RNA–Protein interactions for RNA: ENST00000299333.7

SCN3B-201, Transcript of sodium voltage-gated channel beta subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN3B, Length 5,665 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3B-201ENST00000299333 KITLGP21583 273 aa13.95□□□□□ -0.18
SCN3B-201ENST00000299333 APEX1P27695 318 aaKnown RBP13.95□□□□□ -0.18
SCN3B-201ENST00000299333 SERPINA11Q86U17 422 aa13.95□□□□□ -0.18
SCN3B-201ENST00000299333 TP53INP2Q8IXH6 220 aa13.95□□□□□ -0.18
SCN3B-201ENST00000299333 OR10Z1Q8NGY1 313 aa13.95□□□□□ -0.18
SCN3B-201ENST00000299333 OR1E3Q8WZA6 343 aa13.95□□□□□ -0.18
SCN3B-201ENST00000299333 SCLYQ96I15 445 aa13.95□□□□□ -0.18
SCN3B-201ENST00000299333 RBM24Q9BX46 236 aaKnown RBP13.95□□□□□ -0.18
SCN3B-201ENST00000299333 NFKBIEO00221 500 aa13.94□□□□□ -0.18
SCN3B-201ENST00000299333 FKTNO75072 461 aa13.94□□□□□ -0.18
SCN3B-201ENST00000299333 DHPSP49366 369 aaPredicted RBP13.94□□□□□ -0.18
SCN3B-201ENST00000299333 RPS15AP62244 130 aaKnown RBP13.94□□□□□ -0.18
SCN3B-201ENST00000299333 RPS25P62851 125 aaKnown RBP13.94□□□□□ -0.18
SCN3B-201ENST00000299333 HNF4GQ14541 408 aa13.94□□□□□ -0.18
SCN3B-201ENST00000299333 ZNF805Q5CZA5 627 aa13.94□□□□□ -0.18
SCN3B-201ENST00000299333 FAM69BQ5VUD6 431 aa13.94□□□□□ -0.18
SCN3B-201ENST00000299333 UNC5DQ6UXZ4 953 aa13.94□□□□□ -0.18
SCN3B-201ENST00000299333 NAA40Q86UY6 237 aa13.94□□□□□ -0.18
SCN3B-201ENST00000299333 SPTSSAQ969W0 71 aa13.94□□□□□ -0.18
SCN3B-201ENST00000299333 MARC2Q969Z3 335 aa13.94□□□□□ -0.18
SCN3B-201ENST00000299333 FKRPQ9H9S5 495 aa13.94□□□□□ -0.18
SCN3B-201ENST00000299333 SCPEP1Q9HB40 452 aa13.94□□□□□ -0.18
SCN3B-201ENST00000299333 ZCWPW2A0A1B0GU75 182 aa13.94□□□□□ -0.18
SCN3B-201ENST00000299333 TUBAL3A6NHL2 446 aa13.94□□□□□ -0.18
SCN3B-201ENST00000299333 LEFTY2O00292 366 aa13.94□□□□□ -0.18
SCN3B-201ENST00000299333 SLC43A1O75387 559 aa13.94□□□□□ -0.18
SCN3B-201ENST00000299333 RAB40ALP0C0E4 278 aa13.94□□□□□ -0.18
SCN3B-201ENST00000299333 ACP2P11117 423 aa13.94□□□□□ -0.18
SCN3B-201ENST00000299333 SERPINA2P20848 420 aa13.94□□□□□ -0.18
SCN3B-201ENST00000299333 IRF4Q15306 451 aa13.94□□□□□ -0.18
SCN3B-201ENST00000299333 FJX1Q86VR8 437 aa13.94□□□□□ -0.18
SCN3B-201ENST00000299333 OR5D14Q8NGL3 314 aa13.94□□□□□ -0.18
SCN3B-201ENST00000299333 RAB40AQ8WXH6 277 aa13.94□□□□□ -0.18
SCN3B-201ENST00000299333 SGK3Q96BR1 496 aa13.94□□□□□ -0.18
SCN3B-201ENST00000299333 BMFQ96LC9 184 aa13.94□□□□□ -0.18
SCN3B-201ENST00000299333 C12orf42Q96LP6 360 aa13.94□□□□□ -0.18
SCN3B-201ENST00000299333 EGLN3Q9H6Z9 239 aa13.94□□□□□ -0.18
SCN3B-201ENST00000299333 C1GALT1Q9NS00 363 aa13.94□□□□□ -0.18
SCN3B-201ENST00000299333 FGF4P08620 206 aa13.94□□□□□ -0.18
SCN3B-201ENST00000299333 IRF2P14316 349 aa13.94□□□□□ -0.18
SCN3B-201ENST00000299333 ZNF43P17038 809 aa13.94□□□□□ -0.18
SCN3B-201ENST00000299333 FBLP22087 321 aaKnown RBP13.94□□□□□ -0.18
SCN3B-201ENST00000299333 MAOBP27338 520 aa13.94□□□□□ -0.18
SCN3B-201ENST00000299333 CRABP1P29762 137 aa13.94□□□□□ -0.18
SCN3B-201ENST00000299333 CLDN12P56749 244 aa13.94□□□□□ -0.18
SCN3B-201ENST00000299333 RAB6CQ53S08 254 aa13.94□□□□□ -0.18
SCN3B-201ENST00000299333 ZNF789Q5FWF6 425 aa13.94□□□□□ -0.18
SCN3B-201ENST00000299333 MEPCEQ7L2J0 689 aaKnown RBP13.94□□□□□ -0.18
SCN3B-201ENST00000299333 NIPSNAP3BQ9BS92 247 aa13.94□□□□□ -0.18
SCN3B-201ENST00000299333 RAB6CQ9H0N0 254 aa13.94□□□□□ -0.18
SCN3B-201ENST00000299333 TLR9Q9NR96 1032 aa13.94□□□□□ -0.18
SCN3B-201ENST00000299333 TRAV27A0A087WT01 109 aa13.94□□□□□ -0.18
SCN3B-201ENST00000299333 HIDE1A8MVS5 230 aa13.94□□□□□ -0.18
SCN3B-201ENST00000299333 FTCDNL1E5RQL4 147 aa13.94□□□□□ -0.18
SCN3B-201ENST00000299333 DBHP09172 617 aa13.94□□□□□ -0.18
SCN3B-201ENST00000299333 TEAD2Q15562 447 aa13.94□□□□□ -0.18
SCN3B-201ENST00000299333 LY6G5CQ5SRR4 150 aa13.94□□□□□ -0.18
SCN3B-201ENST00000299333 BRICD5Q6PL45 260 aa13.94□□□□□ -0.18
SCN3B-201ENST00000299333 LARP4Q71RC2 724 aaKnown RBP eCLIP13.94□□□□□ -0.18
SCN3B-201ENST00000299333 OR7G3Q8NG95 312 aa13.94□□□□□ -0.18
SCN3B-201ENST00000299333 SAT2Q96F10 170 aaPredicted RBP13.94□□□□□ -0.18
SCN3B-201ENST00000299333 KCNIP2Q9NS61 270 aa13.94□□□□□ -0.18
SCN3B-201ENST00000299333 GPR39O43194 453 aa13.93□□□□□ -0.18
SCN3B-201ENST00000299333 ZNF780AO75290 641 aaPredicted RBP13.93□□□□□ -0.18
SCN3B-201ENST00000299333 TCRBP04435 133 aa13.93□□□□□ -0.18
SCN3B-201ENST00000299333 TLE4Q04727 773 aa13.93□□□□□ -0.18
SCN3B-201ENST00000299333 SLC51BQ86UW2 128 aa13.93□□□□□ -0.18
SCN3B-201ENST00000299333 LYSMD2Q8IV50 215 aa13.93□□□□□ -0.18
SCN3B-201ENST00000299333 UMODL1-AS1Q8N2C9 162 aa13.93□□□□□ -0.18
SCN3B-201ENST00000299333 J3KTA2 159 aa13.93□□□□□ -0.18
SCN3B-201ENST00000299333 ALPLP05186 524 aa13.93□□□□□ -0.18
SCN3B-201ENST00000299333 EEF1A2Q05639 463 aaKnown RBP13.93□□□□□ -0.18
SCN3B-201ENST00000299333 ZNF74Q16587 644 aa13.93□□□□□ -0.18
SCN3B-201ENST00000299333 SLX4IPQ5VYV7 408 aa13.93□□□□□ -0.18
SCN3B-201ENST00000299333 LRP10Q7Z4F1 713 aa13.93□□□□□ -0.18
SCN3B-201ENST00000299333 TPRA1Q86W33 373 aa13.93□□□□□ -0.18
SCN3B-201ENST00000299333 PEX11GQ96HA9 241 aa13.93□□□□□ -0.18
SCN3B-201ENST00000299333 FOXN4Q96NZ1 517 aa13.93□□□□□ -0.18
SCN3B-201ENST00000299333 OR52A5Q9H2C5 316 aa13.93□□□□□ -0.18
SCN3B-201ENST00000299333 EMC7Q9NPA0 242 aa13.93□□□□□ -0.18
SCN3B-201ENST00000299333 PHOX2AO14813 284 aa13.93□□□□□ -0.18
SCN3B-201ENST00000299333 GPR32O75388 356 aa13.93□□□□□ -0.18
SCN3B-201ENST00000299333 OR13C7P0DN81 318 aa13.93□□□□□ -0.18
SCN3B-201ENST00000299333 HOXB2P14652 356 aa13.93□□□□□ -0.18
SCN3B-201ENST00000299333 ARRB1P49407 418 aaPredicted RBP13.93□□□□□ -0.18
SCN3B-201ENST00000299333 CCR6P51684 374 aa13.93□□□□□ -0.18
SCN3B-201ENST00000299333 ZNF91Q05481 1191 aa13.93□□□□□ -0.18
SCN3B-201ENST00000299333 PDLIM3Q53GG5 364 aaPredicted RBP13.93□□□□□ -0.18
SCN3B-201ENST00000299333 FRMPD2BQ6IN97 320 aa13.93□□□□□ -0.18
SCN3B-201ENST00000299333 PODNL1Q6PEZ8 512 aa13.93□□□□□ -0.18
SCN3B-201ENST00000299333 ZNF322Q6U7Q0 402 aaPredicted RBP13.93□□□□□ -0.18
SCN3B-201ENST00000299333 RDH10Q8IZV5 341 aa13.93□□□□□ -0.18
SCN3B-201ENST00000299333 OR13F1Q8NGS4 319 aa13.93□□□□□ -0.18
SCN3B-201ENST00000299333 MR1Q95460 341 aa13.93□□□□□ -0.18
SCN3B-201ENST00000299333 YIPF5Q969M3 257 aa13.93□□□□□ -0.18
SCN3B-201ENST00000299333 ARNT2Q9HBZ2 717 aa13.93□□□□□ -0.18
SCN3B-201ENST00000299333 SLIT2O94813 1529 aa13.93□□□□□ -0.18
SCN3B-201ENST00000299333 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP13.93□□□□□ -0.18
SCN3B-201ENST00000299333 LALBAP00709 142 aa13.93□□□□□ -0.18
SCN3B-201ENST00000299333 IL1RNP18510 177 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms