RNA–Protein interactions for RNA: ENST00000262327.9

LIG3-201, Transcript of DNA ligase 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LIG3, Length 3,055 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-201ENST00000262327 ZNF655Q8N720 491 aaPredicted RBP9.3□□□□□ -0.92
LIG3-201ENST00000262327 DOCK8Q8NF50 2099 aa9.3□□□□□ -0.92
LIG3-201ENST00000262327 OR52L1Q8NGH7 329 aa9.3□□□□□ -0.92
LIG3-201ENST00000262327 ABHD4Q8TB40 342 aa9.3□□□□□ -0.92
LIG3-201ENST00000262327 SFXN5Q8TD22 340 aa9.3□□□□□ -0.92
LIG3-201ENST00000262327 ZNF431Q8TF32 576 aaPredicted RBP9.3□□□□□ -0.92
LIG3-201ENST00000262327 CD180Q99467 661 aa9.3□□□□□ -0.92
LIG3-201ENST00000262327 GSDMCQ9BYG8 508 aa9.3□□□□□ -0.92
LIG3-201ENST00000262327 NIPAL2Q9H841 368 aa9.3□□□□□ -0.92
LIG3-201ENST00000262327 NT5DC2Q9H857 520 aa9.3□□□□□ -0.92
LIG3-201ENST00000262327 ZC4H2Q9NQZ6 224 aa9.3□□□□□ -0.92
LIG3-201ENST00000262327 CYSLTR2Q9NS75 346 aa9.3□□□□□ -0.92
LIG3-201ENST00000262327 ASB6Q9NWX5 421 aa9.3□□□□□ -0.92
LIG3-201ENST00000262327 NLGN3Q9NZ94 848 aa9.3□□□□□ -0.92
LIG3-201ENST00000262327 GLTPQ9NZD2 209 aa9.3□□□□□ -0.92
LIG3-201ENST00000262327 THAP10Q9P2Z0 257 aaPredicted RBP9.3□□□□□ -0.92
LIG3-201ENST00000262327 KCNE5Q9UJ90 142 aa9.3□□□□□ -0.92
LIG3-201ENST00000262327 CACNG2Q9Y698 323 aa9.3□□□□□ -0.92
LIG3-201ENST00000262327 TRIOO75962 3097 aa9.3□□□□□ -0.92
LIG3-201ENST00000262327 PRUNE2Q8WUY3 3088 aa9.3□□□□□ -0.92
LIG3-201ENST00000262327 TOR1AO14656 332 aa9.3□□□□□ -0.92
LIG3-201ENST00000262327 SLC19A2O60779 497 aa9.3□□□□□ -0.92
LIG3-201ENST00000262327 FZD7O75084 574 aa9.3□□□□□ -0.92
LIG3-201ENST00000262327 KAT7O95251 611 aa9.3□□□□□ -0.92
LIG3-201ENST00000262327 TNFRSF4P43489 277 aa9.3□□□□□ -0.92
LIG3-201ENST00000262327 GPR85P60893 370 aa9.3□□□□□ -0.92
LIG3-201ENST00000262327 OR1Q1Q15612 314 aa9.3□□□□□ -0.92
LIG3-201ENST00000262327 PLA1AQ53H76 456 aa9.3□□□□□ -0.92
LIG3-201ENST00000262327 METAP1DQ6UB28 335 aaPredicted RBP9.3□□□□□ -0.92
LIG3-201ENST00000262327 VN1R4Q7Z5H5 301 aa9.3□□□□□ -0.92
LIG3-201ENST00000262327 ZAR1Q86SH2 424 aa9.3□□□□□ -0.92
LIG3-201ENST00000262327 SIAH3Q8IW03 269 aa9.3□□□□□ -0.92
LIG3-201ENST00000262327 GALNT11Q8NCW6 608 aa9.3□□□□□ -0.92
LIG3-201ENST00000262327 CCL4L1Q8NHW4 92 aa9.3□□□□□ -0.92
LIG3-201ENST00000262327 ZMYND19Q96E35 227 aaPredicted RBP9.3□□□□□ -0.92
LIG3-201ENST00000262327 PTCHD1Q96NR3 888 aa9.3□□□□□ -0.92
LIG3-201ENST00000262327 TEAD3Q99594 435 aa9.3□□□□□ -0.92
LIG3-201ENST00000262327 ZNF559Q9BR84 538 aa9.3□□□□□ -0.92
LIG3-201ENST00000262327 RPP25Q9BUL9 199 aaKnown RBP9.3□□□□□ -0.92
LIG3-201ENST00000262327 FN3KQ9H479 309 aa9.3□□□□□ -0.92
LIG3-201ENST00000262327 TRIM36Q9NQ86 728 aa9.3□□□□□ -0.92
LIG3-201ENST00000262327 MRPL39Q9NYK5 338 aaKnown RBP9.3□□□□□ -0.92
LIG3-201ENST00000262327 AK6Q9Y3D8 172 aaKnown RBP9.3□□□□□ -0.92
LIG3-201ENST00000262327 CIB4A0PJX0 185 aa9.3□□□□□ -0.92
LIG3-201ENST00000262327 LRRN3E7EW58 273 aa9.3□□□□□ -0.92
LIG3-201ENST00000262327 PRR23D1E9PI22 279 aaPredicted RBP9.3□□□□□ -0.92
LIG3-201ENST00000262327 HMGN1P05114 100 aa9.3□□□□□ -0.92
LIG3-201ENST00000262327 ANKRD34CP0C6C1 535 aa9.3□□□□□ -0.92
LIG3-201ENST00000262327 PRR23D2P0DMB1 279 aaPredicted RBP9.3□□□□□ -0.92
LIG3-201ENST00000262327 PTHLHP12272 177 aa9.3□□□□□ -0.92
LIG3-201ENST00000262327 AHCYP23526 432 aa9.3□□□□□ -0.92
LIG3-201ENST00000262327 PRKAR1BP31321 381 aa9.3□□□□□ -0.92
LIG3-201ENST00000262327 ACSL1P33121 698 aa9.3□□□□□ -0.92
LIG3-201ENST00000262327 FOXK2Q01167 660 aa9.3□□□□□ -0.92
LIG3-201ENST00000262327 POU4F3Q15319 338 aa9.3□□□□□ -0.92
LIG3-201ENST00000262327 ACSM3Q53FZ2 586 aa9.3□□□□□ -0.92
LIG3-201ENST00000262327 NRROSQ86YC3 692 aa9.3□□□□□ -0.92
LIG3-201ENST00000262327 SERPINA12Q8IW75 414 aa9.3□□□□□ -0.92
LIG3-201ENST00000262327 LRRC17Q8N6Y2 441 aa9.3□□□□□ -0.92
LIG3-201ENST00000262327 OR2L8Q8NGY9 312 aa9.3□□□□□ -0.92
LIG3-201ENST00000262327 TMEM239Q8WW34 195 aa9.3□□□□□ -0.92
LIG3-201ENST00000262327 GHSRQ92847 366 aa9.3□□□□□ -0.92
LIG3-201ENST00000262327 KISS1RQ969F8 398 aaPredicted RBP9.3□□□□□ -0.92
LIG3-201ENST00000262327 CREB3L1Q96BA8 519 aa9.3□□□□□ -0.92
LIG3-201ENST00000262327 HS6ST2Q96MM7 605 aa9.3□□□□□ -0.92
LIG3-201ENST00000262327 SDF2Q99470 211 aa9.3□□□□□ -0.92
LIG3-201ENST00000262327 GTPBP2Q9BX10 602 aaKnown RBP9.3□□□□□ -0.92
LIG3-201ENST00000262327 C1QTNF2Q9BXJ5 285 aa9.3□□□□□ -0.92
LIG3-201ENST00000262327 LRRN3Q9H3W5 708 aa9.3□□□□□ -0.92
LIG3-201ENST00000262327 ACSL5Q9ULC5 683 aa9.3□□□□□ -0.92
LIG3-201ENST00000262327 TP53BP1Q12888 1972 aaPredicted RBP9.29□□□□□ -0.92
LIG3-201ENST00000262327 TRANK1O15050 2925 aa9.29□□□□□ -0.92
LIG3-201ENST00000262327 MUC22E2RYF6 1773 aaPredicted RBP9.29□□□□□ -0.92
LIG3-201ENST00000262327 TEX13CA0A0J9YWL9 993 aa9.29□□□□□ -0.92
LIG3-201ENST00000262327 J3QRE1 110 aa9.29□□□□□ -0.92
LIG3-201ENST00000262327 P2RX6O15547 441 aa9.29□□□□□ -0.92
LIG3-201ENST00000262327 CEACAM5P06731 702 aa9.29□□□□□ -0.92
LIG3-201ENST00000262327 ADRB1P08588 477 aa9.29□□□□□ -0.92
LIG3-201ENST00000262327 ZNF250P15622 560 aa9.29□□□□□ -0.92
LIG3-201ENST00000262327 GRPRP30550 384 aa9.29□□□□□ -0.92
LIG3-201ENST00000262327 PSMB10P40306 273 aa9.29□□□□□ -0.92
LIG3-201ENST00000262327 MTNR1BP49286 362 aa9.29□□□□□ -0.92
LIG3-201ENST00000262327 RUNX2Q13950 521 aa9.29□□□□□ -0.92
LIG3-201ENST00000262327 ZNF267Q14586 743 aaPredicted RBP9.29□□□□□ -0.92
LIG3-201ENST00000262327 RPE65Q16518 533 aa9.29□□□□□ -0.92
LIG3-201ENST00000262327 TIGD3Q6B0B8 471 aa9.29□□□□□ -0.92
LIG3-201ENST00000262327 SFRP4Q6FHJ7 346 aaPredicted RBP9.29□□□□□ -0.92
LIG3-201ENST00000262327 OAFQ86UD1 273 aa9.29□□□□□ -0.92
LIG3-201ENST00000262327 LRRC28Q86X40 367 aaPredicted RBP9.29□□□□□ -0.92
LIG3-201ENST00000262327 LRRC25Q8N386 305 aaPredicted RBP9.29□□□□□ -0.92
LIG3-201ENST00000262327 OR5T3Q8NGG3 340 aa9.29□□□□□ -0.92
LIG3-201ENST00000262327 OR10G6Q8NH81 332 aa9.29□□□□□ -0.92
LIG3-201ENST00000262327 OR14C36Q8NHC7 312 aa9.29□□□□□ -0.92
LIG3-201ENST00000262327 LCN9Q8WX39 176 aa9.29□□□□□ -0.92
LIG3-201ENST00000262327 DPCDQ9BVM2 203 aaPredicted RBP9.29□□□□□ -0.92
LIG3-201ENST00000262327 GPR174Q9BXC1 333 aa9.29□□□□□ -0.92
LIG3-201ENST00000262327 AUNIPQ9H7T9 357 aa9.29□□□□□ -0.92
LIG3-201ENST00000262327 CACYBPQ9HB71 228 aaKnown RBP9.29□□□□□ -0.92
LIG3-201ENST00000262327 BRD7Q9NPI1 651 aa9.29□□□□□ -0.92
LIG3-201ENST00000262327 GMEB2Q9UKD1 530 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms