RNA–Protein interactions for RNA: ENST00000261811.5

CYSTM1-201, Transcript of cysteine rich transmembrane module containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CYSTM1, Length 1,336 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYSTM1-201ENST00000261811 KCTD14Q9BQ13 255 aaPredicted RBP16.89■□□□□ 0.29
CYSTM1-201ENST00000261811 PRRG4Q9BZD6 226 aa16.89■□□□□ 0.29
CYSTM1-201ENST00000261811 SELENONQ9NZV5 590 aa16.89■□□□□ 0.29
CYSTM1-201ENST00000261811 BAG5Q9UL15 447 aa16.89■□□□□ 0.29
CYSTM1-201ENST00000261811 MCTS1Q9ULC4 181 aaKnown RBP16.89■□□□□ 0.29
CYSTM1-201ENST00000261811 INTS1Q8N201 2190 aaKnown RBP16.88■□□□□ 0.29
CYSTM1-201ENST00000261811 SLC22A20A6NK97 555 aa16.88■□□□□ 0.29
CYSTM1-201ENST00000261811 AP3D1O14617 1153 aa16.88■□□□□ 0.29
CYSTM1-201ENST00000261811 CXCR1P25024 350 aa16.88■□□□□ 0.29
CYSTM1-201ENST00000261811 CHRNB4P30926 498 aa16.88■□□□□ 0.29
CYSTM1-201ENST00000261811 EIF1AXP47813 144 aaKnown RBP16.88■□□□□ 0.29
CYSTM1-201ENST00000261811 CLK1P49759 484 aaKnown RBP16.88■□□□□ 0.29
CYSTM1-201ENST00000261811 SUCLG1P53597 346 aaKnown RBP16.88■□□□□ 0.29
CYSTM1-201ENST00000261811 CLDN20P56880 219 aa16.88■□□□□ 0.29
CYSTM1-201ENST00000261811 RGS8P57771 180 aaPredicted RBP16.88■□□□□ 0.29
CYSTM1-201ENST00000261811 TMEM176BQ3YBM2 270 aaPredicted RBP16.88■□□□□ 0.29
CYSTM1-201ENST00000261811 EEF1A1P5Q5VTE0 462 aa16.88■□□□□ 0.29
CYSTM1-201ENST00000261811 HBMQ6B0K9 141 aa16.88■□□□□ 0.29
CYSTM1-201ENST00000261811 OR2A2Q6IF42 318 aa16.88■□□□□ 0.29
CYSTM1-201ENST00000261811 SMYD1Q8NB12 490 aa16.88■□□□□ 0.29
CYSTM1-201ENST00000261811 OR2V1Q8NHB1 315 aa16.88■□□□□ 0.29
CYSTM1-201ENST00000261811 LZICQ8WZA0 190 aa16.88■□□□□ 0.29
CYSTM1-201ENST00000261811 PROX1Q92786 737 aa16.88■□□□□ 0.29
CYSTM1-201ENST00000261811 DDIT4LQ96D03 193 aa16.88■□□□□ 0.29
CYSTM1-201ENST00000261811 KLHDC3Q9BQ90 382 aa16.88■□□□□ 0.29
CYSTM1-201ENST00000261811 ZNF559Q9BR84 538 aa16.88■□□□□ 0.29
CYSTM1-201ENST00000261811 TRIM2Q9C040 744 aa16.88■□□□□ 0.29
CYSTM1-201ENST00000261811 TMEM185BQ9H7F4 350 aa16.88■□□□□ 0.29
CYSTM1-201ENST00000261811 ABCD2Q9UBJ2 740 aa16.88■□□□□ 0.29
CYSTM1-201ENST00000261811 TESQ9UGI8 421 aaKnown RBP16.88■□□□□ 0.29
CYSTM1-201ENST00000261811 CHRNA9Q9UGM1 479 aa16.88■□□□□ 0.29
CYSTM1-201ENST00000261811 ZNF175Q9Y473 711 aa16.88■□□□□ 0.29
CYSTM1-201ENST00000261811 SPTBN1Q01082 2364 aaKnown RBP16.88■□□□□ 0.29
CYSTM1-201ENST00000261811 USP9XQ93008 2570 aaPredicted RBP16.87■□□□□ 0.29
CYSTM1-201ENST00000261811 LRRK2Q5S007 2527 aa16.87■□□□□ 0.29
CYSTM1-201ENST00000261811 DOPEY2Q9Y3R5 2298 aa16.87■□□□□ 0.29
CYSTM1-201ENST00000261811 MBD3L4A6NDZ8 208 aaPredicted RBP16.87■□□□□ 0.29
CYSTM1-201ENST00000261811 MBD3L3A6NE82 208 aaPredicted RBP16.87■□□□□ 0.29
CYSTM1-201ENST00000261811 MBD3L5A6NJ08 208 aaPredicted RBP16.87■□□□□ 0.29
CYSTM1-201ENST00000261811 NME4O00746 187 aa16.87■□□□□ 0.29
CYSTM1-201ENST00000261811 ADAMDEC1O15204 470 aa16.87■□□□□ 0.29
CYSTM1-201ENST00000261811 TFPIP10646 304 aa16.87■□□□□ 0.29
CYSTM1-201ENST00000261811 ACAA2P42765 397 aaKnown RBP16.87■□□□□ 0.29
CYSTM1-201ENST00000261811 KCNJ5P48544 419 aa16.87■□□□□ 0.29
CYSTM1-201ENST00000261811 CARD18P57730 90 aa16.87■□□□□ 0.29
CYSTM1-201ENST00000261811 ADORA2A-AS1P86434 159 aa16.87■□□□□ 0.29
CYSTM1-201ENST00000261811 DMTNQ08495 405 aa16.87■□□□□ 0.29
CYSTM1-201ENST00000261811 GTF2IRD2BQ6EKJ0 949 aa16.87■□□□□ 0.29
CYSTM1-201ENST00000261811 PPP4R4Q6NUP7 873 aa16.87■□□□□ 0.29
CYSTM1-201ENST00000261811 TRPM8Q7Z2W7 1104 aa16.87■□□□□ 0.29
CYSTM1-201ENST00000261811 GTF2IRD2Q86UP8 949 aa16.87■□□□□ 0.29
CYSTM1-201ENST00000261811 GGNQ86UU5 652 aa16.87■□□□□ 0.29
CYSTM1-201ENST00000261811 OR52E4Q8NGH9 312 aa16.87■□□□□ 0.29
CYSTM1-201ENST00000261811 MBD3L2Q8NHZ7 208 aaPredicted RBP16.87■□□□□ 0.29
CYSTM1-201ENST00000261811 CPNE4Q96A23 557 aaPredicted RBP16.87■□□□□ 0.29
CYSTM1-201ENST00000261811 SDCCAG3Q96C92 435 aa16.87■□□□□ 0.29
CYSTM1-201ENST00000261811 NPAS1Q99742 590 aa16.87■□□□□ 0.29
CYSTM1-201ENST00000261811 TMEM27Q9HBJ8 222 aa16.87■□□□□ 0.29
CYSTM1-201ENST00000261811 CTPS2Q9NRF8 586 aa16.87■□□□□ 0.29
CYSTM1-201ENST00000261811 ADPRHL2Q9NX46 363 aa16.87■□□□□ 0.29
CYSTM1-201ENST00000261811 SLC9A8Q9Y2E8 581 aa16.87■□□□□ 0.29
CYSTM1-201ENST00000261811 CACNA1CQ13936 2221 aa16.87■□□□□ 0.29
CYSTM1-201ENST00000261811 TMED7-TICAM2A0A0A6YYA0 188 aa16.86■□□□□ 0.29
CYSTM1-201ENST00000261811 TNFSF11O14788 317 aa16.86■□□□□ 0.29
CYSTM1-201ENST00000261811 TPST1O60507 370 aa16.86■□□□□ 0.29
CYSTM1-201ENST00000261811 LGI1O95970 557 aa16.86■□□□□ 0.29
CYSTM1-201ENST00000261811 OPN1SWP03999 348 aa16.86■□□□□ 0.29
CYSTM1-201ENST00000261811 TACR3P29371 465 aa16.86■□□□□ 0.29
CYSTM1-201ENST00000261811 KDELR2P33947 212 aa16.86■□□□□ 0.29
CYSTM1-201ENST00000261811 GSK3BP49841 420 aa16.86■□□□□ 0.29
CYSTM1-201ENST00000261811 CSNK2A1P68400 391 aaPredicted RBP16.86■□□□□ 0.29
CYSTM1-201ENST00000261811 PLAURQ03405 335 aa16.86■□□□□ 0.29
CYSTM1-201ENST00000261811 SPATS1Q496A3 300 aa16.86■□□□□ 0.29
CYSTM1-201ENST00000261811 LRRC23Q53EV4 343 aaPredicted RBP16.86■□□□□ 0.29
CYSTM1-201ENST00000261811 SAMD4BQ5PRF9 694 aaKnown RBP16.86■□□□□ 0.29
CYSTM1-201ENST00000261811 ADGRE4PQ86SQ3 457 aa16.86■□□□□ 0.29
CYSTM1-201ENST00000261811 RPRMLQ8N4K4 120 aa16.86■□□□□ 0.29
CYSTM1-201ENST00000261811 MARVELD2Q8N4S9 558 aa16.86■□□□□ 0.29
CYSTM1-201ENST00000261811 OR10D3Q8NH80 312 aa16.86■□□□□ 0.29
CYSTM1-201ENST00000261811 DNAJA4Q8WW22 397 aaPredicted RBP16.86■□□□□ 0.29
CYSTM1-201ENST00000261811 ITLN2Q8WWU7 325 aaPredicted RBP16.86■□□□□ 0.29
CYSTM1-201ENST00000261811 OSTF1Q92882 214 aa16.86■□□□□ 0.29
CYSTM1-201ENST00000261811 TMEM181Q9P2C4 612 aa16.86■□□□□ 0.29
CYSTM1-201ENST00000261811 CLCF1Q9UBD9 225 aa16.86■□□□□ 0.29
CYSTM1-201ENST00000261811 RNF6Q9Y252 685 aa16.86■□□□□ 0.29
CYSTM1-201ENST00000261811 TMED7Q9Y3B3 224 aa16.86■□□□□ 0.29
CYSTM1-201ENST00000261811 CHST2Q9Y4C5 530 aa16.86■□□□□ 0.29
CYSTM1-201ENST00000261811 RELNP78509 3460 aa16.86■□□□□ 0.29
CYSTM1-201ENST00000261811 A0A0J9YW62 118 aa16.85■□□□□ 0.29
CYSTM1-201ENST00000261811 B2RBV5 119 aa16.85■□□□□ 0.29
CYSTM1-201ENST00000261811 CXCR6O00574 342 aa16.85■□□□□ 0.29
CYSTM1-201ENST00000261811 DVL2O14641 736 aa16.85■□□□□ 0.29
CYSTM1-201ENST00000261811 ZNF208O43345 1280 aa16.85■□□□□ 0.29
CYSTM1-201ENST00000261811 ADAM11O75078 769 aa16.85■□□□□ 0.29
CYSTM1-201ENST00000261811 OPN1LWP04000 364 aa16.85■□□□□ 0.29
CYSTM1-201ENST00000261811 FESP07332 822 aa16.85■□□□□ 0.29
CYSTM1-201ENST00000261811 IL11P20809 199 aa16.85■□□□□ 0.29
CYSTM1-201ENST00000261811 PON3Q15166 354 aa16.85■□□□□ 0.29
CYSTM1-201ENST00000261811 DUSP7Q16829 419 aa16.85■□□□□ 0.29
CYSTM1-201ENST00000261811 SYT14P1Q58G82 188 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms