDT1-201ENST00000301019 C8orf89P0DMQ9 161 aa13.37□□□□□ -0.27
CDT1-201ENST00000301019 AKR1A1P14550 325 aa13.37□□□□□ -0.27
CDT1-201ENST00000301019 IFNGR1P15260 489 aa13.37□□□□□ -0.27
CDT1-201ENST00000301019 MTNR1BP49286 362 aa13.37□□□□□ -0.27
CDT1-201ENST00000301019 RAB5BP61020 215 aa13.37□□□□□ -0.27
CDT1-201ENST00000301019 ZNF763Q0D2J5 394 aa13.37□□□□□ -0.27
CDT1-201ENST00000301019 FZD5Q13467 585 aa13.37□□□□□ -0.27
CDT1-201ENST00000301019 ZNF750Q32MQ0 723 aa13.37□□□□□ -0.27
CDT1-201ENST00000301019 ZNF783Q6ZMS7 281 aa13.37□□□□□ -0.27
CDT1-201ENST00000301019 TTLL10Q6ZVT0 673 aa13.37□□□□□ -0.27
CDT1-201ENST00000301019 TMEM169Q96HH4 297 aa13.37□□□□□ -0.27
CDT1-201ENST00000301019 AP5M1Q9H0R1 490 aa13.37□□□□□ -0.27
CDT1-201ENST00000301019 WBP1LQ9NX94 342 aa13.37□□□□□ -0.27
CDT1-201ENST00000301019 GPR55Q9Y2T6 319 aaPredicted RBP13.37□□□□□ -0.27
CDT1-201ENST00000301019 NPTNQ9Y639 398 aa13.37□□□□□ -0.27
CDT1-201ENST00000301019 ZSWIM8A7E2V4 1837 aa13.37□□□□□ -0.27
CDT1-201ENST00000301019 A0A0G2JK05 382 aa13.37□□□□□ -0.27
CDT1-201ENST00000301019 PQLC2LA1A4F0 135 aa13.37□□□□□ -0.27
CDT1-201ENST00000301019 FAM86C2PA6NEL3 165 aa13.37□□□□□ -0.27
CDT1-201ENST00000301019 OR2AT4A6NND4 320 aa13.37□□□□□ -0.27
CDT1-201ENST00000301019 FBXO45P0C2W1 286 aa13.37□□□□□ -0.27
CDT1-201ENST00000301019 PCBP3P57721 371 aaKnown RBP13.37□□□□□ -0.27
CDT1-201ENST00000301019 HTRA3P83110 453 aa13.37□□□□□ -0.27
CDT1-201ENST00000301019 ARF5P84085 180 aa13.37□□□□□ -0.27
CDT1-201ENST00000301019 B4GALNT1Q00973 533 aa13.37□□□□□ -0.27
CDT1-201ENST00000301019 IKZF1Q13422 519 aa13.37□□□□□ -0.27
CDT1-201ENST00000301019 UBXN2BQ14CS0 331 aa13.37□□□□□ -0.27
CDT1-201ENST00000301019 UPP1Q16831 310 aa13.37□□□□□ -0.27
CDT1-201ENST00000301019 TSSK4Q6SA08 328 aa13.37□□□□□ -0.27
CDT1-201ENST00000301019 ZNF836Q6ZNA1 936 aa13.37□□□□□ -0.27
CDT1-201ENST00000301019 C6orf120Q7Z4R8 191 aa13.37□□□□□ -0.27
CDT1-201ENST00000301019 SGK3Q96BR1 496 aa13.37□□□□□ -0.27
CDT1-201ENST00000301019 MACROD1Q9BQ69 325 aa13.37□□□□□ -0.27
CDT1-201ENST00000301019 ZMAT3Q9HA38 289 aaKnown RBP13.37□□□□□ -0.27
CDT1-201ENST00000301019 GPN1Q9HCN4 374 aaPredicted RBP13.37□□□□□ -0.27
CDT1-201ENST00000301019 KANTRA0A1W2PQU2 76 aa13.37□□□□□ -0.27
CDT1-201ENST00000301019 RNASET2O00584 256 aaKnown RBP13.37□□□□□ -0.27
CDT1-201ENST00000301019 YIF1AO95070 293 aa13.37□□□□□ -0.27
CDT1-201ENST00000301019 LATS1O95835 1130 aa13.37□□□□□ -0.27
CDT1-201ENST00000301019 F2P00734 622 aa13.37□□□□□ -0.27
CDT1-201ENST00000301019 STAT5AP42229 794 aa13.37□□□□□ -0.27
CDT1-201ENST00000301019 MMP15P51511 669 aa13.37□□□□□ -0.27
CDT1-201ENST00000301019 SLBPQ14493 270 aaKnown RBP eCLIP13.37□□□□□ -0.27
CDT1-201ENST00000301019 PEA15Q15121 130 aa13.37□□□□□ -0.27
CDT1-201ENST00000301019 ELAVL1Q15717 326 aaKnown RBP13.37□□□□□ -0.27
CDT1-201ENST00000301019 PCGF3Q3KNV8 242 aa13.37□□□□□ -0.27
CDT1-201ENST00000301019 TMEM69Q5SWH9 247 aa13.37□□□□□ -0.27
CDT1-201ENST00000301019 OTPQ5XKR4 325 aa13.37□□□□□ -0.27
CDT1-201ENST00000301019 OR52W1Q6IF63 320 aa13.37□□□□□ -0.27
CDT1-201ENST00000301019 AGTRAPQ6RW13 159 aa13.37□□□□□ -0.27
CDT1-201ENST00000301019 ZNF761Q86XN6 746 aaPredicted RBP13.37□□□□□ -0.27
CDT1-201ENST00000301019 ETFBKMTQ8IXQ9 262 aa13.37□□□□□ -0.27
CDT1-201ENST00000301019 ZNF565Q8N9K5 539 aa13.37□□□□□ -0.27
CDT1-201ENST00000301019 ZNF485Q8NCK3 441 aa13.37□□□□□ -0.27
CDT1-201ENST00000301019 C16orf78Q8WTQ4 265 aa13.37□□□□□ -0.27
CDT1-201ENST00000301019 VRK1Q99986 396 aaPredicted RBP13.37□□□□□ -0.27
CDT1-201ENST00000301019 MAN2C1Q9NTJ4 1040 aa13.37□□□□□ -0.27
CDT1-201ENST00000301019 ZFP57Q9NU63 452 aa13.37□□□□□ -0.27
CDT1-201ENST00000301019 RNF186Q9NXI6 227 aa13.37□□□□□ -0.27
CDT1-201ENST00000301019 ZNF629Q9UEG4 869 aaPredicted RBP13.37□□□□□ -0.27
CDT1-201ENST00000301019 PLAGL1Q9UM63 463 aa13.37□□□□□ -0.27
CDT1-201ENST00000301019 Q9Y3F1 56 aa13.37□□□□□ -0.27
CDT1-201ENST00000301019 PQBP1O60828 265 aaKnown RBP13.36□□□□□ -0.27
CDT1-201ENST00000301019 B4GALT2O60909 372 aa13.36□□□□□ -0.27
CDT1-201ENST00000301019 CLN5O75503 358 aa13.36□□□□□ -0.27
CDT1-201ENST00000301019 CLTBP09497 229 aa13.36□□□□□ -0.27
CDT1-201ENST00000301019 G0S2P27469 103 aa13.36□□□□□ -0.27
CDT1-201ENST00000301019 VEGFBP49765 207 aa13.36□□□□□ -0.27
CDT1-201ENST00000301019 CDK5Q00535 292 aa13.36□□□□□ -0.27
CDT1-201ENST00000301019 STX4Q12846 297 aa13.36□□□□□ -0.27
CDT1-201ENST00000301019 FAM69AQ5T7M9 428 aa13.36□□□□□ -0.27
CDT1-201ENST00000301019 BEST3Q8N1M1 668 aa13.36□□□□□ -0.27
CDT1-201ENST00000301019 NXPE1Q8N323 547 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms