RNA–Protein interactions for RNA: ENST00000296051.6

HPS3-201, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HPS3, Length 4,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-201ENST00000296051 P2RY14Q15391 338 aa12.54□□□□□ -0.4
HPS3-201ENST00000296051 ACSM5Q6NUN0 579 aa12.54□□□□□ -0.4
HPS3-201ENST00000296051 KCNN1Q92952 543 aa12.54□□□□□ -0.4
HPS3-201ENST00000296051 WBP2Q969T9 261 aa12.54□□□□□ -0.4
HPS3-201ENST00000296051 ZNF582Q96NG8 517 aaPredicted RBP12.54□□□□□ -0.4
HPS3-201ENST00000296051 POLDIP3Q9BY77 421 aaKnown RBP12.54□□□□□ -0.4
HPS3-201ENST00000296051 ACTR6Q9GZN1 396 aa12.54□□□□□ -0.4
HPS3-201ENST00000296051 P2RY12Q9H244 342 aa12.54□□□□□ -0.4
HPS3-201ENST00000296051 C6orf106Q9H6K1 298 aaPredicted RBP12.54□□□□□ -0.4
HPS3-201ENST00000296051 METTL8Q9H825 291 aaKnown RBP12.54□□□□□ -0.4
HPS3-201ENST00000296051 FGF21Q9NSA1 209 aa12.54□□□□□ -0.4
HPS3-201ENST00000296051 A3GALT2U3KPV4 340 aa12.54□□□□□ -0.4
HPS3-201ENST00000296051 PCM1Q15154 2024 aa12.54□□□□□ -0.4
HPS3-201ENST00000296051 ARFGEF1Q9Y6D6 1849 aa12.54□□□□□ -0.4
HPS3-201ENST00000296051 TRAV18A0A075B6X5 111 aa12.53□□□□□ -0.4
HPS3-201ENST00000296051 C17orf105B2RV13 164 aa12.53□□□□□ -0.4
HPS3-201ENST00000296051 SCRG1O75711 98 aa12.53□□□□□ -0.4
HPS3-201ENST00000296051 PEX11BO96011 259 aa12.53□□□□□ -0.4
HPS3-201ENST00000296051 ELAVL4P26378 380 aaKnown RBP12.53□□□□□ -0.4
HPS3-201ENST00000296051 CHRNEQ04844 493 aa12.53□□□□□ -0.4
HPS3-201ENST00000296051 L3MBTL4Q8NA19 623 aa12.53□□□□□ -0.4
HPS3-201ENST00000296051 SDR9C7Q8NEX9 313 aa12.53□□□□□ -0.4
HPS3-201ENST00000296051 BCL7CQ8WUZ0 217 aaPredicted RBP12.53□□□□□ -0.4
HPS3-201ENST00000296051 MAP6Q96JE9 813 aa12.53□□□□□ -0.4
HPS3-201ENST00000296051 KATNBL1Q9H079 304 aa12.53□□□□□ -0.4
HPS3-201ENST00000296051 BABAM2Q9NXR7 383 aa12.53□□□□□ -0.4
HPS3-201ENST00000296051 LAMP5Q9UJQ1 280 aa12.53□□□□□ -0.4
HPS3-201ENST00000296051 CACNA1IQ9P0X4 2223 aa12.53□□□□□ -0.4
HPS3-201ENST00000296051 TRAV27A0A087WT01 109 aa12.53□□□□□ -0.4
HPS3-201ENST00000296051 VSTM2BA6NLU5 285 aa12.53□□□□□ -0.4
HPS3-201ENST00000296051 M0R036 132 aa12.53□□□□□ -0.4
HPS3-201ENST00000296051 SIGLEC6O43699 453 aa12.53□□□□□ -0.4
HPS3-201ENST00000296051 PCMT1P22061 227 aa12.53□□□□□ -0.4
HPS3-201ENST00000296051 PFN3P60673 137 aa12.53□□□□□ -0.4
HPS3-201ENST00000296051 ECH1Q13011 328 aa12.53□□□□□ -0.4
HPS3-201ENST00000296051 ILKQ13418 452 aa12.53□□□□□ -0.4
HPS3-201ENST00000296051 NKPD1Q17RQ9 610 aa12.53□□□□□ -0.4
HPS3-201ENST00000296051 COL28A1Q2UY09 1125 aa12.53□□□□□ -0.4
HPS3-201ENST00000296051 MED30Q96HR3 178 aa12.53□□□□□ -0.4
HPS3-201ENST00000296051 IGLV3-10A0A075B6K4 115 aa12.53□□□□□ -0.4
HPS3-201ENST00000296051 GOSR2O14653 212 aa12.53□□□□□ -0.4
HPS3-201ENST00000296051 PRICKLE3O43900 615 aaPredicted RBP12.53□□□□□ -0.4
HPS3-201ENST00000296051 FZD7O75084 574 aa12.53□□□□□ -0.4
HPS3-201ENST00000296051 IGLV3-25P01717 112 aa12.53□□□□□ -0.4
HPS3-201ENST00000296051 ZNF888P0CJ79 500 aaPredicted RBP12.53□□□□□ -0.4
HPS3-201ENST00000296051 OR3A2P47893 321 aa12.53□□□□□ -0.4
HPS3-201ENST00000296051 ZNF33BQ06732 778 aa12.53□□□□□ -0.4
HPS3-201ENST00000296051 C18orf63Q68DL7 685 aa12.53□□□□□ -0.4
HPS3-201ENST00000296051 ESPNLQ6ZVH7 1005 aa12.53□□□□□ -0.4
HPS3-201ENST00000296051 MS4A15Q8N5U1 240 aa12.53□□□□□ -0.4
HPS3-201ENST00000296051 OR6F1Q8NGZ6 308 aa12.53□□□□□ -0.4
HPS3-201ENST00000296051 TMEM163Q8TC26 289 aa12.53□□□□□ -0.4
HPS3-201ENST00000296051 CREB3L4Q8TEY5 395 aa12.53□□□□□ -0.4
HPS3-201ENST00000296051 OPALINQ96PE5 141 aa12.53□□□□□ -0.4
HPS3-201ENST00000296051 SLC6A7Q99884 636 aa12.53□□□□□ -0.4
HPS3-201ENST00000296051 ZNF350Q9GZX5 532 aa12.53□□□□□ -0.4
HPS3-201ENST00000296051 ASB6Q9NWX5 421 aa12.53□□□□□ -0.4
HPS3-201ENST00000296051 COPZ2Q9P299 210 aa12.53□□□□□ -0.4
HPS3-201ENST00000296051 VDAC3Q9Y277 283 aa12.53□□□□□ -0.4
HPS3-201ENST00000296051 A6NLC8 198 aa12.53□□□□□ -0.4
HPS3-201ENST00000296051 H0Y8X5 98 aa12.53□□□□□ -0.4
HPS3-201ENST00000296051 H3BML4 177 aa12.53□□□□□ -0.4
HPS3-201ENST00000296051 UGDHO60701 494 aa12.53□□□□□ -0.4
HPS3-201ENST00000296051 LDB3O75112 727 aa12.53□□□□□ -0.4
HPS3-201ENST00000296051 ETHE1O95571 254 aa12.53□□□□□ -0.4
HPS3-201ENST00000296051 F10P00742 488 aa12.53□□□□□ -0.4
HPS3-201ENST00000296051 PGCP20142 388 aa12.53□□□□□ -0.4
HPS3-201ENST00000296051 MMP11P24347 488 aa12.53□□□□□ -0.4
HPS3-201ENST00000296051 CD27P26842 260 aa12.53□□□□□ -0.4
HPS3-201ENST00000296051 SQSTM1Q13501 440 aa12.53□□□□□ -0.4
HPS3-201ENST00000296051 ZNF750Q32MQ0 723 aa12.53□□□□□ -0.4
HPS3-201ENST00000296051 ZNF385BQ569K4 471 aa12.53□□□□□ -0.4
HPS3-201ENST00000296051 SLC22A10Q63ZE4 541 aa12.53□□□□□ -0.4
HPS3-201ENST00000296051 ZNF227Q86WZ6 799 aa12.53□□□□□ -0.4
HPS3-201ENST00000296051 OR2L3Q8NG85 312 aa12.53□□□□□ -0.4
HPS3-201ENST00000296051 MMP17Q9ULZ9 603 aa12.53□□□□□ -0.4
HPS3-201ENST00000296051 EDARQ9UNE0 448 aa12.53□□□□□ -0.4
HPS3-201ENST00000296051 AP1M2Q9Y6Q5 423 aa12.53□□□□□ -0.4
HPS3-201ENST00000296051 A0A1B0GV50 99 aa12.52□□□□□ -0.4
HPS3-201ENST00000296051 RLN2P04090 185 aa12.52□□□□□ -0.4
HPS3-201ENST00000296051 PRR35P0CG20 571 aa12.52□□□□□ -0.4
HPS3-201ENST00000296051 KIR2DL3P43628 341 aa12.52□□□□□ -0.4
HPS3-201ENST00000296051 PCGF3Q3KNV8 242 aa12.52□□□□□ -0.4
HPS3-201ENST00000296051 UBALD2Q8IYN6 164 aa12.52□□□□□ -0.4
HPS3-201ENST00000296051 OR4M1Q8NGD0 313 aa12.52□□□□□ -0.4
HPS3-201ENST00000296051 ZNF566Q969W8 418 aa12.52□□□□□ -0.4
HPS3-201ENST00000296051 OR52D1Q9H346 318 aa12.52□□□□□ -0.4
HPS3-201ENST00000296051 FKBP14Q9NWM8 211 aa12.52□□□□□ -0.4
HPS3-201ENST00000296051 SLC6A14Q9UN76 642 aa12.52□□□□□ -0.4
HPS3-201ENST00000296051 NBASA2RRP1 2371 aa12.52□□□□□ -0.4
HPS3-201ENST00000296051 FER1L6Q2WGJ9 1857 aa12.52□□□□□ -0.4
HPS3-201ENST00000296051 CSTBP04080 98 aaKnown RBP12.52□□□□□ -0.41
HPS3-201ENST00000296051 FURINP09958 794 aa12.52□□□□□ -0.41
HPS3-201ENST00000296051 DRD2P14416 443 aa12.52□□□□□ -0.41
HPS3-201ENST00000296051 GRK5P34947 590 aa12.52□□□□□ -0.41
HPS3-201ENST00000296051 CLRN1P58418 232 aa12.52□□□□□ -0.41
HPS3-201ENST00000296051 GPLD1P80108 840 aa12.52□□□□□ -0.41
HPS3-201ENST00000296051 SERTAD2Q14140 314 aa12.52□□□□□ -0.41
HPS3-201ENST00000296051 MANEAQ5SRI9 462 aa12.52□□□□□ -0.41
HPS3-201ENST00000296051 STX12Q86Y82 276 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms