RNA–Protein interactions for RNA: ENST00000288344.14

HMGN1-201, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 1,303 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-201ENST00000288344 TMEM19Q96HH6 336 aa8.21□□□□□ -1.1
HMGN1-201ENST00000288344 ZFP3Q96NJ6 502 aa8.21□□□□□ -1.1
HMGN1-201ENST00000288344 TRIB1Q96RU8 372 aa8.21□□□□□ -1.1
HMGN1-201ENST00000288344 WFDC6Q9BQY6 131 aa8.21□□□□□ -1.1
HMGN1-201ENST00000288344 MYLK2Q9H1R3 596 aa8.21□□□□□ -1.1
HMGN1-201ENST00000288344 KAT8Q9H7Z6 458 aaKnown RBP8.21□□□□□ -1.1
HMGN1-201ENST00000288344 ST6GALNAC1Q9NSC7 600 aaPredicted RBP8.21□□□□□ -1.1
HMGN1-201ENST00000288344 RLIMQ9NVW2 624 aa8.21□□□□□ -1.1
HMGN1-201ENST00000288344 THUMPD1Q9NXG2 353 aaKnown RBP8.21□□□□□ -1.1
HMGN1-201ENST00000288344 COQ3Q9NZJ6 369 aa8.21□□□□□ -1.1
HMGN1-201ENST00000288344 SLC35A3Q9Y2D2 325 aa8.21□□□□□ -1.1
HMGN1-201ENST00000288344 NDUFAF1Q9Y375 327 aa8.21□□□□□ -1.1
HMGN1-201ENST00000288344 ZNF175Q9Y473 711 aa8.21□□□□□ -1.1
HMGN1-201ENST00000288344 ALPK2Q86TB3 2170 aa8.21□□□□□ -1.1
HMGN1-201ENST00000288344 MAP1AP78559 2803 aaPredicted RBP8.2□□□□□ -1.1
HMGN1-201ENST00000288344 H3BNH8 94 aa8.2□□□□□ -1.1
HMGN1-201ENST00000288344 NR5A2O00482 541 aa8.2□□□□□ -1.1
HMGN1-201ENST00000288344 AP3D1O14617 1153 aa8.2□□□□□ -1.1
HMGN1-201ENST00000288344 GMFGO60234 142 aa8.2□□□□□ -1.1
HMGN1-201ENST00000288344 TPST2O60704 377 aa8.2□□□□□ -1.1
HMGN1-201ENST00000288344 CRHP06850 196 aa8.2□□□□□ -1.1
HMGN1-201ENST00000288344 DBIP07108 87 aaKnown RBP8.2□□□□□ -1.1
HMGN1-201ENST00000288344 UBTFL6P0CB48 400 aaPredicted RBP8.2□□□□□ -1.1
HMGN1-201ENST00000288344 PRG2P13727 222 aa8.2□□□□□ -1.1
HMGN1-201ENST00000288344 ETS2P15036 469 aa8.2□□□□□ -1.1
HMGN1-201ENST00000288344 HPGDP15428 266 aa8.2□□□□□ -1.1
HMGN1-201ENST00000288344 POU3F2P20265 443 aaPredicted RBP8.2□□□□□ -1.1
HMGN1-201ENST00000288344 DRD4P21917 467 aa8.2□□□□□ -1.1
HMGN1-201ENST00000288344 TCEA1P23193 301 aaKnown RBP8.2□□□□□ -1.1
HMGN1-201ENST00000288344 CRATP43155 626 aa8.2□□□□□ -1.1
HMGN1-201ENST00000288344 H3F3AP84243 136 aa8.2□□□□□ -1.1
HMGN1-201ENST00000288344 EPS8Q12929 822 aa8.2□□□□□ -1.1
HMGN1-201ENST00000288344 SLC25A35Q3KQZ1 300 aa8.2□□□□□ -1.1
HMGN1-201ENST00000288344 GPAT3Q53EU6 434 aa8.2□□□□□ -1.1
HMGN1-201ENST00000288344 RPS26P11Q5JNZ5 115 aaPredicted RBP8.2□□□□□ -1.1
HMGN1-201ENST00000288344 C6orf10Q5SRN2 563 aa8.2□□□□□ -1.1
HMGN1-201ENST00000288344 RNF220Q5VTB9 566 aa8.2□□□□□ -1.1
HMGN1-201ENST00000288344 NANOGP8Q6NSW7 305 aa8.2□□□□□ -1.1
HMGN1-201ENST00000288344 PLEKHM3Q6ZWE6 761 aa8.2□□□□□ -1.1
HMGN1-201ENST00000288344 PIGWQ7Z7B1 504 aa8.2□□□□□ -1.1
HMGN1-201ENST00000288344 VRK2Q86Y07 508 aa8.2□□□□□ -1.1
HMGN1-201ENST00000288344 LILRA2Q8N149 483 aa8.2□□□□□ -1.1
HMGN1-201ENST00000288344 OR10D3Q8NH80 312 aa8.2□□□□□ -1.1
HMGN1-201ENST00000288344 FNDC9Q8TBE3 224 aa8.2□□□□□ -1.1
HMGN1-201ENST00000288344 SLC35B4Q969S0 331 aa8.2□□□□□ -1.1
HMGN1-201ENST00000288344 DTNBP1Q96EV8 351 aa8.2□□□□□ -1.1
HMGN1-201ENST00000288344 CHMP6Q96FZ7 201 aa8.2□□□□□ -1.1
HMGN1-201ENST00000288344 CGREF1Q99674 301 aa8.2□□□□□ -1.1
HMGN1-201ENST00000288344 TM9SF2Q99805 663 aa8.2□□□□□ -1.1
HMGN1-201ENST00000288344 GPATCH1Q9BRR8 931 aaKnown RBP8.2□□□□□ -1.1
HMGN1-201ENST00000288344 NANOGQ9H9S0 305 aa8.2□□□□□ -1.1
HMGN1-201ENST00000288344 KCNJ16Q9NPI9 418 aa8.2□□□□□ -1.1
HMGN1-201ENST00000288344 PLSCR4Q9NRQ2 329 aa8.2□□□□□ -1.1
HMGN1-201ENST00000288344 P2RX2Q9UBL9 471 aa8.2□□□□□ -1.1
HMGN1-201ENST00000288344 LEF1Q9UJU2 399 aaPredicted RBP8.2□□□□□ -1.1
HMGN1-201ENST00000288344 TRIM33Q9UPN9 1127 aa8.2□□□□□ -1.1
HMGN1-201ENST00000288344 CELSR1Q9NYQ6 3014 aa8.2□□□□□ -1.1
HMGN1-201ENST00000288344 AKAP6Q13023 2319 aa8.19□□□□□ -1.1
HMGN1-201ENST00000288344 TMEM238LA0A1B0GVL6 79 aa8.19□□□□□ -1.1
HMGN1-201ENST00000288344 A0A1W2PNV4 684 aa8.19□□□□□ -1.1
HMGN1-201ENST00000288344 H0Y3Z8 333 aa8.19□□□□□ -1.1
HMGN1-201ENST00000288344 H3BML4 177 aa8.19□□□□□ -1.1
HMGN1-201ENST00000288344 GTPBP1O00178 669 aaKnown RBP8.19□□□□□ -1.1
HMGN1-201ENST00000288344 DYNC1I1O14576 645 aa8.19□□□□□ -1.1
HMGN1-201ENST00000288344 SLC22A2O15244 555 aa8.19□□□□□ -1.1
HMGN1-201ENST00000288344 HNRNPRO43390 633 aaKnown RBP8.19□□□□□ -1.1
HMGN1-201ENST00000288344 SNX3O60493 162 aa8.19□□□□□ -1.1
HMGN1-201ENST00000288344 TPST1O60507 370 aa8.19□□□□□ -1.1
HMGN1-201ENST00000288344 NPIPB7O75200 414 aa8.19□□□□□ -1.1
HMGN1-201ENST00000288344 MFN2O95140 757 aa8.19□□□□□ -1.1
HMGN1-201ENST00000288344 ANP32DO95626 131 aa8.19□□□□□ -1.1
HMGN1-201ENST00000288344 NPPAP01160 153 aa8.19□□□□□ -1.1
HMGN1-201ENST00000288344 OPN1LWP04000 364 aa8.19□□□□□ -1.1
HMGN1-201ENST00000288344 VIMP08670 466 aaKnown RBP8.19□□□□□ -1.1
HMGN1-201ENST00000288344 NR2F1P10589 423 aa8.19□□□□□ -1.1
HMGN1-201ENST00000288344 KLK2P20151 261 aa8.19□□□□□ -1.1
HMGN1-201ENST00000288344 LSP1P33241 339 aa8.19□□□□□ -1.1
HMGN1-201ENST00000288344 NTF4P34130 210 aa8.19□□□□□ -1.1
HMGN1-201ENST00000288344 ANXA11P50995 505 aaKnown RBP8.19□□□□□ -1.1
HMGN1-201ENST00000288344 AGFG1P52594 562 aaKnown RBP8.19□□□□□ -1.1
HMGN1-201ENST00000288344 CRISP3P54108 245 aa8.19□□□□□ -1.1
HMGN1-201ENST00000288344 GYS2P54840 703 aa8.19□□□□□ -1.1
HMGN1-201ENST00000288344 EEFSECP57772 596 aaKnown RBP8.19□□□□□ -1.1
HMGN1-201ENST00000288344 CBFBQ13951 182 aa8.19□□□□□ -1.1
HMGN1-201ENST00000288344 PON3Q15166 354 aa8.19□□□□□ -1.1
HMGN1-201ENST00000288344 HSP90B2PQ58FF3 399 aa8.19□□□□□ -1.1
HMGN1-201ENST00000288344 MRPL2Q5T653 305 aaKnown RBP8.19□□□□□ -1.1
HMGN1-201ENST00000288344 ZNF474Q6S9Z5 364 aaPredicted RBP8.19□□□□□ -1.1
HMGN1-201ENST00000288344 ZNF836Q6ZNA1 936 aa8.19□□□□□ -1.1
HMGN1-201ENST00000288344 OR10Q1Q8NGQ4 319 aa8.19□□□□□ -1.1
HMGN1-201ENST00000288344 OR52P1PQ8NH57 321 aa8.19□□□□□ -1.1
HMGN1-201ENST00000288344 OR2V1Q8NHB1 315 aa8.19□□□□□ -1.1
HMGN1-201ENST00000288344 OSTF1Q92882 214 aa8.19□□□□□ -1.1
HMGN1-201ENST00000288344 C14orf79Q96F83 325 aa8.19□□□□□ -1.1
HMGN1-201ENST00000288344 ZNF583Q96ND8 569 aa8.19□□□□□ -1.1
HMGN1-201ENST00000288344 SPATA9Q9BWV2 254 aa8.19□□□□□ -1.1
HMGN1-201ENST00000288344 SRXN1Q9BYN0 137 aa8.19□□□□□ -1.1
HMGN1-201ENST00000288344 CALML5Q9NZT1 146 aa8.19□□□□□ -1.1
HMGN1-201ENST00000288344 SLC22A20A6NK97 555 aa8.18□□□□□ -1.1
HMGN1-201ENST00000288344 J3QW42 95 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms