RNA–Protein interactions for RNA: ENST00000291552.8

U2AF1-201, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene U2AF1, Length 962 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-201ENST00000291552 WDR45Q9Y484 360 aa22.37■■□□□ 1.17
U2AF1-201ENST00000291552 CLDN24A6NM45 220 aa22.36■■□□□ 1.17
U2AF1-201ENST00000291552 E9PBE3 544 aa22.36■■□□□ 1.17
U2AF1-201ENST00000291552 SDHDO14521 159 aa22.36■■□□□ 1.17
U2AF1-201ENST00000291552 FESP07332 822 aa22.36■■□□□ 1.17
U2AF1-201ENST00000291552 PGCP20142 388 aa22.36■■□□□ 1.17
U2AF1-201ENST00000291552 IL32P24001 234 aa22.36■■□□□ 1.17
U2AF1-201ENST00000291552 IL12AP29459 219 aa22.36■■□□□ 1.17
U2AF1-201ENST00000291552 KHKP50053 298 aa22.36■■□□□ 1.17
U2AF1-201ENST00000291552 NME5P56597 212 aa22.36■■□□□ 1.17
U2AF1-201ENST00000291552 RASGEF1BQ0VAM2 473 aa22.36■■□□□ 1.17
U2AF1-201ENST00000291552 STX3Q13277 289 aa22.36■■□□□ 1.17
U2AF1-201ENST00000291552 SYT14P1Q58G82 188 aa22.36■■□□□ 1.17
U2AF1-201ENST00000291552 ABLIM2Q6H8Q1 611 aa22.36■■□□□ 1.17
U2AF1-201ENST00000291552 ZNF775Q96BV0 537 aaPredicted RBP22.36■■□□□ 1.17
U2AF1-201ENST00000291552 CCDC115Q96NT0 180 aa22.36■■□□□ 1.17
U2AF1-201ENST00000291552 SLC35A5Q9BS91 424 aa22.36■■□□□ 1.17
U2AF1-201ENST00000291552 TACO1Q9BSH4 297 aaKnown RBP22.36■■□□□ 1.17
U2AF1-201ENST00000291552 CCDC106Q9BWC9 280 aa22.36■■□□□ 1.17
U2AF1-201ENST00000291552 CENPHQ9H3R5 247 aa22.36■■□□□ 1.17
U2AF1-201ENST00000291552 POLE3Q9NRF9 147 aa22.36■■□□□ 1.17
U2AF1-201ENST00000291552 AIG1Q9NVV5 245 aa22.36■■□□□ 1.17
U2AF1-201ENST00000291552 HIVEP2P31629 2446 aa22.36■■□□□ 1.17
U2AF1-201ENST00000291552 AGR2O95994 175 aa22.35■■□□□ 1.17
U2AF1-201ENST00000291552 DIO1P49895 249 aa22.35■■□□□ 1.17
U2AF1-201ENST00000291552 CLNS1AP54105 237 aaKnown RBP22.35■■□□□ 1.17
U2AF1-201ENST00000291552 UFM1P61960 85 aa22.35■■□□□ 1.17
U2AF1-201ENST00000291552 P2RY6Q15077 328 aa22.35■■□□□ 1.17
U2AF1-201ENST00000291552 DPY19L1Q2PZI1 675 aa22.35■■□□□ 1.17
U2AF1-201ENST00000291552 NCMAPQ5T1S8 102 aa22.35■■□□□ 1.17
U2AF1-201ENST00000291552 ATAD3BQ5T9A4 648 aa22.35■■□□□ 1.17
U2AF1-201ENST00000291552 TMPPEQ6ZT21 453 aa22.35■■□□□ 1.17
U2AF1-201ENST00000291552 Q6ZT83 130 aa22.35■■□□□ 1.17
U2AF1-201ENST00000291552 TMEM171Q8WVE6 324 aa22.35■■□□□ 1.17
U2AF1-201ENST00000291552 KISS1RQ969F8 398 aaPredicted RBP22.35■■□□□ 1.17
U2AF1-201ENST00000291552 POTEKPQ9BYX7 375 aa22.35■■□□□ 1.17
U2AF1-201ENST00000291552 KCNK9Q9NPC2 374 aa22.35■■□□□ 1.17
U2AF1-201ENST00000291552 CTPS2Q9NRF8 586 aa22.35■■□□□ 1.17
U2AF1-201ENST00000291552 MARCOQ9UEW3 520 aaPredicted RBP22.35■■□□□ 1.17
U2AF1-201ENST00000291552 SLC35A3Q9Y2D2 325 aa22.35■■□□□ 1.17
U2AF1-201ENST00000291552 HMGN4O00479 90 aa22.34■■□□□ 1.17
U2AF1-201ENST00000291552 SMAD7O15105 426 aaKnown RBP22.34■■□□□ 1.17
U2AF1-201ENST00000291552 CDKN2CP42773 168 aa22.34■■□□□ 1.17
U2AF1-201ENST00000291552 WDR4P57081 412 aaKnown RBP22.34■■□□□ 1.17
U2AF1-201ENST00000291552 CHRNEQ04844 493 aa22.34■■□□□ 1.17
U2AF1-201ENST00000291552 ITGADQ13349 1161 aa22.34■■□□□ 1.17
U2AF1-201ENST00000291552 ADAM5Q6NVV9 412 aa22.34■■□□□ 1.17
U2AF1-201ENST00000291552 BHLHA15Q7RTS1 189 aaPredicted RBP22.34■■□□□ 1.17
U2AF1-201ENST00000291552 OIT3Q8WWZ8 545 aa22.34■■□□□ 1.17
U2AF1-201ENST00000291552 TMEM234Q8WY98 164 aa22.34■■□□□ 1.17
U2AF1-201ENST00000291552 NEUROG1Q92886 237 aa22.34■■□□□ 1.17
U2AF1-201ENST00000291552 INPP5KQ9BT40 448 aa22.34■■□□□ 1.17
U2AF1-201ENST00000291552 BDH2Q9BUT1 245 aa22.34■■□□□ 1.17
U2AF1-201ENST00000291552 BTNL2Q9UIR0 455 aa22.34■■□□□ 1.17
U2AF1-201ENST00000291552 RNF115Q9Y4L5 304 aa22.34■■□□□ 1.17
U2AF1-201ENST00000291552 CR1P17927 2039 aa22.33■■□□□ 1.17
U2AF1-201ENST00000291552 ZNF724A8MTY0 619 aa22.33■■□□□ 1.17
U2AF1-201ENST00000291552 LYZL6O75951 148 aa22.33■■□□□ 1.17
U2AF1-201ENST00000291552 S100A3P33764 101 aa22.33■■□□□ 1.17
U2AF1-201ENST00000291552 CHI3L1P36222 383 aaPredicted RBP22.33■■□□□ 1.17
U2AF1-201ENST00000291552 RNF130Q86XS8 419 aa22.33■■□□□ 1.17
U2AF1-201ENST00000291552 ANKFN1Q8N957 763 aa22.33■■□□□ 1.17
U2AF1-201ENST00000291552 VPS37AQ8NEZ2 397 aa22.33■■□□□ 1.17
U2AF1-201ENST00000291552 HSD17B8Q92506 261 aa22.33■■□□□ 1.17
U2AF1-201ENST00000291552 CNOT9Q92600 299 aaKnown RBP22.33■■□□□ 1.17
U2AF1-201ENST00000291552 ARL8AQ96BM9 186 aa22.33■■□□□ 1.17
U2AF1-201ENST00000291552 DNAJA3Q96EY1 480 aa22.33■■□□□ 1.17
U2AF1-201ENST00000291552 ARL5BQ96KC2 179 aa22.33■■□□□ 1.17
U2AF1-201ENST00000291552 SERINC1Q9NRX5 453 aa22.33■■□□□ 1.17
U2AF1-201ENST00000291552 SONP18583 2426 aaKnown RBP22.32■■□□□ 1.16
U2AF1-201ENST00000291552 SULT2B1O00204 365 aa22.32■■□□□ 1.16
U2AF1-201ENST00000291552 CNOT4O95628 575 aaKnown RBP22.32■■□□□ 1.16
U2AF1-201ENST00000291552 CHRM4P08173 479 aa22.32■■□□□ 1.16
U2AF1-201ENST00000291552 COX5AP20674 150 aa22.32■■□□□ 1.16
U2AF1-201ENST00000291552 RYKP34925 604 aa22.32■■□□□ 1.16
U2AF1-201ENST00000291552 CAPRIN1Q14444 709 aaKnown RBP22.32■■□□□ 1.16
U2AF1-201ENST00000291552 SYPL1Q16563 259 aa22.32■■□□□ 1.16
U2AF1-201ENST00000291552 KIRREL3Q8IZU9 778 aa22.32■■□□□ 1.16
U2AF1-201ENST00000291552 ANKRD42Q8N9B4 389 aa22.32■■□□□ 1.16
U2AF1-201ENST00000291552 PIWIL2Q8TC59 973 aaKnown RBP22.32■■□□□ 1.16
U2AF1-201ENST00000291552 SLC25A43Q8WUT9 341 aaPredicted RBP22.32■■□□□ 1.16
U2AF1-201ENST00000291552 SLC38A1Q9H2H9 487 aa22.32■■□□□ 1.16
U2AF1-201ENST00000291552 EXOSC3Q9NQT5 275 aaKnown RBP22.32■■□□□ 1.16
U2AF1-201ENST00000291552 CHRNA9Q9UGM1 479 aa22.32■■□□□ 1.16
U2AF1-201ENST00000291552 LAMP3Q9UQV4 416 aa22.32■■□□□ 1.16
U2AF1-201ENST00000291552 GPR45Q9Y5Y3 372 aa22.32■■□□□ 1.16
U2AF1-201ENST00000291552 IGKV3D-15A0A087WSY6 115 aa22.31■■□□□ 1.16
U2AF1-201ENST00000291552 DPRXA6NFQ7 191 aa22.31■■□□□ 1.16
U2AF1-201ENST00000291552 ZNF716A6NP11 495 aa22.31■■□□□ 1.16
U2AF1-201ENST00000291552 AP3D1O14617 1153 aa22.31■■□□□ 1.16
U2AF1-201ENST00000291552 CLOCKO15516 846 aa22.31■■□□□ 1.16
U2AF1-201ENST00000291552 DANCRP0C864 163 aa22.31■■□□□ 1.16
U2AF1-201ENST00000291552 IGHV1-2P23083 117 aa22.31■■□□□ 1.16
U2AF1-201ENST00000291552 APOBEC1P41238 236 aaKnown RBP22.31■■□□□ 1.16
U2AF1-201ENST00000291552 KCNJ10P78508 379 aa22.31■■□□□ 1.16
U2AF1-201ENST00000291552 BSPH1Q075Z2 132 aa22.31■■□□□ 1.16
U2AF1-201ENST00000291552 GPAT3Q53EU6 434 aa22.31■■□□□ 1.16
U2AF1-201ENST00000291552 KBTBD8Q8NFY9 601 aa22.31■■□□□ 1.16
U2AF1-201ENST00000291552 PAIP2Q9BPZ3 127 aaKnown RBP22.31■■□□□ 1.16
U2AF1-201ENST00000291552 OR11A1Q9GZK7 315 aa22.31■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms