RNA–Protein interactions for RNA: ENST00000266546.10

CLSTN3-201, Transcript of calsyntenin 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CLSTN3, Length 4,185 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-201ENST00000266546 ZBTB37Q5TC79 503 aa10.75□□□□□ -0.69
CLSTN3-201ENST00000266546 GKN2Q86XP6 184 aa10.75□□□□□ -0.69
CLSTN3-201ENST00000266546 GRAMD2AQ8IUY3 354 aa10.75□□□□□ -0.69
CLSTN3-201ENST00000266546 OR4K13Q8NH42 304 aa10.75□□□□□ -0.69
CLSTN3-201ENST00000266546 WDR20Q8TBZ3 569 aa10.75□□□□□ -0.69
CLSTN3-201ENST00000266546 CHTF18Q8WVB6 975 aa10.75□□□□□ -0.69
CLSTN3-201ENST00000266546 THAP4Q8WY91 577 aa10.75□□□□□ -0.69
CLSTN3-201ENST00000266546 LDHAL6BQ9BYZ2 381 aaPredicted RBP10.75□□□□□ -0.69
CLSTN3-201ENST00000266546 FZD3Q9NPG1 666 aa10.75□□□□□ -0.69
CLSTN3-201ENST00000266546 ASB6Q9NWX5 421 aa10.75□□□□□ -0.69
CLSTN3-201ENST00000266546 SLC7A7Q9UM01 511 aa10.75□□□□□ -0.69
CLSTN3-201ENST00000266546 TTC28Q96AY4 2481 aa10.75□□□□□ -0.69
CLSTN3-201ENST00000266546 CACNA1CQ13936 2221 aa10.74□□□□□ -0.69
CLSTN3-201ENST00000266546 A0A1W2PPC1 479 aa10.74□□□□□ -0.69
CLSTN3-201ENST00000266546 SLC9B1P1A6NJY1 282 aa10.74□□□□□ -0.69
CLSTN3-201ENST00000266546 ACOT7O00154 380 aa10.74□□□□□ -0.69
CLSTN3-201ENST00000266546 FOXE1O00358 373 aaPredicted RBP10.74□□□□□ -0.69
CLSTN3-201ENST00000266546 TNFRSF10CO14798 259 aa10.74□□□□□ -0.69
CLSTN3-201ENST00000266546 CBLP22681 906 aa10.74□□□□□ -0.69
CLSTN3-201ENST00000266546 AHCYP23526 432 aa10.74□□□□□ -0.69
CLSTN3-201ENST00000266546 GDNFP39905 211 aa10.74□□□□□ -0.69
CLSTN3-201ENST00000266546 PRKXP51817 358 aa10.74□□□□□ -0.69
CLSTN3-201ENST00000266546 ID2Q02363 134 aa10.74□□□□□ -0.69
CLSTN3-201ENST00000266546 FCRLBQ6BAA4 426 aa10.74□□□□□ -0.69
CLSTN3-201ENST00000266546 SLCO4C1Q6ZQN7 724 aa10.74□□□□□ -0.69
CLSTN3-201ENST00000266546 NRROSQ86YC3 692 aa10.74□□□□□ -0.69
CLSTN3-201ENST00000266546 OR4K14Q8NGD5 310 aa10.74□□□□□ -0.69
CLSTN3-201ENST00000266546 BRIX1Q8TDN6 353 aaKnown RBP10.74□□□□□ -0.69
CLSTN3-201ENST00000266546 APH1BQ8WW43 257 aa10.74□□□□□ -0.69
CLSTN3-201ENST00000266546 LAMP5Q9UJQ1 280 aa10.74□□□□□ -0.69
CLSTN3-201ENST00000266546 HS3ST3A1Q9Y663 406 aa10.74□□□□□ -0.69
CLSTN3-201ENST00000266546 PLRG1O43660 514 aaKnown RBP10.74□□□□□ -0.69
CLSTN3-201ENST00000266546 NAT1P18440 290 aa10.74□□□□□ -0.69
CLSTN3-201ENST00000266546 TPMTP51580 245 aa10.74□□□□□ -0.69
CLSTN3-201ENST00000266546 B4GALNT1Q00973 533 aa10.74□□□□□ -0.69
CLSTN3-201ENST00000266546 MC2RQ01718 297 aa10.74□□□□□ -0.69
CLSTN3-201ENST00000266546 P2RY14Q15391 338 aa10.74□□□□□ -0.69
CLSTN3-201ENST00000266546 CCSMST1Q4G0I0 132 aa10.74□□□□□ -0.69
CLSTN3-201ENST00000266546 SMUG1Q53HV7 270 aa10.74□□□□□ -0.69
CLSTN3-201ENST00000266546 YIF1BQ5BJH7 314 aa10.74□□□□□ -0.69
CLSTN3-201ENST00000266546 APOOLQ6UXV4 268 aa10.74□□□□□ -0.69
CLSTN3-201ENST00000266546 RBM45Q8IUH3 476 aaKnown RBP10.74□□□□□ -0.69
CLSTN3-201ENST00000266546 ZNF454Q8N9F8 522 aa10.74□□□□□ -0.69
CLSTN3-201ENST00000266546 TMEM185AQ8NFB2 350 aa10.74□□□□□ -0.69
CLSTN3-201ENST00000266546 WDFY2Q96P53 400 aa10.74□□□□□ -0.69
CLSTN3-201ENST00000266546 ZNF416Q9BWM5 594 aa10.74□□□□□ -0.69
CLSTN3-201ENST00000266546 OR52D1Q9H346 318 aa10.74□□□□□ -0.69
CLSTN3-201ENST00000266546 A8MVJ9 347 aa10.74□□□□□ -0.69
CLSTN3-201ENST00000266546 GRPRP30550 384 aa10.74□□□□□ -0.69
CLSTN3-201ENST00000266546 GRK5P34947 590 aa10.74□□□□□ -0.69
CLSTN3-201ENST00000266546 SRP9P49458 86 aaKnown RBP10.74□□□□□ -0.69
CLSTN3-201ENST00000266546 ADPRHP54922 357 aa10.74□□□□□ -0.69
CLSTN3-201ENST00000266546 ENPP2Q13822 863 aa10.74□□□□□ -0.69
CLSTN3-201ENST00000266546 GAS6Q14393 721 aa10.74□□□□□ -0.69
CLSTN3-201ENST00000266546 TMEM196Q5HYL7 178 aa10.74□□□□□ -0.69
CLSTN3-201ENST00000266546 AGBL4Q5VU57 503 aa10.74□□□□□ -0.69
CLSTN3-201ENST00000266546 MEPCEQ7L2J0 689 aaKnown RBP10.74□□□□□ -0.69
CLSTN3-201ENST00000266546 SMPDL3BQ92485 455 aa10.74□□□□□ -0.69
CLSTN3-201ENST00000266546 ZMYND19Q96E35 227 aaPredicted RBP10.74□□□□□ -0.69
CLSTN3-201ENST00000266546 GABRG3Q99928 467 aa10.74□□□□□ -0.69
CLSTN3-201ENST00000266546 GPR174Q9BXC1 333 aa10.74□□□□□ -0.69
CLSTN3-201ENST00000266546 MTHFD2LQ9H903 347 aaPredicted RBP10.74□□□□□ -0.69
CLSTN3-201ENST00000266546 SYNPO2LQ9H987 977 aa10.74□□□□□ -0.69
CLSTN3-201ENST00000266546 PRDM9Q9NQV7 894 aa10.74□□□□□ -0.69
CLSTN3-201ENST00000266546 ACOXLQ9NUZ1 547 aa10.74□□□□□ -0.69
CLSTN3-201ENST00000266546 TMEM184CQ9NVA4 438 aa10.74□□□□□ -0.69
CLSTN3-201ENST00000266546 ALKBH4Q9NXW9 302 aa10.74□□□□□ -0.69
CLSTN3-201ENST00000266546 A0A0A6YYJ9 748 aa10.73□□□□□ -0.69
CLSTN3-201ENST00000266546 ANTXRLA6NF34 631 aa10.73□□□□□ -0.69
CLSTN3-201ENST00000266546 PSMD9O00233 223 aa10.73□□□□□ -0.69
CLSTN3-201ENST00000266546 CD6P30203 668 aa10.73□□□□□ -0.69
CLSTN3-201ENST00000266546 SLC6A12P48065 614 aa10.73□□□□□ -0.69
CLSTN3-201ENST00000266546 RAB5BP61020 215 aa10.73□□□□□ -0.69
CLSTN3-201ENST00000266546 ELOCQ15369 112 aa10.73□□□□□ -0.69
CLSTN3-201ENST00000266546 SSX1Q16384 188 aa10.73□□□□□ -0.69
CLSTN3-201ENST00000266546 TMEM35AQ53FP2 167 aa10.73□□□□□ -0.69
CLSTN3-201ENST00000266546 ARTNQ5T4W7 220 aa10.73□□□□□ -0.69
CLSTN3-201ENST00000266546 KLHL24Q6TFL4 600 aa10.73□□□□□ -0.69
CLSTN3-201ENST00000266546 KANSL1Q7Z3B3 1105 aa10.73□□□□□ -0.69
CLSTN3-201ENST00000266546 ATCAYQ86WG3 371 aa10.73□□□□□ -0.69
CLSTN3-201ENST00000266546 CAMKVQ8NCB2 501 aa10.73□□□□□ -0.69
CLSTN3-201ENST00000266546 SMRP1Q8NCR6 262 aa10.73□□□□□ -0.69
CLSTN3-201ENST00000266546 OR5K2Q8NHB8 316 aa10.73□□□□□ -0.69
CLSTN3-201ENST00000266546 ELP4Q96EB1 424 aa10.73□□□□□ -0.69
CLSTN3-201ENST00000266546 DPYSL5Q9BPU6 564 aa10.73□□□□□ -0.69
CLSTN3-201ENST00000266546 ATG5Q9H1Y0 275 aa10.73□□□□□ -0.69
CLSTN3-201ENST00000266546 OR2S2Q9NQN1 319 aa10.73□□□□□ -0.69
CLSTN3-201ENST00000266546 POT1Q9NUX5 634 aa10.73□□□□□ -0.69
CLSTN3-201ENST00000266546 SLC23A1Q9UHI7 598 aa10.73□□□□□ -0.69
CLSTN3-201ENST00000266546 MED16Q9Y2X0 877 aa10.73□□□□□ -0.69
CLSTN3-201ENST00000266546 MTCH2Q9Y6C9 303 aa10.73□□□□□ -0.69
CLSTN3-201ENST00000266546 hCG_1807616A0A1W2PRN6 198 aa10.73□□□□□ -0.69
CLSTN3-201ENST00000266546 TMEM202A6NGA9 273 aa10.73□□□□□ -0.69
CLSTN3-201ENST00000266546 F8W036 122 aa10.73□□□□□ -0.69
CLSTN3-201ENST00000266546 M0R036 132 aa10.73□□□□□ -0.69
CLSTN3-201ENST00000266546 MAS1P04201 325 aa10.73□□□□□ -0.69
CLSTN3-201ENST00000266546 GKN3PP0CG01 181 aa10.73□□□□□ -0.69
CLSTN3-201ENST00000266546 FCARP24071 287 aa10.73□□□□□ -0.69
CLSTN3-201ENST00000266546 OR3A2P47893 321 aa10.73□□□□□ -0.69
CLSTN3-201ENST00000266546 CEBPGP53567 150 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms