RNA–Protein interactions for RNA: ENST00000286349.3

TRIM42-201, Transcript of tripartite motif containing 42, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM42, Length 2,539 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM42-201ENST00000286349 DUSP15Q9H1R2 295 aaPredicted RBP7.03□□□□□ -1.28
TRIM42-201ENST00000286349 OR51I1Q9H343 314 aa7.03□□□□□ -1.28
TRIM42-201ENST00000286349 NIT2Q9NQR4 276 aa7.03□□□□□ -1.28
TRIM42-201ENST00000286349 TREM2Q9NZC2 230 aa7.03□□□□□ -1.28
TRIM42-201ENST00000286349 SLC9A8Q9Y2E8 581 aa7.03□□□□□ -1.28
TRIM42-201ENST00000286349 SPACA6W5XKT8 324 aa7.03□□□□□ -1.28
TRIM42-201ENST00000286349 A0A1W2PR48 441 aa7.03□□□□□ -1.28
TRIM42-201ENST00000286349 DUXAA6NLW8 204 aa7.03□□□□□ -1.28
TRIM42-201ENST00000286349 PTGES3LE9PB15 166 aa7.03□□□□□ -1.28
TRIM42-201ENST00000286349 BTN3A3O00478 584 aa7.03□□□□□ -1.28
TRIM42-201ENST00000286349 FAAHO00519 579 aa7.03□□□□□ -1.28
TRIM42-201ENST00000286349 SIGLEC6O43699 453 aa7.03□□□□□ -1.28
TRIM42-201ENST00000286349 ERAL1O75616 437 aaKnown RBP7.03□□□□□ -1.28
TRIM42-201ENST00000286349 SOX30O94993 753 aa7.03□□□□□ -1.28
TRIM42-201ENST00000286349 IFNA2P01563 188 aa7.03□□□□□ -1.28
TRIM42-201ENST00000286349 IFNGP01579 166 aa7.03□□□□□ -1.28
TRIM42-201ENST00000286349 CRHP06850 196 aa7.03□□□□□ -1.28
TRIM42-201ENST00000286349 NR2F6P10588 404 aa7.03□□□□□ -1.28
TRIM42-201ENST00000286349 HNF1AP20823 631 aa7.03□□□□□ -1.28
TRIM42-201ENST00000286349 PCMT1P22061 227 aa7.03□□□□□ -1.28
TRIM42-201ENST00000286349 AK4P27144 223 aaPredicted RBP7.03□□□□□ -1.28
TRIM42-201ENST00000286349 ERP29P30040 261 aaKnown RBP7.03□□□□□ -1.28
TRIM42-201ENST00000286349 THBS2P35442 1172 aa7.03□□□□□ -1.28
TRIM42-201ENST00000286349 MLLT10P55197 1068 aa7.03□□□□□ -1.28
TRIM42-201ENST00000286349 CDC42P60953 191 aa7.03□□□□□ -1.28
TRIM42-201ENST00000286349 TCF15Q12870 199 aa7.03□□□□□ -1.28
TRIM42-201ENST00000286349 ZNF800Q2TB10 664 aaPredicted RBP eCLIP7.03□□□□□ -1.28
TRIM42-201ENST00000286349 PRRT3Q5FWE3 981 aa7.03□□□□□ -1.28
TRIM42-201ENST00000286349 ACER2Q5QJU3 275 aa7.03□□□□□ -1.28
TRIM42-201ENST00000286349 ZNF385CQ66K41 422 aaPredicted RBP7.03□□□□□ -1.28
TRIM42-201ENST00000286349 CDC73Q6P1J9 531 aa7.03□□□□□ -1.28
TRIM42-201ENST00000286349 Q6ZSR6 202 aa7.03□□□□□ -1.28
TRIM42-201ENST00000286349 GID4Q8IVV7 300 aa7.03□□□□□ -1.28
TRIM42-201ENST00000286349 SLC5A8Q8N695 610 aa7.03□□□□□ -1.28
TRIM42-201ENST00000286349 PRSS33Q8NF86 280 aa7.03□□□□□ -1.28
TRIM42-201ENST00000286349 APOBEC4Q8WW27 367 aaKnown RBP7.03□□□□□ -1.28
TRIM42-201ENST00000286349 FKBP10Q96AY3 582 aa7.03□□□□□ -1.28
TRIM42-201ENST00000286349 PFDN5Q99471 154 aa7.03□□□□□ -1.28
TRIM42-201ENST00000286349 TREX2Q9BQ50 279 aaPredicted RBP7.03□□□□□ -1.28
TRIM42-201ENST00000286349 POTEKPQ9BYX7 375 aa7.03□□□□□ -1.28
TRIM42-201ENST00000286349 CCDC90BQ9GZT6 254 aa7.03□□□□□ -1.28
TRIM42-201ENST00000286349 LHPPQ9H008 270 aa7.03□□□□□ -1.28
TRIM42-201ENST00000286349 SDHAF2Q9NX18 166 aa7.03□□□□□ -1.28
TRIM42-201ENST00000286349 C5AR2Q9P296 337 aa7.03□□□□□ -1.28
TRIM42-201ENST00000286349 TRPC4Q9UBN4 977 aa7.03□□□□□ -1.28
TRIM42-201ENST00000286349 NDRG3Q9UGV2 375 aa7.03□□□□□ -1.28
TRIM42-201ENST00000286349 APOBEC3BQ9UH17 382 aaKnown RBP7.03□□□□□ -1.28
TRIM42-201ENST00000286349 FBXW2Q9UKT8 454 aa7.03□□□□□ -1.28
TRIM42-201ENST00000286349 CES1P1Q9UKY3 287 aa7.03□□□□□ -1.28
TRIM42-201ENST00000286349 MGAT4BQ9UQ53 548 aa7.03□□□□□ -1.28
TRIM42-201ENST00000286349 ATG4BQ9Y4P1 393 aa7.03□□□□□ -1.28
TRIM42-201ENST00000286349 PCDHGA6Q9Y5G7 932 aa7.03□□□□□ -1.28
TRIM42-201ENST00000286349 A0A1W2PN81 502 aa7.02□□□□□ -1.29
TRIM42-201ENST00000286349 H0Y8X5 98 aa7.02□□□□□ -1.29
TRIM42-201ENST00000286349 B3GALT2O43825 422 aa7.02□□□□□ -1.29
TRIM42-201ENST00000286349 ADRB1P08588 477 aa7.02□□□□□ -1.29
TRIM42-201ENST00000286349 IGFBP1P08833 259 aaPredicted RBP7.02□□□□□ -1.29
TRIM42-201ENST00000286349 HTR1AP08908 422 aa7.02□□□□□ -1.29
TRIM42-201ENST00000286349 IFI6P09912 130 aa7.02□□□□□ -1.29
TRIM42-201ENST00000286349 H2AFB1P0C5Y9 115 aa7.02□□□□□ -1.29
TRIM42-201ENST00000286349 H2AFB2P0C5Z0 115 aa7.02□□□□□ -1.29
TRIM42-201ENST00000286349 ZNF806P0C7X5 589 aa7.02□□□□□ -1.29
TRIM42-201ENST00000286349 OR12D1P0DN82 309 aa7.02□□□□□ -1.29
TRIM42-201ENST00000286349 IL7P13232 177 aa7.02□□□□□ -1.29
TRIM42-201ENST00000286349 GIFP27352 417 aa7.02□□□□□ -1.29
TRIM42-201ENST00000286349 CERS1P27544 350 aa7.02□□□□□ -1.29
TRIM42-201ENST00000286349 CHRNA7P36544 502 aa7.02□□□□□ -1.29
TRIM42-201ENST00000286349 OMPP47874 163 aa7.02□□□□□ -1.29
TRIM42-201ENST00000286349 RPS26P62854 115 aaKnown RBP7.02□□□□□ -1.29
TRIM42-201ENST00000286349 BTN3A2P78410 334 aa7.02□□□□□ -1.29
TRIM42-201ENST00000286349 TNFRSF17Q02223 184 aa7.02□□□□□ -1.29
TRIM42-201ENST00000286349 RPL6Q02878 288 aaKnown RBP7.02□□□□□ -1.29
TRIM42-201ENST00000286349 ZNHIT3Q15649 155 aaPredicted RBP7.02□□□□□ -1.29
TRIM42-201ENST00000286349 NDUFA9Q16795 377 aa7.02□□□□□ -1.29
TRIM42-201ENST00000286349 FAM214AQ32MH5 1076 aa7.02□□□□□ -1.29
TRIM42-201ENST00000286349 PLK5Q496M5 336 aa7.02□□□□□ -1.29
TRIM42-201ENST00000286349 Q5BKY6 102 aa7.02□□□□□ -1.29
TRIM42-201ENST00000286349 TRIM61Q5EBN2 209 aa7.02□□□□□ -1.29
TRIM42-201ENST00000286349 DCST1Q5T197 706 aa7.02□□□□□ -1.29
TRIM42-201ENST00000286349 SLC27A4Q6P1M0 643 aa7.02□□□□□ -1.29
TRIM42-201ENST00000286349 AMER3Q8N944 861 aa7.02□□□□□ -1.29
TRIM42-201ENST00000286349 CADM4Q8NFZ8 388 aa7.02□□□□□ -1.29
TRIM42-201ENST00000286349 XAGE5Q8WWM1 108 aa7.02□□□□□ -1.29
TRIM42-201ENST00000286349 RERGQ96A58 199 aaPredicted RBP7.02□□□□□ -1.29
TRIM42-201ENST00000286349 OR2A14Q96R47 310 aa7.02□□□□□ -1.29
TRIM42-201ENST00000286349 TMEM121BQ9BXQ6 578 aaPredicted RBP7.02□□□□□ -1.29
TRIM42-201ENST00000286349 CACYBPQ9HB71 228 aaKnown RBP7.02□□□□□ -1.29
TRIM42-201ENST00000286349 PLSCR3Q9NRY6 295 aa7.02□□□□□ -1.29
TRIM42-201ENST00000286349 TP53TG5Q9Y2B4 290 aa7.02□□□□□ -1.29
TRIM42-201ENST00000286349 RNF215Q9Y6U7 377 aa7.02□□□□□ -1.29
TRIM42-201ENST00000286349 KMT2EQ8IZD2 1858 aa7.02□□□□□ -1.29
TRIM42-201ENST00000286349 A0A0B4J293 547 aa7.02□□□□□ -1.29
TRIM42-201ENST00000286349 A0A0G2JN53 185 aa7.02□□□□□ -1.29
TRIM42-201ENST00000286349 TEX13CA0A0J9YWL9 993 aa7.02□□□□□ -1.29
TRIM42-201ENST00000286349 C9orf170A2RU37 121 aa7.02□□□□□ -1.29
TRIM42-201ENST00000286349 PRAMEF25A6NGN4 478 aa7.02□□□□□ -1.29
TRIM42-201ENST00000286349 SYT5O00445 386 aa7.02□□□□□ -1.29
TRIM42-201ENST00000286349 NUDT21O43809 227 aaKnown RBP7.02□□□□□ -1.29
TRIM42-201ENST00000286349 B4GALT2O60909 372 aa7.02□□□□□ -1.29
TRIM42-201ENST00000286349 WNT1P04628 370 aa7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms