RNA–Protein interactions for RNA: ENST00000264883.7

NUP54-201, Transcript of nucleoporin 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP54, Length 2,367 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-201ENST00000264883 NPPBP16860 134 aa12.18□□□□□ -0.46
NUP54-201ENST00000264883 STAT5AP42229 794 aa12.18□□□□□ -0.46
NUP54-201ENST00000264883 MANEAQ5SRI9 462 aa12.18□□□□□ -0.46
NUP54-201ENST00000264883 C18orf63Q68DL7 685 aa12.18□□□□□ -0.46
NUP54-201ENST00000264883 NXPE4Q6UWF7 544 aa12.18□□□□□ -0.46
NUP54-201ENST00000264883 ARMC10Q8N2F6 343 aa12.18□□□□□ -0.46
NUP54-201ENST00000264883 SLC44A3Q8N4M1 653 aa12.18□□□□□ -0.46
NUP54-201ENST00000264883 MORN4Q8NDC4 146 aa12.18□□□□□ -0.46
NUP54-201ENST00000264883 OR5W2Q8NH69 310 aa12.18□□□□□ -0.46
NUP54-201ENST00000264883 THAP6Q8TBB0 222 aa12.18□□□□□ -0.46
NUP54-201ENST00000264883 ZNF480Q8WV37 535 aa12.18□□□□□ -0.46
NUP54-201ENST00000264883 MS4A4EQ96PG1 132 aa12.18□□□□□ -0.46
NUP54-201ENST00000264883 PBX4Q9BYU1 374 aa12.18□□□□□ -0.46
NUP54-201ENST00000264883 PIGMQ9H3S5 423 aa12.18□□□□□ -0.46
NUP54-201ENST00000264883 ABRACLQ9P1F3 81 aa12.18□□□□□ -0.46
NUP54-201ENST00000264883 MAFFQ9ULX9 164 aa12.18□□□□□ -0.46
NUP54-201ENST00000264883 NPFFR2Q9Y5X5 522 aa12.18□□□□□ -0.46
NUP54-201ENST00000264883 KIF26AQ9ULI4 1882 aaPredicted RBP12.17□□□□□ -0.46
NUP54-201ENST00000264883 TTLL8A6PVC2 850 aa12.17□□□□□ -0.46
NUP54-201ENST00000264883 F5H5P2 479 aa12.17□□□□□ -0.46
NUP54-201ENST00000264883 ST8SIA5O15466 376 aa12.17□□□□□ -0.46
NUP54-201ENST00000264883 LCMT2O60294 686 aaKnown RBP12.17□□□□□ -0.46
NUP54-201ENST00000264883 LILRB3O75022 631 aa12.17□□□□□ -0.46
NUP54-201ENST00000264883 TGFB1P01137 390 aa12.17□□□□□ -0.46
NUP54-201ENST00000264883 GP1BAP07359 652 aa12.17□□□□□ -0.46
NUP54-201ENST00000264883 ATF1P18846 271 aa12.17□□□□□ -0.46
NUP54-201ENST00000264883 BTF3P20290 206 aaKnown RBP12.17□□□□□ -0.46
NUP54-201ENST00000264883 IFNGR2P38484 337 aa12.17□□□□□ -0.46
NUP54-201ENST00000264883 H2BFSP57053 126 aa12.17□□□□□ -0.46
NUP54-201ENST00000264883 AP3S2P59780 193 aa12.17□□□□□ -0.46
NUP54-201ENST00000264883 UBE2IP63279 158 aaKnown RBP12.17□□□□□ -0.46
NUP54-201ENST00000264883 RAB33AQ14088 237 aa12.17□□□□□ -0.46
NUP54-201ENST00000264883 CCSMST1Q4G0I0 132 aa12.17□□□□□ -0.46
NUP54-201ENST00000264883 OR7E24Q6IFN5 339 aa12.17□□□□□ -0.46
NUP54-201ENST00000264883 SIRT6Q8N6T7 355 aa12.17□□□□□ -0.46
NUP54-201ENST00000264883 BOLLQ8N9W6 283 aaKnown RBP12.17□□□□□ -0.46
NUP54-201ENST00000264883 BBS1Q8NFJ9 593 aa12.17□□□□□ -0.46
NUP54-201ENST00000264883 OR52B4Q8NGK2 314 aa12.17□□□□□ -0.46
NUP54-201ENST00000264883 ABHD4Q8TB40 342 aa12.17□□□□□ -0.46
NUP54-201ENST00000264883 RXFP4Q8TDU9 374 aa12.17□□□□□ -0.46
NUP54-201ENST00000264883 LMLNQ96KR4 655 aa12.17□□□□□ -0.46
NUP54-201ENST00000264883 SLC22A12Q96S37 553 aa12.17□□□□□ -0.46
NUP54-201ENST00000264883 ORAI3Q9BRQ5 295 aa12.17□□□□□ -0.46
NUP54-201ENST00000264883 PLEKHA1Q9HB21 404 aa12.17□□□□□ -0.46
NUP54-201ENST00000264883 TRIM36Q9NQ86 728 aa12.17□□□□□ -0.46
NUP54-201ENST00000264883 MAN2C1Q9NTJ4 1040 aa12.17□□□□□ -0.46
NUP54-201ENST00000264883 ZFP57Q9NU63 452 aa12.17□□□□□ -0.46
NUP54-201ENST00000264883 P2RX2Q9UBL9 471 aa12.17□□□□□ -0.46
NUP54-201ENST00000264883 ENTPD4Q9Y227 616 aa12.17□□□□□ -0.46
NUP54-201ENST00000264883 PCDHGA5Q9Y5G8 931 aa12.17□□□□□ -0.46
NUP54-201ENST00000264883 UBE2QL1A1L167 161 aa12.16□□□□□ -0.46
NUP54-201ENST00000264883 TO15178 435 aa12.16□□□□□ -0.46
NUP54-201ENST00000264883 KHDRBS3O75525 346 aaKnown RBP12.16□□□□□ -0.46
NUP54-201ENST00000264883 KLHL18O94889 574 aa12.16□□□□□ -0.46
NUP54-201ENST00000264883 AKR7A3O95154 331 aa12.16□□□□□ -0.46
NUP54-201ENST00000264883 RPA2P15927 270 aa12.16□□□□□ -0.46
NUP54-201ENST00000264883 TBXA2RP21731 343 aa12.16□□□□□ -0.46
NUP54-201ENST00000264883 ACHEP22303 614 aa12.16□□□□□ -0.46
NUP54-201ENST00000264883 HTR1FP30939 366 aa12.16□□□□□ -0.46
NUP54-201ENST00000264883 PPM1AP35813 382 aa12.16□□□□□ -0.46
NUP54-201ENST00000264883 DCDP81605 110 aaKnown RBP12.16□□□□□ -0.46
NUP54-201ENST00000264883 SLC7A9P82251 487 aa12.16□□□□□ -0.46
NUP54-201ENST00000264883 PRSS53Q2L4Q9 553 aa12.16□□□□□ -0.46
NUP54-201ENST00000264883 LINC00303Q3SY05 128 aa12.16□□□□□ -0.46
NUP54-201ENST00000264883 HEPHL1Q6MZM0 1159 aa12.16□□□□□ -0.46
NUP54-201ENST00000264883 USP53Q70EK8 1073 aa12.16□□□□□ -0.46
NUP54-201ENST00000264883 GJD3Q8N144 294 aa12.16□□□□□ -0.46
NUP54-201ENST00000264883 OR51G2Q8NGK0 314 aa12.16□□□□□ -0.46
NUP54-201ENST00000264883 RAB8BQ92930 207 aa12.16□□□□□ -0.46
NUP54-201ENST00000264883 ALG8Q9BVK2 526 aa12.16□□□□□ -0.46
NUP54-201ENST00000264883 OR51I1Q9H343 314 aa12.16□□□□□ -0.46
NUP54-201ENST00000264883 H2AFY2Q9P0M6 372 aaPredicted RBP12.16□□□□□ -0.46
NUP54-201ENST00000264883 TSPAN11A1L157 253 aa12.16□□□□□ -0.46
NUP54-201ENST00000264883 TMEM202A6NGA9 273 aa12.16□□□□□ -0.46
NUP54-201ENST00000264883 EFCAB7A8K855 629 aa12.16□□□□□ -0.46
NUP54-201ENST00000264883 ANHXE9PGG2 379 aa12.16□□□□□ -0.46
NUP54-201ENST00000264883 IGHV2-70P01814 119 aa12.16□□□□□ -0.46
NUP54-201ENST00000264883 FGBP02675 491 aa12.16□□□□□ -0.46
NUP54-201ENST00000264883 MGMTP16455 207 aa12.16□□□□□ -0.46
NUP54-201ENST00000264883 PPP2R1BP30154 601 aa12.16□□□□□ -0.46
NUP54-201ENST00000264883 FRKP42685 505 aaPredicted RBP12.16□□□□□ -0.46
NUP54-201ENST00000264883 SLC3A1Q07837 685 aa12.16□□□□□ -0.46
NUP54-201ENST00000264883 KRT33BQ14525 404 aa12.16□□□□□ -0.46
NUP54-201ENST00000264883 TRAM1Q15629 374 aa12.16□□□□□ -0.46
NUP54-201ENST00000264883 MAPK14Q16539 360 aa12.16□□□□□ -0.46
NUP54-201ENST00000264883 COL13A1Q5TAT6 717 aaPredicted RBP12.16□□□□□ -0.46
NUP54-201ENST00000264883 FAM83HQ6ZRV2 1179 aaPredicted RBP12.16□□□□□ -0.46
NUP54-201ENST00000264883 HSD11B1LQ7Z5J1 315 aa12.16□□□□□ -0.46
NUP54-201ENST00000264883 RASGEF1AQ8N9B8 481 aa12.16□□□□□ -0.46
NUP54-201ENST00000264883 OR9A1PQ8NGU1 263 aa12.16□□□□□ -0.46
NUP54-201ENST00000264883 OR52I2Q8NH67 350 aa12.16□□□□□ -0.46
NUP54-201ENST00000264883 EDARADDQ8WWZ3 215 aa12.16□□□□□ -0.46
NUP54-201ENST00000264883 BADQ92934 168 aa12.16□□□□□ -0.46
NUP54-201ENST00000264883 GCDHQ92947 438 aaPredicted RBP12.16□□□□□ -0.46
NUP54-201ENST00000264883 SCAMP4Q969E2 229 aa12.16□□□□□ -0.46
NUP54-201ENST00000264883 GLYATL1Q969I3 302 aa12.16□□□□□ -0.46
NUP54-201ENST00000264883 SLC25A28Q96A46 364 aa12.16□□□□□ -0.46
NUP54-201ENST00000264883 JAM3Q9BX67 310 aa12.16□□□□□ -0.46
NUP54-201ENST00000264883 TEX12Q9BXU0 123 aa12.16□□□□□ -0.46
NUP54-201ENST00000264883 CXXC1Q9P0U4 656 aaPredicted RBP12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms