RNA–Protein interactions for RNA: ENST00000264039.6

GPC1-201, Transcript of glypican 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC1, Length 3,713 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-201ENST00000264039 OR9A1PQ8NGU1 263 aa15.15■□□□□ 0.02
GPC1-201ENST00000264039 ZCCHC10Q8TBK6 192 aa15.15■□□□□ 0.02
GPC1-201ENST00000264039 TMEM169Q96HH4 297 aa15.15■□□□□ 0.02
GPC1-201ENST00000264039 VRK1Q99986 396 aaPredicted RBP15.15■□□□□ 0.02
GPC1-201ENST00000264039 TRIP12Q14669 1992 aaPredicted RBP15.14■□□□□ 0.01
GPC1-201ENST00000264039 SLC22A31A6NKX4 558 aa15.14■□□□□ 0.01
GPC1-201ENST00000264039 OIP5O43482 229 aa15.14■□□□□ 0.01
GPC1-201ENST00000264039 POP4O95707 220 aaKnown RBP15.14■□□□□ 0.01
GPC1-201ENST00000264039 RPN2P04844 631 aa15.14■□□□□ 0.01
GPC1-201ENST00000264039 SNRNP70P08621 437 aaKnown RBP15.14■□□□□ 0.01
GPC1-201ENST00000264039 MPC1LP0DKB6 136 aa15.14■□□□□ 0.01
GPC1-201ENST00000264039 FOSL1P15407 271 aa15.14■□□□□ 0.01
GPC1-201ENST00000264039 TEAD1P28347 426 aa15.14■□□□□ 0.01
GPC1-201ENST00000264039 ZP1P60852 638 aa15.14■□□□□ 0.01
GPC1-201ENST00000264039 ADAM5Q6NVV9 412 aa15.14■□□□□ 0.01
GPC1-201ENST00000264039 MEPCEQ7L2J0 689 aaKnown RBP15.14■□□□□ 0.01
GPC1-201ENST00000264039 HSD11B1LQ7Z5J1 315 aa15.14■□□□□ 0.01
GPC1-201ENST00000264039 NR2C2APQ86WQ0 139 aa15.14■□□□□ 0.01
GPC1-201ENST00000264039 FAM181AQ8N9Y4 354 aa15.14■□□□□ 0.01
GPC1-201ENST00000264039 CD300LFQ8TDQ1 290 aa15.14■□□□□ 0.01
GPC1-201ENST00000264039 C14orf79Q96F83 325 aa15.14■□□□□ 0.01
GPC1-201ENST00000264039 SF3B6Q9Y3B4 125 aaKnown RBP15.14■□□□□ 0.01
GPC1-201ENST00000264039 A0A0B4J2A0 478 aa15.14■□□□□ 0.01
GPC1-201ENST00000264039 ITGA10O75578 1167 aa15.14■□□□□ 0.01
GPC1-201ENST00000264039 DCNP07585 359 aaKnown RBP15.14■□□□□ 0.01
GPC1-201ENST00000264039 PTBP1P26599 531 aaKnown RBP eCLIP15.14■□□□□ 0.01
GPC1-201ENST00000264039 PPT1P50897 306 aa15.14■□□□□ 0.01
GPC1-201ENST00000264039 OR2B8PP59922 312 aa15.14■□□□□ 0.01
GPC1-201ENST00000264039 ST8SIA6P61647 398 aa15.14■□□□□ 0.01
GPC1-201ENST00000264039 CAP1Q01518 475 aa15.14■□□□□ 0.01
GPC1-201ENST00000264039 BAMBIQ13145 260 aa15.14■□□□□ 0.01
GPC1-201ENST00000264039 PON3Q15166 354 aa15.14■□□□□ 0.01
GPC1-201ENST00000264039 FNDC3BQ53EP0 1204 aaKnown RBP15.14■□□□□ 0.01
GPC1-201ENST00000264039 RGS7BPQ6MZT1 257 aaPredicted RBP15.14■□□□□ 0.01
GPC1-201ENST00000264039 CD163Q86VB7 1156 aa15.14■□□□□ 0.01
GPC1-201ENST00000264039 LRRC56Q8IYG6 542 aaPredicted RBP15.14■□□□□ 0.01
GPC1-201ENST00000264039 WDR77Q9BQA1 342 aaPredicted RBP15.14■□□□□ 0.01
GPC1-201ENST00000264039 KXD1Q9BQD3 176 aa15.14■□□□□ 0.01
GPC1-201ENST00000264039 FGF20Q9NP95 211 aaPredicted RBP15.14■□□□□ 0.01
GPC1-201ENST00000264039 DZANK1Q9NVP4 752 aa15.14■□□□□ 0.01
GPC1-201ENST00000264039 TESQ9UGI8 421 aaKnown RBP15.14■□□□□ 0.01
GPC1-201ENST00000264039 SHPKQ9UHJ6 478 aa15.14■□□□□ 0.01
GPC1-201ENST00000264039 TP53BP1Q12888 1972 aaPredicted RBP15.14■□□□□ 0.01
GPC1-201ENST00000264039 AKR1A1P14550 325 aa15.14■□□□□ 0.01
GPC1-201ENST00000264039 GABRA1P14867 456 aa15.14■□□□□ 0.01
GPC1-201ENST00000264039 CCND3P30281 292 aaPredicted RBP15.14■□□□□ 0.01
GPC1-201ENST00000264039 HTR1FP30939 366 aa15.14■□□□□ 0.01
GPC1-201ENST00000264039 MC3RP41968 323 aa15.14■□□□□ 0.01
GPC1-201ENST00000264039 GXYLT1Q4G148 440 aa15.14■□□□□ 0.01
GPC1-201ENST00000264039 MANEAQ5SRI9 462 aa15.14■□□□□ 0.01
GPC1-201ENST00000264039 FAM71E1Q6IPT2 247 aa15.14■□□□□ 0.01
GPC1-201ENST00000264039 KIAA1211LQ6NV74 962 aa15.14■□□□□ 0.01
GPC1-201ENST00000264039 SUN3Q8TAQ9 357 aa15.14■□□□□ 0.01
GPC1-201ENST00000264039 CXorf40BQ96DE9 158 aa15.14■□□□□ 0.01
GPC1-201ENST00000264039 CNTNAP3BQ96NU0 1288 aa15.14■□□□□ 0.01
GPC1-201ENST00000264039 FN3KQ9H479 309 aa15.14■□□□□ 0.01
GPC1-201ENST00000264039 MYNNQ9NPC7 610 aa15.14■□□□□ 0.01
GPC1-201ENST00000264039 ACSS1Q9NUB1 689 aaPredicted RBP15.14■□□□□ 0.01
GPC1-201ENST00000264039 CACNB4O00305 520 aaPredicted RBP15.13■□□□□ 0.01
GPC1-201ENST00000264039 KCNAB3O43448 404 aa15.13■□□□□ 0.01
GPC1-201ENST00000264039 PRKAR2AP13861 404 aaKnown RBP15.13■□□□□ 0.01
GPC1-201ENST00000264039 AKR1C4P17516 323 aa15.13■□□□□ 0.01
GPC1-201ENST00000264039 CSF2RBP32927 897 aa15.13■□□□□ 0.01
GPC1-201ENST00000264039 TAS2R43P59537 309 aa15.13■□□□□ 0.01
GPC1-201ENST00000264039 RBMS2Q15434 407 aaKnown RBP15.13■□□□□ 0.01
GPC1-201ENST00000264039 GUCA2BQ16661 112 aa15.13■□□□□ 0.01
GPC1-201ENST00000264039 TMEM201Q5SNT2 666 aa15.13■□□□□ 0.01
GPC1-201ENST00000264039 SPRYD7Q5W111 196 aa15.13■□□□□ 0.01
GPC1-201ENST00000264039 SLC24A5Q71RS6 500 aa15.13■□□□□ 0.01
GPC1-201ENST00000264039 OR1M1Q8NGA1 313 aa15.13■□□□□ 0.01
GPC1-201ENST00000264039 OR52N1Q8NH53 320 aa15.13■□□□□ 0.01
GPC1-201ENST00000264039 ATG5Q9H1Y0 275 aa15.13■□□□□ 0.01
GPC1-201ENST00000264039 MEPEQ9NQ76 525 aaPredicted RBP15.13■□□□□ 0.01
GPC1-201ENST00000264039 ADARB2Q9NS39 739 aaKnown RBP15.13■□□□□ 0.01
GPC1-201ENST00000264039 CLEC4EQ9ULY5 219 aa15.13■□□□□ 0.01
GPC1-201ENST00000264039 OTPQ5XKR4 325 aa15.13■□□□□ 0.01
GPC1-201ENST00000264039 RANBP3LQ86VV4 465 aaPredicted RBP15.13■□□□□ 0.01
GPC1-201ENST00000264039 RAB42Q8N4Z0 105 aa15.13■□□□□ 0.01
GPC1-201ENST00000264039 OR4E2Q8NGC2 313 aa15.13■□□□□ 0.01
GPC1-201ENST00000264039 PLD4Q96BZ4 506 aa15.13■□□□□ 0.01
GPC1-201ENST00000264039 SLC6A7Q99884 636 aa15.13■□□□□ 0.01
GPC1-201ENST00000264039 SEC16AO15027 2179 aa15.13■□□□□ 0.01
GPC1-201ENST00000264039 M0QYG6 137 aa15.13■□□□□ 0.01
GPC1-201ENST00000264039 LATO43561 262 aa15.13■□□□□ 0.01
GPC1-201ENST00000264039 DPM1O60762 260 aa15.13■□□□□ 0.01
GPC1-201ENST00000264039 RCBTB2O95199 551 aa15.13■□□□□ 0.01
GPC1-201ENST00000264039 IFNA6P05013 189 aa15.13■□□□□ 0.01
GPC1-201ENST00000264039 MPIP34949 423 aa15.13■□□□□ 0.01
GPC1-201ENST00000264039 SQSTM1Q13501 440 aa15.13■□□□□ 0.01
GPC1-201ENST00000264039 NHLRC3Q5JS37 347 aa15.13■□□□□ 0.01
GPC1-201ENST00000264039 ZNF770Q6IQ21 691 aaPredicted RBP15.13■□□□□ 0.01
GPC1-201ENST00000264039 FIGNL1Q6PIW4 674 aa15.13■□□□□ 0.01
GPC1-201ENST00000264039 ACOT11Q8WXI4 607 aaPredicted RBP15.13■□□□□ 0.01
GPC1-201ENST00000264039 RGMAQ96B86 450 aa15.13■□□□□ 0.01
GPC1-201ENST00000264039 TGIF2Q9GZN2 237 aa15.13■□□□□ 0.01
GPC1-201ENST00000264039 ASH2LQ9UBL3 628 aa15.13■□□□□ 0.01
GPC1-201ENST00000264039 A0A0C4DFX4 3053 aa15.12■□□□□ 0.01
GPC1-201ENST00000264039 GAPDHSO14556 408 aaPredicted RBP15.12■□□□□ 0.01
GPC1-201ENST00000264039 UGDHO60701 494 aa15.12■□□□□ 0.01
GPC1-201ENST00000264039 VNN2O95498 520 aa15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms