RNA–Protein interactions for RNA: ENST00000296449.9

CCDC36-201, Transcript of coiled-coil domain containing 36, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC36, Length 2,613 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC36-201ENST00000296449 CCR9P51686 369 aa9.42□□□□□ -0.9
CCDC36-201ENST00000296449 GBX2P52951 348 aaPredicted RBP9.42□□□□□ -0.9
CCDC36-201ENST00000296449 ACTC1P68032 377 aa9.42□□□□□ -0.9
CCDC36-201ENST00000296449 ACTA1P68133 377 aa9.42□□□□□ -0.9
CCDC36-201ENST00000296449 NTHL1P78549 312 aa9.42□□□□□ -0.9
CCDC36-201ENST00000296449 ELAVL3Q14576 367 aaKnown RBP9.42□□□□□ -0.9
CCDC36-201ENST00000296449 GPR68Q15743 365 aa9.42□□□□□ -0.9
CCDC36-201ENST00000296449 TCTE1Q5JU00 501 aa9.42□□□□□ -0.9
CCDC36-201ENST00000296449 FAM71CQ8NEG0 241 aa9.42□□□□□ -0.9
CCDC36-201ENST00000296449 SLC2A12Q8TD20 617 aa9.42□□□□□ -0.9
CCDC36-201ENST00000296449 WFIKKN2Q8TEU8 576 aa9.42□□□□□ -0.9
CCDC36-201ENST00000296449 LRRC3BQ96PB8 259 aa9.42□□□□□ -0.9
CCDC36-201ENST00000296449 MS4A4EQ96PG1 132 aa9.42□□□□□ -0.9
CCDC36-201ENST00000296449 WDR26Q9H7D7 661 aa9.42□□□□□ -0.9
CCDC36-201ENST00000296449 NANSQ9NR45 359 aa9.42□□□□□ -0.9
CCDC36-201ENST00000296449 MED9Q9NWA0 146 aa9.42□□□□□ -0.9
CCDC36-201ENST00000296449 HAO2Q9NYQ3 351 aa9.42□□□□□ -0.9
CCDC36-201ENST00000296449 RCE1Q9Y256 329 aa9.42□□□□□ -0.9
CCDC36-201ENST00000296449 AK6Q9Y3D8 172 aaKnown RBP9.42□□□□□ -0.9
CCDC36-201ENST00000296449 PCDHGA9Q9Y5G4 932 aaKnown RBP9.42□□□□□ -0.9
CCDC36-201ENST00000296449 A0A1B0GTQ1 180 aa9.42□□□□□ -0.9
CCDC36-201ENST00000296449 RIIAD1A6NNX1 92 aa9.42□□□□□ -0.9
CCDC36-201ENST00000296449 LATO43561 262 aa9.42□□□□□ -0.9
CCDC36-201ENST00000296449 AGR2O95994 175 aa9.42□□□□□ -0.9
CCDC36-201ENST00000296449 HOXD4P09016 255 aaPredicted RBP9.42□□□□□ -0.9
CCDC36-201ENST00000296449 ACSM4P0C7M7 580 aa9.42□□□□□ -0.9
CCDC36-201ENST00000296449 ADH5P11766 374 aa9.42□□□□□ -0.9
CCDC36-201ENST00000296449 PSMB1P20618 241 aaKnown RBP9.42□□□□□ -0.9
CCDC36-201ENST00000296449 ZP3P21754 424 aa9.42□□□□□ -0.9
CCDC36-201ENST00000296449 NDUFS1P28331 727 aa9.42□□□□□ -0.9
CCDC36-201ENST00000296449 PPM1AP35813 382 aa9.42□□□□□ -0.9
CCDC36-201ENST00000296449 HCCSP53701 268 aa9.42□□□□□ -0.9
CCDC36-201ENST00000296449 DUSP8Q13202 625 aa9.42□□□□□ -0.9
CCDC36-201ENST00000296449 OPCMLQ14982 345 aa9.42□□□□□ -0.9
CCDC36-201ENST00000296449 OR1Q1Q15612 314 aa9.42□□□□□ -0.9
CCDC36-201ENST00000296449 DUSP5Q16690 384 aa9.42□□□□□ -0.9
CCDC36-201ENST00000296449 ARHGAP11BQ3KRB8 267 aa9.42□□□□□ -0.9
CCDC36-201ENST00000296449 TP53I3Q53FA7 332 aa9.42□□□□□ -0.9
CCDC36-201ENST00000296449 EIPR1Q53HC9 387 aa9.42□□□□□ -0.9
CCDC36-201ENST00000296449 NHLRC3Q5JS37 347 aa9.42□□□□□ -0.9
CCDC36-201ENST00000296449 NRROSQ86YC3 692 aa9.42□□□□□ -0.9
CCDC36-201ENST00000296449 CMTM4Q8IZR5 234 aa9.42□□□□□ -0.9
CCDC36-201ENST00000296449 HDDC3Q8N4P3 179 aa9.42□□□□□ -0.9
CCDC36-201ENST00000296449 GCDHQ92947 438 aaPredicted RBP9.42□□□□□ -0.9
CCDC36-201ENST00000296449 BPIFA2Q96DR5 249 aa9.42□□□□□ -0.9
CCDC36-201ENST00000296449 C10orf90Q96M02 699 aa9.42□□□□□ -0.9
CCDC36-201ENST00000296449 ZNF578Q96N58 590 aaPredicted RBP9.42□□□□□ -0.9
CCDC36-201ENST00000296449 AIFM2Q9BRQ8 373 aa9.42□□□□□ -0.9
CCDC36-201ENST00000296449 C1QTNF6Q9BXI9 259 aa9.42□□□□□ -0.9
CCDC36-201ENST00000296449 CHIAQ9BZP6 476 aa9.42□□□□□ -0.9
CCDC36-201ENST00000296449 CACYBPQ9HB71 228 aaKnown RBP9.42□□□□□ -0.9
CCDC36-201ENST00000296449 HRASLSQ9HDD0 168 aa9.42□□□□□ -0.9
CCDC36-201ENST00000296449 NPDC1Q9NQX5 325 aaPredicted RBP9.42□□□□□ -0.9
CCDC36-201ENST00000296449 AKAP7Q9P0M2 348 aaPredicted RBP9.42□□□□□ -0.9
CCDC36-201ENST00000296449 NTMQ9P121 344 aa9.42□□□□□ -0.9
CCDC36-201ENST00000296449 HCN3Q9P1Z3 774 aa9.42□□□□□ -0.9
CCDC36-201ENST00000296449 SNRNP200O75643 2136 aaKnown RBP9.42□□□□□ -0.9
CCDC36-201ENST00000296449 TRAV27A0A087WT01 109 aa9.41□□□□□ -0.9
CCDC36-201ENST00000296449 TBC1D3KA0A087X1G2 549 aa9.41□□□□□ -0.9
CCDC36-201ENST00000296449 EDDM13A0A1B0GTR0 161 aa9.41□□□□□ -0.9
CCDC36-201ENST00000296449 A0A1B0GUH1 482 aa9.41□□□□□ -0.9
CCDC36-201ENST00000296449 hCG_1807616A0A1W2PRN6 198 aa9.41□□□□□ -0.9
CCDC36-201ENST00000296449 TBC1D3BA6NDS4 549 aa9.41□□□□□ -0.9
CCDC36-201ENST00000296449 TBC1D3FA6NER0 549 aaPredicted RBP9.41□□□□□ -0.9
CCDC36-201ENST00000296449 NAP1L6A6NFF2 107 aa9.41□□□□□ -0.9
CCDC36-201ENST00000296449 OGG1O15527 345 aa9.41□□□□□ -0.9
CCDC36-201ENST00000296449 RNGTTO60942 597 aaKnown RBP9.41□□□□□ -0.9
CCDC36-201ENST00000296449 ARL6IP5O75915 188 aa9.41□□□□□ -0.9
CCDC36-201ENST00000296449 TFP02787 698 aa9.41□□□□□ -0.9
CCDC36-201ENST00000296449 CLTBP09497 229 aa9.41□□□□□ -0.9
CCDC36-201ENST00000296449 UCHL1P09936 223 aa9.41□□□□□ -0.9
CCDC36-201ENST00000296449 ATF4P18848 351 aaPredicted RBP9.41□□□□□ -0.9
CCDC36-201ENST00000296449 P2RY2P41231 377 aa9.41□□□□□ -0.9
CCDC36-201ENST00000296449 TSFMP43897 325 aaKnown RBP9.41□□□□□ -0.9
CCDC36-201ENST00000296449 GDI2P50395 445 aaKnown RBP9.41□□□□□ -0.9
CCDC36-201ENST00000296449 MAP2K6P52564 334 aa9.41□□□□□ -0.9
CCDC36-201ENST00000296449 RPS11P62280 158 aaKnown RBP eCLIP9.41□□□□□ -0.9
CCDC36-201ENST00000296449 CAMK1Q14012 370 aa9.41□□□□□ -0.9
CCDC36-201ENST00000296449 UBE2NLQ5JXB2 153 aa9.41□□□□□ -0.9
CCDC36-201ENST00000296449 ELFN2Q5R3F8 820 aa9.41□□□□□ -0.9
CCDC36-201ENST00000296449 METTL11BQ5VVY1 283 aa9.41□□□□□ -0.9
CCDC36-201ENST00000296449 TBC1D3GQ6DHY5 549 aa9.41□□□□□ -0.9
CCDC36-201ENST00000296449 KIAA1324Q6UXG2 1013 aaKnown RBP9.41□□□□□ -0.9
CCDC36-201ENST00000296449 TMPRSS11FQ6ZWK6 438 aa9.41□□□□□ -0.9
CCDC36-201ENST00000296449 ANKRD33Q7Z3H0 272 aa9.41□□□□□ -0.9
CCDC36-201ENST00000296449 SPICQ8N5J4 248 aa9.41□□□□□ -0.9
CCDC36-201ENST00000296449 OR2L8Q8NGY9 312 aa9.41□□□□□ -0.9
CCDC36-201ENST00000296449 ZNF671Q8TAW3 534 aa9.41□□□□□ -0.9
CCDC36-201ENST00000296449 PIGKQ92643 395 aa9.41□□□□□ -0.9
CCDC36-201ENST00000296449 COL26A1Q96A83 441 aa9.41□□□□□ -0.9
CCDC36-201ENST00000296449 SFXN2Q96NB2 322 aa9.41□□□□□ -0.9
CCDC36-201ENST00000296449 DERL3Q96Q80 235 aa9.41□□□□□ -0.9
CCDC36-201ENST00000296449 SDF2Q99470 211 aa9.41□□□□□ -0.9
CCDC36-201ENST00000296449 REG4Q9BYZ8 158 aa9.41□□□□□ -0.9
CCDC36-201ENST00000296449 SLC7A5P2Q9GIP4 190 aa9.41□□□□□ -0.9
CCDC36-201ENST00000296449 OR10A4Q9H209 315 aa9.41□□□□□ -0.9
CCDC36-201ENST00000296449 PIPOXQ9P0Z9 390 aa9.41□□□□□ -0.9
CCDC36-201ENST00000296449 ACSL5Q9ULC5 683 aa9.41□□□□□ -0.9
CCDC36-201ENST00000296449 KCNMB2Q9Y691 235 aa9.41□□□□□ -0.9
CCDC36-201ENST00000296449 PRICKLE3O43900 615 aaPredicted RBP9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms