RNA–Protein interactions for RNA: ENST00000261302.9

FOXN3-201, Transcript of forkhead box N3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene FOXN3, Length 2,542 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-201ENST00000261302 IRF4Q15306 451 aa11.75□□□□□ -0.53
FOXN3-201ENST00000261302 MAPK14Q16539 360 aa11.75□□□□□ -0.53
FOXN3-201ENST00000261302 FAM27D1Q5T7N8 215 aa11.75□□□□□ -0.53
FOXN3-201ENST00000261302 RAB12Q6IQ22 244 aa11.75□□□□□ -0.53
FOXN3-201ENST00000261302 ZNF546Q86UE3 836 aa11.75□□□□□ -0.53
FOXN3-201ENST00000261302 RASGEF1AQ8N9B8 481 aa11.75□□□□□ -0.53
FOXN3-201ENST00000261302 OR4D9Q8NGE8 314 aa11.75□□□□□ -0.53
FOXN3-201ENST00000261302 OR1J4Q8NGS1 313 aa11.75□□□□□ -0.53
FOXN3-201ENST00000261302 SNX33Q8WV41 574 aa11.75□□□□□ -0.53
FOXN3-201ENST00000261302 RFKQ969G6 155 aa11.75□□□□□ -0.53
FOXN3-201ENST00000261302 ARL11Q969Q4 196 aa11.75□□□□□ -0.53
FOXN3-201ENST00000261302 SMARCD1Q96GM5 515 aa11.75□□□□□ -0.53
FOXN3-201ENST00000261302 MESP1Q9BRJ9 268 aa11.75□□□□□ -0.53
FOXN3-201ENST00000261302 TRIM62Q9BVG3 475 aa11.75□□□□□ -0.53
FOXN3-201ENST00000261302 PINK1Q9BXM7 581 aa11.75□□□□□ -0.53
FOXN3-201ENST00000261302 TSPAN10Q9H1Z9 355 aaPredicted RBP11.75□□□□□ -0.53
FOXN3-201ENST00000261302 GFOD1Q9NXC2 390 aa11.75□□□□□ -0.53
FOXN3-201ENST00000261302 RUVBL1Q9Y265 456 aaKnown RBP11.75□□□□□ -0.53
FOXN3-201ENST00000261302 DOCK4Q8N1I0 1966 aa11.74□□□□□ -0.53
FOXN3-201ENST00000261302 CCDC88CQ9P219 2028 aa11.74□□□□□ -0.53
FOXN3-201ENST00000261302 ANKRD20A5PA0PJZ0 165 aa11.74□□□□□ -0.53
FOXN3-201ENST00000261302 PCDH8O95206 1070 aa11.74□□□□□ -0.53
FOXN3-201ENST00000261302 EPHX1P07099 455 aa11.74□□□□□ -0.53
FOXN3-201ENST00000261302 SNRPBP14678 240 aaKnown RBP11.74□□□□□ -0.53
FOXN3-201ENST00000261302 LPOP22079 712 aaPredicted RBP11.74□□□□□ -0.53
FOXN3-201ENST00000261302 TRAM1Q15629 374 aa11.74□□□□□ -0.53
FOXN3-201ENST00000261302 ZNF239Q16600 458 aaKnown RBP11.74□□□□□ -0.53
FOXN3-201ENST00000261302 FRG2Q64ET8 278 aa11.74□□□□□ -0.53
FOXN3-201ENST00000261302 TECPR1Q7Z6L1 1165 aa11.74□□□□□ -0.53
FOXN3-201ENST00000261302 PXKQ7Z7A4 578 aa11.74□□□□□ -0.53
FOXN3-201ENST00000261302 TMEM200AQ86VY9 491 aa11.74□□□□□ -0.53
FOXN3-201ENST00000261302 TMEM40Q8WWA1 233 aa11.74□□□□□ -0.53
FOXN3-201ENST00000261302 ECHDC3Q96DC8 303 aa11.74□□□□□ -0.53
FOXN3-201ENST00000261302 MARS2Q96GW9 593 aaKnown RBP11.74□□□□□ -0.53
FOXN3-201ENST00000261302 ZNF75AQ96N20 296 aa11.74□□□□□ -0.53
FOXN3-201ENST00000261302 FRG2BQ96QU4 278 aa11.74□□□□□ -0.53
FOXN3-201ENST00000261302 SLC35A5Q9BS91 424 aa11.74□□□□□ -0.53
FOXN3-201ENST00000261302 GULP1Q9UBP9 304 aa11.74□□□□□ -0.53
FOXN3-201ENST00000261302 TP53TG5Q9Y2B4 290 aa11.74□□□□□ -0.53
FOXN3-201ENST00000261302 GPR52Q9Y2T5 361 aa11.74□□□□□ -0.53
FOXN3-201ENST00000261302 SCN8AQ9UQD0 1980 aa11.74□□□□□ -0.53
FOXN3-201ENST00000261302 HSFX4A0A1B0GTS1 333 aaPredicted RBP11.74□□□□□ -0.53
FOXN3-201ENST00000261302 HSFX3A0A1B0GWH4 333 aaPredicted RBP11.74□□□□□ -0.53
FOXN3-201ENST00000261302 CACNB4O00305 520 aaPredicted RBP11.74□□□□□ -0.53
FOXN3-201ENST00000261302 PIP5K1CO60331 668 aa11.74□□□□□ -0.53
FOXN3-201ENST00000261302 RBBP9O75884 186 aa11.74□□□□□ -0.53
FOXN3-201ENST00000261302 OR2F2O95006 317 aa11.74□□□□□ -0.53
FOXN3-201ENST00000261302 EPXP11678 715 aa11.74□□□□□ -0.53
FOXN3-201ENST00000261302 RHOQP17081 205 aa11.74□□□□□ -0.53
FOXN3-201ENST00000261302 GJA1P17302 382 aa11.74□□□□□ -0.53
FOXN3-201ENST00000261302 ATF1P18846 271 aa11.74□□□□□ -0.53
FOXN3-201ENST00000261302 DGKAP23743 735 aa11.74□□□□□ -0.53
FOXN3-201ENST00000261302 MMP11P24347 488 aa11.74□□□□□ -0.53
FOXN3-201ENST00000261302 LILRA4P59901 499 aa11.74□□□□□ -0.53
FOXN3-201ENST00000261302 SMAD3P84022 425 aaKnown RBP11.74□□□□□ -0.53
FOXN3-201ENST00000261302 SKP2Q13309 424 aa11.74□□□□□ -0.53
FOXN3-201ENST00000261302 OR2F1Q13607 317 aa11.74□□□□□ -0.53
FOXN3-201ENST00000261302 ENTPD8Q5MY95 495 aa11.74□□□□□ -0.53
FOXN3-201ENST00000261302 OR52W1Q6IF63 320 aa11.74□□□□□ -0.53
FOXN3-201ENST00000261302 OR52I2Q8NH67 350 aa11.74□□□□□ -0.53
FOXN3-201ENST00000261302 RAB3CQ96E17 227 aa11.74□□□□□ -0.53
FOXN3-201ENST00000261302 PCED1BQ96HM7 432 aa11.74□□□□□ -0.53
FOXN3-201ENST00000261302 WRAP53Q9BUR4 548 aaKnown RBP11.74□□□□□ -0.53
FOXN3-201ENST00000261302 ADGRE3Q9BY15 652 aa11.74□□□□□ -0.53
FOXN3-201ENST00000261302 LMAN2LQ9H0V9 348 aa11.74□□□□□ -0.53
FOXN3-201ENST00000261302 LINC00597Q9H2U6 94 aa11.74□□□□□ -0.53
FOXN3-201ENST00000261302 TMEM185BQ9H7F4 350 aa11.74□□□□□ -0.53
FOXN3-201ENST00000261302 TMEM138Q9NPI0 162 aa11.74□□□□□ -0.53
FOXN3-201ENST00000261302 KLHL9Q9P2J3 617 aa11.74□□□□□ -0.53
FOXN3-201ENST00000261302 PISDQ9UG56 409 aa11.74□□□□□ -0.53
FOXN3-201ENST00000261302 CKAP5Q14008 2032 aa11.73□□□□□ -0.53
FOXN3-201ENST00000261302 URADA6NGE7 173 aa11.73□□□□□ -0.53
FOXN3-201ENST00000261302 TSPAN3O60637 253 aa11.73□□□□□ -0.53
FOXN3-201ENST00000261302 CD79AP11912 226 aa11.73□□□□□ -0.53
FOXN3-201ENST00000261302 CD52P31358 61 aa11.73□□□□□ -0.53
FOXN3-201ENST00000261302 ASMTP46597 345 aa11.73□□□□□ -0.53
FOXN3-201ENST00000261302 NRG3P56975 720 aa11.73□□□□□ -0.53
FOXN3-201ENST00000261302 HBA1P69905 142 aa11.73□□□□□ -0.53
FOXN3-201ENST00000261302 ARHGEF7Q14155 803 aa11.73□□□□□ -0.53
FOXN3-201ENST00000261302 DNLZQ5SXM8 178 aa11.73□□□□□ -0.53
FOXN3-201ENST00000261302 WSCD1Q658N2 575 aa11.73□□□□□ -0.53
FOXN3-201ENST00000261302 CDC73Q6P1J9 531 aa11.73□□□□□ -0.53
FOXN3-201ENST00000261302 ABHD13Q7L211 337 aa11.73□□□□□ -0.53
FOXN3-201ENST00000261302 LINGO2Q7L985 606 aa11.73□□□□□ -0.53
FOXN3-201ENST00000261302 CXXC5Q7LFL8 322 aaKnown RBP11.73□□□□□ -0.53
FOXN3-201ENST00000261302 LRRC70Q7Z2Q7 622 aa11.73□□□□□ -0.53
FOXN3-201ENST00000261302 TEX19Q8NA77 164 aa11.73□□□□□ -0.53
FOXN3-201ENST00000261302 OR4A4PQ8NGN8 299 aa11.73□□□□□ -0.53
FOXN3-201ENST00000261302 HMGB4Q8WW32 186 aa11.73□□□□□ -0.53
FOXN3-201ENST00000261302 TAAR9Q96RI9 348 aa11.73□□□□□ -0.53
FOXN3-201ENST00000261302 CIPCQ9C0C6 399 aa11.73□□□□□ -0.53
FOXN3-201ENST00000261302 TMEM248Q9NWD8 314 aa11.73□□□□□ -0.53
FOXN3-201ENST00000261302 RCC2Q9P258 522 aaKnown RBP11.73□□□□□ -0.53
FOXN3-201ENST00000261302 PADI3Q9ULW8 664 aa11.73□□□□□ -0.53
FOXN3-201ENST00000261302 PTPRSQ13332 1948 aa11.73□□□□□ -0.53
FOXN3-201ENST00000261302 PLXNA4Q9HCM2 1894 aa11.73□□□□□ -0.53
FOXN3-201ENST00000261302 H7C0S8 307 aa11.73□□□□□ -0.53
FOXN3-201ENST00000261302 ANXA2P07355 339 aaKnown RBP11.73□□□□□ -0.53
FOXN3-201ENST00000261302 GNSP15586 552 aa11.73□□□□□ -0.53
FOXN3-201ENST00000261302 HIST1H1BP16401 226 aaKnown RBP11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms