RNA–Protein interactions for RNA: ENST00000296861.2

TNFRSF21-201, Transcript of TNF receptor superfamily member 21, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF21, Length 3,595 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF21-201ENST00000296861 AP1M2Q9Y6Q5 423 aa12.34□□□□□ -0.43
TNFRSF21-201ENST00000296861 RCBTB2O95199 551 aa12.34□□□□□ -0.43
TNFRSF21-201ENST00000296861 PLATP00750 562 aa12.34□□□□□ -0.43
TNFRSF21-201ENST00000296861 HPXP02790 462 aa12.34□□□□□ -0.43
TNFRSF21-201ENST00000296861 WNT1P04628 370 aa12.34□□□□□ -0.43
TNFRSF21-201ENST00000296861 NPR2P20594 1047 aa12.34□□□□□ -0.43
TNFRSF21-201ENST00000296861 HSF2Q03933 536 aa12.34□□□□□ -0.43
TNFRSF21-201ENST00000296861 RTL4Q6ZR62 310 aa12.34□□□□□ -0.43
TNFRSF21-201ENST00000296861 ZNF687Q8N1G0 1237 aa12.34□□□□□ -0.43
TNFRSF21-201ENST00000296861 OR52B4Q8NGK2 314 aa12.34□□□□□ -0.43
TNFRSF21-201ENST00000296861 PEX11GQ96HA9 241 aa12.34□□□□□ -0.43
TNFRSF21-201ENST00000296861 ZBP1Q9H171 429 aa12.34□□□□□ -0.43
TNFRSF21-201ENST00000296861 PIGUQ9H490 435 aa12.34□□□□□ -0.43
TNFRSF21-201ENST00000296861 ZMAT3Q9HA38 289 aaKnown RBP12.34□□□□□ -0.43
TNFRSF21-201ENST00000296861 B3GNT2Q9NY97 397 aa12.34□□□□□ -0.43
TNFRSF21-201ENST00000296861 ING1Q9UK53 422 aaPredicted RBP12.34□□□□□ -0.43
TNFRSF21-201ENST00000296861 FBXL3Q9UKT7 428 aa12.34□□□□□ -0.43
TNFRSF21-201ENST00000296861 TRAPPC13A5PLN9 417 aa12.34□□□□□ -0.43
TNFRSF21-201ENST00000296861 STK25O00506 426 aa12.34□□□□□ -0.43
TNFRSF21-201ENST00000296861 IFNGP01579 166 aa12.34□□□□□ -0.43
TNFRSF21-201ENST00000296861 ADRB1P08588 477 aa12.34□□□□□ -0.43
TNFRSF21-201ENST00000296861 ATF1P18846 271 aa12.34□□□□□ -0.43
TNFRSF21-201ENST00000296861 AHCYP23526 432 aa12.34□□□□□ -0.43
TNFRSF21-201ENST00000296861 C21orf58P58505 322 aa12.34□□□□□ -0.43
TNFRSF21-201ENST00000296861 SNRPNP63162 240 aaKnown RBP12.34□□□□□ -0.43
TNFRSF21-201ENST00000296861 C19orf57Q0VDD7 668 aa12.34□□□□□ -0.43
TNFRSF21-201ENST00000296861 C1orf61Q13536 156 aa12.34□□□□□ -0.43
TNFRSF21-201ENST00000296861 MLF2Q15773 248 aaPredicted RBP12.34□□□□□ -0.43
TNFRSF21-201ENST00000296861 GRK1Q15835 563 aa12.34□□□□□ -0.43
TNFRSF21-201ENST00000296861 PRRT3Q5FWE3 981 aa12.34□□□□□ -0.43
TNFRSF21-201ENST00000296861 AADACL4Q5VUY2 407 aa12.34□□□□□ -0.43
TNFRSF21-201ENST00000296861 LAMTOR1Q6IAA8 161 aa12.34□□□□□ -0.43
TNFRSF21-201ENST00000296861 DIO2Q92813 273 aa12.34□□□□□ -0.43
TNFRSF21-201ENST00000296861 RERGQ96A58 199 aaPredicted RBP12.34□□□□□ -0.43
TNFRSF21-201ENST00000296861 ULBP3Q9BZM4 244 aa12.34□□□□□ -0.43
TNFRSF21-201ENST00000296861 TSPAN10Q9H1Z9 355 aaPredicted RBP12.34□□□□□ -0.43
TNFRSF21-201ENST00000296861 TCF7L1Q9HCS4 588 aa12.34□□□□□ -0.43
TNFRSF21-201ENST00000296861 UBQLN2Q9UHD9 624 aa12.34□□□□□ -0.43
TNFRSF21-201ENST00000296861 FNDC1Q4ZHG4 1894 aaPredicted RBP12.33□□□□□ -0.43
TNFRSF21-201ENST00000296861 A0A1B0GTH9 108 aa12.33□□□□□ -0.44
TNFRSF21-201ENST00000296861 OR6C74A6NCV1 312 aa12.33□□□□□ -0.44
TNFRSF21-201ENST00000296861 TRABD2BA6NFA1 517 aa12.33□□□□□ -0.44
TNFRSF21-201ENST00000296861 B3GALT2O43825 422 aa12.33□□□□□ -0.44
TNFRSF21-201ENST00000296861 SELENOFO60613 162 aa12.33□□□□□ -0.44
TNFRSF21-201ENST00000296861 CLEC3AO75596 197 aa12.33□□□□□ -0.44
TNFRSF21-201ENST00000296861 SPDEFO95238 335 aa12.33□□□□□ -0.44
TNFRSF21-201ENST00000296861 ENPP1P22413 925 aa12.33□□□□□ -0.44
TNFRSF21-201ENST00000296861 DEFA5Q01523 94 aa12.33□□□□□ -0.44
TNFRSF21-201ENST00000296861 LGALS3BPQ08380 585 aa12.33□□□□□ -0.44
TNFRSF21-201ENST00000296861 PON3Q15166 354 aa12.33□□□□□ -0.44
TNFRSF21-201ENST00000296861 ST3GAL2Q16842 350 aa12.33□□□□□ -0.44
TNFRSF21-201ENST00000296861 METRNLQ641Q3 311 aa12.33□□□□□ -0.44
TNFRSF21-201ENST00000296861 TIGD3Q6B0B8 471 aa12.33□□□□□ -0.44
TNFRSF21-201ENST00000296861 PYHIN1Q6K0P9 492 aa12.33□□□□□ -0.44
TNFRSF21-201ENST00000296861 MBOAT2Q6ZWT7 520 aa12.33□□□□□ -0.44
TNFRSF21-201ENST00000296861 BPHLQ86WA6 291 aaPredicted RBP12.33□□□□□ -0.44
TNFRSF21-201ENST00000296861 SRFBP1Q8NEF9 429 aaKnown RBP12.33□□□□□ -0.44
TNFRSF21-201ENST00000296861 OR2L3Q8NG85 312 aa12.33□□□□□ -0.44
TNFRSF21-201ENST00000296861 VOPP1Q96AW1 172 aa12.33□□□□□ -0.44
TNFRSF21-201ENST00000296861 MARVELD1Q9BSK0 173 aa12.33□□□□□ -0.44
TNFRSF21-201ENST00000296861 POT1Q9NUX5 634 aa12.33□□□□□ -0.44
TNFRSF21-201ENST00000296861 SERTM1A2A2V5 107 aa12.33□□□□□ -0.44
TNFRSF21-201ENST00000296861 CASC3O15234 703 aaKnown RBP12.33□□□□□ -0.44
TNFRSF21-201ENST00000296861 GMDSO60547 372 aa12.33□□□□□ -0.44
TNFRSF21-201ENST00000296861 LILRB5O75023 590 aa12.33□□□□□ -0.44
TNFRSF21-201ENST00000296861 NFATC1O95644 943 aa12.33□□□□□ -0.44
TNFRSF21-201ENST00000296861 APOC3P02656 99 aa12.33□□□□□ -0.44
TNFRSF21-201ENST00000296861 VASPP50552 380 aaPredicted RBP12.33□□□□□ -0.44
TNFRSF21-201ENST00000296861 C4orf46Q504U0 113 aa12.33□□□□□ -0.44
TNFRSF21-201ENST00000296861 TMEM69Q5SWH9 247 aa12.33□□□□□ -0.44
TNFRSF21-201ENST00000296861 SLC48A1Q6P1K1 146 aa12.33□□□□□ -0.44
TNFRSF21-201ENST00000296861 GID4Q8IVV7 300 aa12.33□□□□□ -0.44
TNFRSF21-201ENST00000296861 LRRC56Q8IYG6 542 aaPredicted RBP12.33□□□□□ -0.44
TNFRSF21-201ENST00000296861 THEM6Q8WUY1 208 aa12.33□□□□□ -0.44
TNFRSF21-201ENST00000296861 APOBEC4Q8WW27 367 aaKnown RBP12.33□□□□□ -0.44
TNFRSF21-201ENST00000296861 KIAA1143Q96AT1 154 aaPredicted RBP12.33□□□□□ -0.44
TNFRSF21-201ENST00000296861 CREB3L1Q96BA8 519 aa12.33□□□□□ -0.44
TNFRSF21-201ENST00000296861 C1QTNF2Q9BXJ5 285 aa12.33□□□□□ -0.44
TNFRSF21-201ENST00000296861 MTHFD2LQ9H903 347 aaPredicted RBP12.33□□□□□ -0.44
TNFRSF21-201ENST00000296861 PELI2Q9HAT8 420 aa12.33□□□□□ -0.44
TNFRSF21-201ENST00000296861 FGF20Q9NP95 211 aaPredicted RBP12.33□□□□□ -0.44
TNFRSF21-201ENST00000296861 NOX4Q9NPH5 578 aa12.33□□□□□ -0.44
TNFRSF21-201ENST00000296861 SPACA6W5XKT8 324 aa12.33□□□□□ -0.44
TNFRSF21-201ENST00000296861 IGKV1-8A0A0C4DH67 115 aa12.33□□□□□ -0.44
TNFRSF21-201ENST00000296861 LOC105371267A0A1B0GV96 52 aa12.33□□□□□ -0.44
TNFRSF21-201ENST00000296861 KHNYNO15037 678 aaKnown RBP12.33□□□□□ -0.44
TNFRSF21-201ENST00000296861 PAPLNO95428 1278 aa12.33□□□□□ -0.44
TNFRSF21-201ENST00000296861 CFDP00746 253 aaPredicted RBP12.33□□□□□ -0.44
TNFRSF21-201ENST00000296861 OR8G3PP0DMU2 310 aa12.33□□□□□ -0.44
TNFRSF21-201ENST00000296861 F3P13726 295 aa12.33□□□□□ -0.44
TNFRSF21-201ENST00000296861 ITPKBP27987 946 aa12.33□□□□□ -0.44
TNFRSF21-201ENST00000296861 LIMK1P53667 647 aa12.33□□□□□ -0.44
TNFRSF21-201ENST00000296861 TEX261Q6UWH6 196 aa12.33□□□□□ -0.44
TNFRSF21-201ENST00000296861 NDUFAF7Q7L592 441 aa12.33□□□□□ -0.44
TNFRSF21-201ENST00000296861 SMARCD2Q92925 531 aa12.33□□□□□ -0.44
TNFRSF21-201ENST00000296861 RSPRY1Q96DX4 576 aa12.33□□□□□ -0.44
TNFRSF21-201ENST00000296861 KXD1Q9BQD3 176 aa12.33□□□□□ -0.44
TNFRSF21-201ENST00000296861 SLC6A20Q9NP91 592 aa12.33□□□□□ -0.44
TNFRSF21-201ENST00000296861 GPR34Q9UPC5 381 aa12.33□□□□□ -0.44
TNFRSF21-201ENST00000296861 SLC27A6Q9Y2P4 619 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms