RNA–Protein interactions for RNA: ENST00000293748.9

SYNGAP1-201, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 4,556 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-201ENST00000293748 ZNF91Q05481 1191 aa11.07□□□□□ -0.64
SYNGAP1-201ENST00000293748 TBC1D25Q3MII6 688 aa11.07□□□□□ -0.64
SYNGAP1-201ENST00000293748 MAMDC2Q7Z304 686 aaPredicted RBP11.07□□□□□ -0.64
SYNGAP1-201ENST00000293748 CCDC71LQ8N9Z2 235 aa11.07□□□□□ -0.64
SYNGAP1-201ENST00000293748 GATSQ8NAP1 163 aa11.07□□□□□ -0.64
SYNGAP1-201ENST00000293748 KLHL15Q96M94 604 aa11.07□□□□□ -0.64
SYNGAP1-201ENST00000293748 TREX1Q9NSU2 369 aa11.07□□□□□ -0.64
SYNGAP1-201ENST00000293748 HRASLS2Q9NWW9 162 aa11.07□□□□□ -0.64
SYNGAP1-201ENST00000293748 OR6C2Q9NZP2 312 aa11.07□□□□□ -0.64
SYNGAP1-201ENST00000293748 A0A0A6YYH2 397 aa11.06□□□□□ -0.64
SYNGAP1-201ENST00000293748 A6NJ64 397 aa11.06□□□□□ -0.64
SYNGAP1-201ENST00000293748 SLC16A8O95907 504 aa11.06□□□□□ -0.64
SYNGAP1-201ENST00000293748 HRGP04196 525 aa11.06□□□□□ -0.64
SYNGAP1-201ENST00000293748 JUNBP17275 347 aaPredicted RBP11.06□□□□□ -0.64
SYNGAP1-201ENST00000293748 PRPS1P60891 318 aa11.06□□□□□ -0.64
SYNGAP1-201ENST00000293748 IRF4Q15306 451 aa11.06□□□□□ -0.64
SYNGAP1-201ENST00000293748 STEAP3Q658P3 488 aa11.06□□□□□ -0.64
SYNGAP1-201ENST00000293748 C1orf94Q6P1W5 598 aa11.06□□□□□ -0.64
SYNGAP1-201ENST00000293748 SMAP2Q8WU79 429 aaPredicted RBP11.06□□□□□ -0.64
SYNGAP1-201ENST00000293748 RPL3LQ92901 407 aaKnown RBP11.06□□□□□ -0.64
SYNGAP1-201ENST00000293748 FCRL1Q96LA6 429 aa11.06□□□□□ -0.64
SYNGAP1-201ENST00000293748 PELI2Q9HAT8 420 aa11.06□□□□□ -0.64
SYNGAP1-201ENST00000293748 BABAM2Q9NXR7 383 aa11.06□□□□□ -0.64
SYNGAP1-201ENST00000293748 LRFN1Q9P244 771 aa11.06□□□□□ -0.64
SYNGAP1-201ENST00000293748 SERTAD3Q9UJW9 196 aa11.06□□□□□ -0.64
SYNGAP1-201ENST00000293748 PLRG1O43660 514 aaKnown RBP11.06□□□□□ -0.64
SYNGAP1-201ENST00000293748 ARL3P36405 182 aa11.06□□□□□ -0.64
SYNGAP1-201ENST00000293748 MESP2Q0VG99 397 aa11.06□□□□□ -0.64
SYNGAP1-201ENST00000293748 PEA15Q15121 130 aa11.06□□□□□ -0.64
SYNGAP1-201ENST00000293748 FAM205BPQ63HN1 556 aa11.06□□□□□ -0.64
SYNGAP1-201ENST00000293748 RASGRP3Q8IV61 690 aa11.06□□□□□ -0.64
SYNGAP1-201ENST00000293748 SLC35F2Q8IXU6 374 aa11.06□□□□□ -0.64
SYNGAP1-201ENST00000293748 CLDN22Q8N7P3 220 aa11.06□□□□□ -0.64
SYNGAP1-201ENST00000293748 ADAMTS16Q8TE57 1224 aa11.06□□□□□ -0.64
SYNGAP1-201ENST00000293748 TXNDC15Q96J42 360 aa11.06□□□□□ -0.64
SYNGAP1-201ENST00000293748 PTCHD1Q96NR3 888 aa11.06□□□□□ -0.64
SYNGAP1-201ENST00000293748 LMF1Q96S06 567 aa11.06□□□□□ -0.64
SYNGAP1-201ENST00000293748 ATOH8Q96SQ7 321 aa11.06□□□□□ -0.64
SYNGAP1-201ENST00000293748 CLMPQ9H6B4 373 aa11.06□□□□□ -0.64
SYNGAP1-201ENST00000293748 NOX3Q9HBY0 568 aa11.06□□□□□ -0.64
SYNGAP1-201ENST00000293748 MAN2C1Q9NTJ4 1040 aa11.06□□□□□ -0.64
SYNGAP1-201ENST00000293748 CNIH4Q9P003 139 aa11.06□□□□□ -0.64
SYNGAP1-201ENST00000293748 CSNK1G3Q9Y6M4 447 aa11.06□□□□□ -0.64
SYNGAP1-201ENST00000293748 GAPDHSO14556 408 aaPredicted RBP11.06□□□□□ -0.64
SYNGAP1-201ENST00000293748 RAB40ALP0C0E4 278 aa11.06□□□□□ -0.64
SYNGAP1-201ENST00000293748 IL4RP24394 825 aa11.06□□□□□ -0.64
SYNGAP1-201ENST00000293748 RBMS1P29558 406 aaKnown RBP11.06□□□□□ -0.64
SYNGAP1-201ENST00000293748 CTXN1P60606 82 aa11.06□□□□□ -0.64
SYNGAP1-201ENST00000293748 BTN1A1Q13410 526 aa11.06□□□□□ -0.64
SYNGAP1-201ENST00000293748 SGCAQ16586 387 aa11.06□□□□□ -0.64
SYNGAP1-201ENST00000293748 NHSL2Q5HYW2 709 aa11.06□□□□□ -0.64
SYNGAP1-201ENST00000293748 NDUFAF5Q5TEU4 345 aa11.06□□□□□ -0.64
SYNGAP1-201ENST00000293748 ZNF585AQ6P3V2 769 aa11.06□□□□□ -0.64
SYNGAP1-201ENST00000293748 FIGNL1Q6PIW4 674 aa11.06□□□□□ -0.64
SYNGAP1-201ENST00000293748 TMPRSS9Q7Z410 1059 aa11.06□□□□□ -0.64
SYNGAP1-201ENST00000293748 RAB40AQ8WXH6 277 aa11.06□□□□□ -0.64
SYNGAP1-201ENST00000293748 ACOT11Q8WXI4 607 aaPredicted RBP11.06□□□□□ -0.64
SYNGAP1-201ENST00000293748 SAP130Q9H0E3 1048 aa11.06□□□□□ -0.64
SYNGAP1-201ENST00000293748 ACTR10Q9NZ32 417 aa11.06□□□□□ -0.64
SYNGAP1-201ENST00000293748 SPO11Q9Y5K1 396 aa11.06□□□□□ -0.64
SYNGAP1-201ENST00000293748 TSTD3H0UI37 97 aa11.06□□□□□ -0.64
SYNGAP1-201ENST00000293748 ATG12O94817 140 aa11.06□□□□□ -0.64
SYNGAP1-201ENST00000293748 ZNF674Q2M3X9 581 aa11.06□□□□□ -0.64
SYNGAP1-201ENST00000293748 ZNF704Q6ZNC4 412 aaPredicted RBP11.06□□□□□ -0.64
SYNGAP1-201ENST00000293748 DPPA4Q7L190 304 aa11.06□□□□□ -0.64
SYNGAP1-201ENST00000293748 KLHDC8AQ8IYD2 350 aa11.06□□□□□ -0.64
SYNGAP1-201ENST00000293748 SFXN5Q8TD22 340 aa11.06□□□□□ -0.64
SYNGAP1-201ENST00000293748 MMABQ96EY8 250 aaPredicted RBP11.06□□□□□ -0.64
SYNGAP1-201ENST00000293748 RRNAD1Q96FB5 475 aaKnown RBP11.06□□□□□ -0.64
SYNGAP1-201ENST00000293748 MED30Q96HR3 178 aa11.06□□□□□ -0.64
SYNGAP1-201ENST00000293748 BOCQ9BWV1 1114 aa11.06□□□□□ -0.64
SYNGAP1-201ENST00000293748 HOXD1Q9GZZ0 328 aa11.06□□□□□ -0.64
SYNGAP1-201ENST00000293748 C6orf106Q9H6K1 298 aaPredicted RBP11.06□□□□□ -0.64
SYNGAP1-201ENST00000293748 TMEM9BQ9NQ34 198 aa11.06□□□□□ -0.64
SYNGAP1-201ENST00000293748 ZNF175Q9Y473 711 aa11.06□□□□□ -0.64
SYNGAP1-201ENST00000293748 HS3ST3A1Q9Y663 406 aa11.06□□□□□ -0.64
SYNGAP1-201ENST00000293748 OR5K4A6NMS3 321 aa11.05□□□□□ -0.64
SYNGAP1-201ENST00000293748 SEC14L2O76054 403 aa11.05□□□□□ -0.64
SYNGAP1-201ENST00000293748 PPP1R3DO95685 299 aa11.05□□□□□ -0.64
SYNGAP1-201ENST00000293748 RPS2P15880 293 aaKnown RBP11.05□□□□□ -0.64
SYNGAP1-201ENST00000293748 PRDX3P30048 256 aaKnown RBP11.05□□□□□ -0.64
SYNGAP1-201ENST00000293748 RAB28P51157 221 aa11.05□□□□□ -0.64
SYNGAP1-201ENST00000293748 RRAS2P62070 204 aaPredicted RBP11.05□□□□□ -0.64
SYNGAP1-201ENST00000293748 CSNK2A1P68400 391 aaPredicted RBP11.05□□□□□ -0.64
SYNGAP1-201ENST00000293748 DYRK1AQ13627 763 aa11.05□□□□□ -0.64
SYNGAP1-201ENST00000293748 PTPRRQ15256 657 aa11.05□□□□□ -0.64
SYNGAP1-201ENST00000293748 TP53I3Q53FA7 332 aa11.05□□□□□ -0.64
SYNGAP1-201ENST00000293748 ESCO2Q56NI9 601 aa11.05□□□□□ -0.64
SYNGAP1-201ENST00000293748 SGPP2Q8IWX5 399 aa11.05□□□□□ -0.64
SYNGAP1-201ENST00000293748 OR6V1Q8N148 313 aa11.05□□□□□ -0.64
SYNGAP1-201ENST00000293748 CSNK2A3Q8NEV1 391 aa11.05□□□□□ -0.64
SYNGAP1-201ENST00000293748 POC1BQ8TC44 478 aa11.05□□□□□ -0.64
SYNGAP1-201ENST00000293748 ADAMTS18Q8TE60 1221 aa11.05□□□□□ -0.64
SYNGAP1-201ENST00000293748 DAZLQ92904 295 aaKnown RBP11.05□□□□□ -0.64
SYNGAP1-201ENST00000293748 PDFQ9HBH1 243 aa11.05□□□□□ -0.64
SYNGAP1-201ENST00000293748 ICKQ9UPZ9 632 aa11.05□□□□□ -0.64
SYNGAP1-201ENST00000293748 ZBTB32Q9Y2Y4 487 aaPredicted RBP11.05□□□□□ -0.64
SYNGAP1-201ENST00000293748 NOTCH4Q99466 2003 aa11.05□□□□□ -0.64
SYNGAP1-201ENST00000293748 ANTXRLA6NF34 631 aa11.05□□□□□ -0.64
SYNGAP1-201ENST00000293748 P2RX6O15547 441 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms